Balaenoptera musculus (blue whale): 118889248
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Entry
118889248 CDS
T09887
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04151
PI3K-Akt signaling pathway
bmus04510
Focal adhesion
bmus04512
ECM-receptor interaction
bmus04820
Cytoskeleton in muscle cells
bmus04926
Relaxin signaling pathway
bmus04933
AGE-RAGE signaling pathway in diabetic complications
bmus04974
Protein digestion and absorption
bmus05146
Amoebiasis
bmus05165
Human papillomavirus infection
bmus05200
Pathways in cancer
bmus05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118889248 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118889248 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118889248 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118889248 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
118889248 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
118889248 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118889248 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
118889248 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
118889248 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
118889248 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
118889248 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bmus04147
]
118889248 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
bmus00536
]
118889248 (COL4A6)
Exosome [BR:
bmus04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
118889248 (COL4A6)
Glycosaminoglycan binding proteins [BR:
bmus00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118889248 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
118889248
NCBI-ProteinID:
XP_036696970
UniProt:
A0A8B8WL45
LinkDB
All DBs
Position
X:complement(91192116..91480791)
Genome browser
AA seq
1688 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKKPYGKPCGGQDCIGGCKCSPEKGARGRPGPIGIQGP
VGPQGFPGPSGLSGLKGERGSPGPLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGEPILAQGSFKGMKGEPGLPGLD
GITGPQGAPGSPGAVGPIGPPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGLQGFPGISGPPGLPGFGIAGEKGEKGIPGLPGPRG
PVGLEGVQGPPGSQGKKGSSGFPGLNGFPGIKGEKGDIGLPGPDVFIDTDGAVISGYPGD
PGMPGLPGLKGDEGIQGLPGPPGAPGLPALPGGPGALGLQGVPGLKGDQGNPGRTTIGAA
GLPGRDGLPGLPGLPGPPGPAFETGTLQSTEPGLPGLRGERGPKGNPGLKGIKGDSGFCA
CDGGVPNIGPPGEPGLPGPPGLLGLPGLKGTRGDPGSGGAQGPSGDPGVFGPRGLAGPRG
KKGEATLSTGSGLPGDQGDPGPQGLPGETGAPGKDGVPGLPGLPGFQGDGGQGFPGEKGL
PGLPGEKGRTGPIGPPGIGLPGSSGPRGLPGDKGVDGFPGQPGPPGIPGITLPCIIPGPY
GPSGFPGAPGFPGPNGARGLPGTPGQPGLRGNKGEPGSPGLVHLPELPGFPGPRGEKGLP
GFPGLPGKDGLPGKVGSPGLPGPKGAPGDIIGAENGAPGEQGLQGLPGGRGFPGDSGLTG
PKGLLGKSGLLGPKGERGSPGIPGRAGQLGPRGSGGLFGIKGKPGLPGAPGFPGTSGYPG
KKGPRGDIGPPASAGKRGLPGLKGLPGSPGLIGFLGNSGLPGATGLPGLPGPKGEKGSVG
LIGFPGIPGLPGIPGASGLKGIPGSAGRVGPSGQAGSPGVKGDRGDPGPVGVPSPRLPVL
NLHFTGDKGSQGSAGSIGFPGPRGDKGEAGRPGPPGLPGAPGFPSLIKGLSGRPGTPGST
GLRGLPGLKGSPGITGFPGIPGESGSQGLNGAPGLPGASGLPGLKGDQGQTLGISGSPGP
