Balaenoptera musculus (blue whale): 118889585
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Entry
118889585 CDS
T09887
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
118889585 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bmus03036
]
118889585 (DICER1)
Chromosome and associated proteins [BR:
bmus03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
118889585 (DICER1)
microRNA pathway
RISC loading complex
118889585 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DEAD
ResIII
Cas3-like_C_2
Amidoligase_2
Motif
Other DBs
NCBI-GeneID:
118889585
NCBI-ProteinID:
XP_036697313
UniProt:
A0A8B8WJD6
LinkDB
All DBs
Position
2:complement(166424225..166491382)
Genome browser
AA seq
1924 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLEVSASWTKEKWNQEFTKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFINDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDEE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDSGETD
IEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD
GTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI
EKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTAGDAGV
GVRSLPADFRYPNLDFGWKKSIDSKSFISVANSSPAENENYCKHSTIVVPENAAHQGANR
TSCLENHDQMSVNCRTLFESPGKLQIEVSADLTAINGLSYNKNLANGSYDLANRDFCQGN
HLNYYKQEIPVQPTTSYPIQNLYNYENQPKPSDECTLLSNKYLDGNANKSTSDGSPATAA
VPGTTETGTALTDRTASEQSPSPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLGD
SFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVNW
LPPGYVVNQDKSNTEKWEKDEITKDCMLANGKLDADLEEEEEEEEEEDLMWRAPKEDADD
EDDFLEYDQEHIQFIDNMLMGSGAFVKKISLSAFSATDSAYEWKMPKKSSLGSIPFSSDF
EDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKS
IADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKPMCPTRENFTSQQKNLS
GSRAAASGAGSCSSVLKDLEYGCLEIPPRCMFDHPDADRTLSHLISGFENFEKKINYRFK
NKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSA
LVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEK
EEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELL
EMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQ
VPNS
NT seq
5775 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcaacccctcagcatggcaggcctgcagctcatgacccctgct
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaatatcaggttgaactgcttgaagcagctctggatcataatacc
atagtctgtttaaacactggctcagggaagacgtttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagacttcaacagaaatggcaaaaggacggtgttcttggtc
aactctgccaaccaggttgctcaacaagtgtcagctgtcagaactcactcagatctcaag
gttggggaatactcaaacctggaagtaagtgcatcttggacaaaagagaaatggaaccaa
gagtttactaagcaccaggttctcgttatgacttgctatgtcgccttgaatgttttgaaa
aatggttacttatcactatcagacattaaccttttggtgtttgatgagtgtcatcttgca
atcctagaccacccctaccgagaaattatgaagctctgtgaaaattgtccatcatgtcct
cgtattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattggaa
gaaaagattcagaaactggagaaaattcttaagagtaatgctgaaactgcaactgacttg
gtggtcttagacagatatacttctcagccatgtgagattgtggtagactgtggaccattt
actgacagaagtgggctttatgaaagactgctgatggaattagaagaagcacttaatttt
atcaatgactgtaacatatctgtacattcaaaagaaagagattctactttaatttctaaa
cagatactctcagactgtcgtgcggtactggtagttctgggaccctggtgtgcggataaa
gtcgctggaatgatggtaagagaactacagaaatacatcaaacacgagcaagaggagctg
cacaggaaatttctattgtttacagacactttcctaaggaaaatccatgcactatgtgaa
gagcacttctcacctgcctcacttgacctgaaatttgtaactcctaaagtaataaaactg
cttgaaatcttacgcaaatataaaccgtatgagcgacagcagtttgaaagcgttgagtgg
tataataataggaatcaggataattacgtgtcttggagtgattctgaggatgatgaggag
gacgaagaaattgaagaaaaagaaaagccagagacaaatttcccttctccatttaccaat
attttgtgtggaattatttttgtggaaagaagatacacagcagttgtcttaaacagattg
ataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaattttataact
ggacatggcattggaaagaatcagcctcgtaacaaacagatggaagcggaattccgaaaa
caggaagaggtacttaggaaatttcgagcacatgaaaccaacctgcttattgcaacaagt
atcgtggaggagggtgttgacataccgaaatgcaacttggtggttcgttttgatctgccc
acagagtatcgatcctatgttcaatctaagggaagagccagggcaccgatctctaattat
gtaatgttagcagatacagacaaaataaaaagttttgaagaagaccttaaaacatacaaa
gctattgaaaagatcttgagaaacaaatgttccaagtcagttgatagcggtgagactgac
attgagcctgttgtggatgatgatgatgttttcccaccatacgtgttgaggcccgatgat
ggtggtccacgagtcacaatcaacacggccattggacacatcaatagatactgtgctaga
