Balaenoptera musculus (blue whale): 118888312
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Entry
118888312 CDS
T09887
Symbol
PABPC5
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 5
KO
K13126
polyadenylate-binding protein
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03015
mRNA surveillance pathway
bmus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118888312 (PABPC5)
09123 Folding, sorting and degradation
03018 RNA degradation
118888312 (PABPC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118888312 (PABPC5)
03041 Spliceosome [BR:
bmus03041
]
118888312 (PABPC5)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118888312 (PABPC5)
mRNA cycle factors
Stress granule specific factors
118888312 (PABPC5)
Spliceosome [BR:
bmus03041
]
Complex C
Other components
Complex C specific factors
118888312 (PABPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RBD_RDR6
POP1_C
Motif
Other DBs
NCBI-GeneID:
118888312
NCBI-ProteinID:
XP_036695190
UniProt:
A0A8B8WFK6
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All DBs
Position
X:72326843..72328193
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AA seq
450 aa
AA seq
DB search
MSALVPHFETSSLYLGDLHPEVNEAMMYEKFSTAGPILSLRACRDLVTRRFLGXAHVNFL
LRADTEWTLDTTNFGIINGKPLRITWSQHDPSLCKSGVGNIFIKNLAKSIDDKSLYDTFS
VFGNIIFCKVVTDENGSRGFGFVHFEKSEAARRAIAKMNRILLKGSRVFAGQFKPRKERE
AELRAQANIFTNVYIKNFGDAIDDECLKEVLGEFGSVLSVRVMTDENGKSKSFGFVSFEN
FEKAQKTIEGMNGKVLNGNQVYVGRAQNKAERQSELKHKFEQIKQGKLTRCKGANLYVKN
LEDDIDNKXLRREFSLFGTITSTRVMMEAGCSKGFGFVSNTSPEEANKAVMAMNGKIVIT
KPLYVXLAQSKEEHQALLTKNYMERAVALKDGGYSILNTPKAAATSSCNCVPALPQLQCG
SAHLCKTVLRAKHHPSRVYWIFYPLSSNST
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctttggttccacactttgaaacgtcctcactgtaccttggagacctgcatccc
gaagtgaacgaggcaatgatgtatgagaaattcagcaccgccgggccaatcctgtccctt
agggcctgccgtgacctggttactcgccgcttcctgggctaggcgcatgtgaacttcttg
ctgcgggctgataccgagtggactctggacactacgaactttggtattatcaatggcaag
ccgctgcgtattacgtggtcccagcatgacccatcactttgtaagagtggagtgggcaat
atattcatcaaaaatcttgccaagtctattgatgacaagtccctttatgatacattttcc
gtctttggaaacattattttttgtaaagtagtaaccgatgaaaatggatcaaggggtttt
ggatttgtgcattttgagaagtcagaagccgctagaagagccattgcaaaaatgaatagg
attctgctgaaaggtagccgagtttttgctgggcagtttaaacctcgcaaagaaagggaa
gcagaactcagagctcaagcaaacatatttaccaatgtctacattaagaattttggagat
gctatagatgatgaatgtcttaaagaggttttaggtgagtttggttctgtattaagtgtg
agagttatgactgatgaaaatggaaaatccaaaagctttggatttgtgagttttgagaat
tttgaaaaagcccagaaaaccattgaaggaatgaatggaaaagtccttaatggaaatcaa
gtttatgttggtagagcacagaacaaagctgagagacagtctgaattaaaacacaaattt
gagcaaataaaacagggtaaactcaccaggtgcaagggtgctaatctttatgtgaaaaat
cttgaagatgatattgataataaatgactgagaagagaattctccctctttggcacaatc
actagtaccagggtcatgatggaggcaggctgcagcaaaggctttggctttgttagcaat
acatctcctgaggaagctaataaagccgtcatggcaatgaatggaaaaattgtgatcacc
aaaccactgtatgtgnngctggcacaaagcaaggaggagcaccaggctctcctcaccaag
aactatatggagagagcagtggctctgaaagatggaggttattctatactcaacactccc
aaggcagcagcaacatcatcatgtaactgtgtgcctgctcttcctcagcttcaatgtgga
agtgcacatctttgtaagactgtgctcagggccaaacatcatccatccagagtatattgg
atattctatccactcagcagcaacagcacctaa
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