KGQPGEPGFKGVKGKDGPVGDVGFPGNKGEDGKVGISGDVGLPASPGLPGVAGMRGNPGL
PGSSGHPGAAGPLGPLGLIGTKGFPGLPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLP
GPKGEKGSLGIGIGAPGKPGMRGPKGSRGFPGLQGPAGLPGAPGLSLPSVIAGQPGDAGR
PGLDGERGRPGPPGPPGPPGPSSDQGDPGDPGFPGVPGPQGPKGDQGIPGFSGLPGELGL
KGMRGEPGFMGTPGKVGPPGDPGLPGMKGKAGPRGLSGPRGAPGQTPIAEDIQAPPGPMG
LTGIDGIPGLMGDPGVQGPGGLQGFKGLPGIPGKDGPNGLPGPPGALGDPGLPGLQGPPG
FEGAPGKPGPFGRAGVPGQSVRVGYTLVKHSQSEQVPLCPVGMSQLWVGYSLLFVEGQEK
AHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGQTQIPQ
YISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGS
CLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGEEPVSETLKAGQLHTRVSR
CQVCMKSV
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggcttctcctggttacgttgtgcctgaccgaggaactggcagga
gcgggagagaagaagccctatggcaagccatgtggaggccaagactgcattgggggctgt
aagtgctctcctgagaaaggagcccgagggcgaccaggaccaattggaattcaaggtcca
gtgggtcctcaaggatttcctggccctagtggtttatcagggttgaaaggagaaaggggc
tccccaggacctctgggaccgtatggaccaaaaggagataagggtcccatgggagttcct
ggctttcttggcatcaatgggattccgggccaccctggacagccagggcccagaggccca
cctggcctggatggctgtaatggaactcaaggagctgttggatttccaggccccgatggc
tatcccgggcttctcggaccacccgggcttcctggtcagaaaggctctaaaggtgaacct
atccttgcccaaggtagtttcaaaggaatgaagggggagcctgggctgcccggactggat
ggaatcactgggccacaaggagcacccggatctccaggagctgtgggacccataggacca
ccaggattgcaaggtcctccaggcccccctggtttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggggatgttggcctgcctggccctgcagga
cccccaccatctactggggaactggaattcatgggatttcccaaagggaagaaaggatcc
aagggtgaaccagggcttcagggcttcccaggaataagtggtcctccaggtctcccggga
tttggaattgctggagaaaaaggagaaaagggaatccctggtttgccgggacctaggggt
cccgtgggtttagaaggagtccaaggccctccagggagtcagggcaagaaggggtcttca
ggtttccccggacttaatggattcccaggaattaagggtgaaaagggtgacattggcctg
ccaggcccagatgttttcatcgatacagatggtgctgtgatctcaggttatcctggagac
cccggtatgccaggcctcccaggccttaaaggagatgaaggcatccagggcctgcctggc
cctcctggtgctcctggattaccagctttaccaggtggccccggtgctctagggctccag
ggagttccaggcctgaagggggaccaaggaaaccccggccgcaccacaattggggcagct
ggcctccctggcagagatggtttgccaggcctaccaggcctaccaggcccacccggtcca
gcatttgagacgggaactctacagagcacagagccagggttgcctggtctccgaggagaa
cgaggtccaaaaggaaacccaggcctcaaaggaatcaaaggggactcaggtttttgtgct
tgtgatggtggtgtcccaaacattggaccacctggggagccaggcctgcctgggccacca
ggtctcctgggccttccgggcctgaaaggaacgagaggagatccaggctctgggggtgca
cagggcccatcaggggatccaggtgtatttgggcctcgaggtctggcaggccccagaggg
aagaaaggggaagcgactctcagtacgggatcagggttgccaggagatcagggtgatcct
ggtccccaggggctccctggtgagacaggagccccaggcaaggacggagtaccaggttta
ccaggcctgccaggctttcagggtgatggtggacagggcttcccaggtgaaaaggggtta
ccaggacttcctggtgaaaaaggccgcactggtccaattggccccccaggaattgggcta
ccaggatcttctggacctcgtgggcttcctggagataaaggagtagatggattcccaggg
caaccaggcccccccgggattccaggtatcaccttgccttgtattattcctgggccatac
ggtccatcaggattcccaggagctcccggattcccaggccctaacggggcccgtggcctc
cctgggactccaggccagcctggattgcgtggaaataaaggagagcccggaagtccagga
ttggttcacctccctgaattgccaggatttcctggacctcgtggagagaagggcttgcct
gggtttcctgggctccctggaaaagatggcttgcctgggaaagttggcagtcccggctta