ttaccaagtgatccgtttactcacctggctcctaaatgtagaacccgagagttgcctgat
ggtacattttattcaactctttatctgccaattaactcacctcttcgagcctccattgtt
ggtcccccaatgagctgtatacgattggctgaaagagtcgtagctctcatttgctgtgaa
aaactgcacaaaattggcgaactggatgaccatttgatgccagttgggaaagagactgtt
aaatacgaagaagagcttgatttacatgatgaagaagagacaagtgttccaggaagacca
ggctccacaaaacgaagacagtgctacccaaaagcaattccagaatgtttgagggatagc
taccccaagcccgatcagccttgttacctgtatgtgataggaatggttctaacgacacct
ttacctgatgaactcaactttagaaggcggaagctttatccccctgaggataccacaaga
tgctttggaatactgacagccaaacccatacctcagattccacactttcctgtgtacaca
cgctctggagaggttaccatatctattgagttgaagaagtctggtttcacgttatctcta
caaatgcttgagttgattacaagacttcaccagtatatattctcacatattcttcggctt
gaaaaacctgcactagaatttaaacccacagacgctgactcagcatactgtgttctacct
cttaatgttgttaatgactccagcactttggacattgactttaaattcatggaagatatc
gagaaatctgaagctcgcataggcattcccagtacaaagtattcaaaagaaactcccttt
gtttttaaattagaagattaccaagatgcagttatcattccaagatatcgcaattttgat
cagcctcatcgattttatgtagctgatgtgtacactgatcttacccccctgagtaaattt
ccttcccctgaatatgaaacttttgcagaatattataaaacaaagtataaccttgacctg
accaatctcaaccagccgctgctggatgtggaccacacatcttcaagactgaatcttttg
acacctcgccatttgaatcagaaggggaaggctcttcctctgagcagtgctgaaaagagg
aaagccaagtgggaaagtctgcagaataaacagatactggttccagaactttgtgctata
catccaattccagcatcactgtggagaaaagcggtttgtctccccagcatactttatcgc
cttcactgccttttgaccgcagaggagctaagagcgcagacagccggcgacgctggtgtg
ggagtgaggtcactgcccgcggattttagataccccaacttagacttcgggtggaaaaaa
tctattgatagcaaatctttcatctcagttgctaactcctctccagctgaaaatgagaat
tactgtaagcacagcacaattgtcgtccctgaaaatgctgcacatcaaggtgctaataga
acctcctgtctagaaaatcatgaccaaatgtctgtgaactgcagaacgttgttcgagtca
cctggtaagctccaaattgaagtttcagcagatcttacagcaattaatggtctttcttac
aataaaaatcttgccaatggcagttacgatttagctaacagagacttttgccaaggaaac
catctgaattactacaagcaggaaatacctgtacaaccaactacctcatatcccattcag
aatttatacaattatgagaaccagcccaagcccagcgatgaatgtactctactgagtaat
aaataccttgatggaaatgctaacaaatctacctcagatggaagtcccgcgacggccgcc
gtgcctggtactacggagactggtacggcgctcacggacaggacggcttctgagcagagc
ccttctcccgggtactcctcgagaacgcttggcccaaaccctggacttattcttcaggct
ttgaccctttcaaatgctagtgatggatttaacctggagcggctcgaaatgcttggcgac
tcctttctaaagcatgccatcaccacctatctcttttgcacttatcccgatgctcacgag
ggccgcctttcctatatgagaagcaaaaaggtcagcaactgtaatctgtatcggcttgga
aaaaagaaggggctgcccagccgcatggtggtgtcaatatttgatccccctgtgaattgg
cttcctcctggttatgtagtaaatcaagacaaaagtaacacagagaaatgggaaaaagat
gaaataacaaaagactgcatgttggctaatggcaaactggacgcggacttggaggaggag
gaggaggaggaggaggaggaggacctgatgtggagggctccaaaggaggacgcggatgac
gaagatgacttcctggagtatgatcaggagcacatccagttcatagacaacatgctgatg
gggtcaggagcctttgtaaagaagatctcgctttctgctttctcagccactgattctgcc
tatgaatggaaaatgcccaaaaagtcctccttaggtagtataccattttcatcagatttt
gaggattttgactatagctcttgggatgcaatgtgctatctggatcctagcaaagctgtt
gaagaggatgactttgtggtggggttctggaatccatcagaagaaaactgtggtgttgac
acagggaaacagtccatttcttacgacctgcacaccgagcagtgcattgctgacaaaagc
atagccgactgtgtggaagccctgctgggctgctatttaaccagctgtggcgagagggct
gctcagcttttcctctgttcgctggggctgaaggtgctcccggtaattaagaggactgat
cgggaaaagcccatgtgcccgaccagggagaatttcaccagccaacaaaagaacctttca
gggagccgcgctgccgcctctggagctggctcctgctcctctgtgttgaaagacttggag
tatggctgtttggagatcccaccgagatgtatgtttgatcacccagatgcagataggaca
ctgagtcaccttatctcgggttttgaaaatttcgaaaagaaaatcaactacagattcaag
aataaggcttacctactacaggcttttacacacgcctcctaccactacaacactatcact
gattgttaccagcgcttagaattcctgggagatgcaattttggactacctcataaccaag
cacctttatgaagacccacggcagcactccccaggggtcctgactgacctgcgctcggct
ctggtcaacaacaccatctttgcatcgttggctgtgaagtatgactaccacaagtacttt
aaagcagtttctcctgagctcttccacgtcatcgatgattttgtgcagtttcagctcgag
aagaatgaaatgcaagggatggattctgagcttaggagatctgaggaggatgaagagaag
gaagaggatattgaagttccaaaggccatgggggatatttttgagtcgcttgctggtgcc
atttacatggatagcgggatgtcgctggagatggtttggcaggtgtactatcctatgatg
cggccgctgatagaaaaattttctgcaaatgtgccccgttcccctgtgcgagaattgctt
gaaatggaaccagaaaccgccaaatttagcccggctgagagaacttatgatggcaaggtc
agagtcaccgtggaagtagtaggaaaggggaaattcaaaggtgttggccgaagttacagg
attgccaaatctgcagcagcaagaagagccctacgaagcctcaaagctaatcaacctcag
gttcccaacagctga
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integrated database retrieval system