ccaggtcccaagggagcccctggtgacatcattggtgctgaaaacggtgctcctggggag
caaggcctgcagggactgccagggggcagaggatttcctggagactctggccttacagga
cccaagggtttgcttgggaagtcgggcctgctcggccccaaaggtgagcggggcagccct
ggaataccaggccgtgcaggacagctaggcccccgggggtctggtggtctattcggcatc
aagggcaaacccggcctcccaggagcaccaggctttccaggcacttcaggatatcctgga
aagaaaggtccaagaggcgatataggtccccctgcatcagctggaaagagaggcctgcct
gggctgaaaggccttccgggatctccagggctaattggcttcctggggaactccggcttg
ccaggggccactggactgccaggcctgccaggtccgaagggtgagaaggggtctgttgga
ctgataggttttccagggattccaggtctccctggtattcctggtgcaagtggattaaag
ggaattcctgggtcggcgggaagagtcggaccatctggacaggctggtagccctggtgta
aaaggagacagaggcgacccggggccagtcggagtacccagccccagacttccagtgctg
aacctccacttcacaggagacaaaggctctcagggctcagctggatccatcggatttcct
gggcccagaggtgacaaaggagaggctggccgccccgggccaccaggcttgcctggagct
cctggcttccccagcctcatcaagggacttagtgggagaccaggcacccctggctccaca
ggactgcggggcttacccggcctgaaggggtcccctggaatcacaggtttcccaggaata
ccaggggaaagtggttcacagggtctcaatggagctcccgggctcccaggagcatctggt
ctcccaggtttaaaaggagatcaaggccagacacttggaatttctggtagcccaggaccc
aagggacaacctggggagcctggtttcaaaggtgtgaaaggaaaagatggaccagttggt
gatgtgggtttcccaggaaacaaaggtgaagatgggaaagttggtatttctggagatgtt
ggccttcctgcctccccaggactccctggggtcgcaggcatgagaggaaatccagggctt
ccaggttcttcaggccacccaggggcagctgggcccctgggaccccttggcctaatagga
accaaaggtttccctggacttcctggtttacatggactgaatgggctgccaggaaccaag
ggaacccatggaactccaggacctagtataaccggtgtgcctgggccagctggcctgcct
ggtcccaaaggagaaaaaggttctctaggaattggcatcggagctccaggaaagccaggc
atgagaggaccaaaaggtagccgaggtttcccaggtctccagggccccgctggtctccct
ggtgccccaggcctctccttgccctcagtcatagcaggacagcctggcgacgccgggcga
ccaggcctagatggagaacgaggccgcccaggccccccggggcccccaggcccccctggg
ccatcctcggatcaaggcgacccgggagaccctggcttccctggagttcctggccctcaa
gggcccaagggagaccaaggaattccaggtttctctggcctccctggagagctaggactg
aaaggcatgagaggtgagcctggcttcatggggactccaggcaaagttgggccacctgga
gacccaggacttcccgggatgaaggggaaggcagggccaagaggcttatccggcccccga
ggcgctcctggacaaacaccaattgcagaagacatccaggctcctcctggacccatgggt
ctaacaggcatcgatggcatccctggcctcatgggggaccctggggtccaaggccctgga
ggcctacaaggcttcaaaggtttacctggcatccctggcaaagatggccccaatggactc
cctggcccacctggggctcttggtgaccctggtctccctggactgcaaggccctccagga
tttgaaggagctccagggaagccgggcccctttgggagggctggagtgcctgggcagagc
gtgagagtgggctacaccttggtgaagcacagccagtcggaacaggtgcccctgtgcccc
gtcgggatgagccagctgtgggtgggttatagcctgctgttcgtggaggggcaggagaaa
gcccacaaccaggacctggggtttgctggctcctgcctgccccgcttcagcaccatgccc
ttcatctactgcaacatcaacgaagtgtgccactatgcccggcgcaacgataaatcctac
tggctctccaccaccgcgcccatccccatgatgcccgtcggccagacgcagattccccag
tacatcagccgctgctctgtgtgtgaggcgccctcacaagccattgctgtgcacagccag
gacatcaccatcccgcagtgccccctgggctggcgcagcctctggattgggtactccttc
ctcatgcacacggccgccggcgctgagggcgggggccagtccctggtctcccctggctcc
tgcctagaggatttccgagccactcctttcatcgagtgcagtggtgcccggggcacctgc
cactactttgccaacaagtacagcttctggctgacgacggtggaagagaggcagcagttt
ggggaggagcccgtatctgagacgctgaaagccgggcagctccacacccgggtcagccgc
tgccaggtgtgtatgaaaagcgtgtag
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