Balaenoptera musculus (blue whale): 118889707
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Entry
118889707 CDS
T09887
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmus03041
]
118889707 (PRPF39)
Spliceosome [BR:
bmus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
118889707 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_12
TPR_16
ANAPC5
TPR_MalT
ARM_TT21_4th
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
118889707
NCBI-ProteinID:
XP_036697632
UniProt:
A0A8C0HUB5
LinkDB
All DBs
Position
2:121412468..121450032
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AA seq
668 aa
AA seq
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MQNSHMDEYRNSNNGSTGNSSEVVVDQSTDFSTEIMNVTEMEQSPDGSPNVNTTTEENEI
ANTVDLPVTETEANFPPEYEKFWKTVESNPQDFTGWVYLLQYVEQENHLMAARKAFDKFF
IHYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGDP
ETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSH
HFQRFKEHIQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKL
ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEF
EIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKKPM
VHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRLGNMEEAERLLQEAI
KNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL
KQNEENILNCFDKAIIHGSLPMKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQ
DSLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYG
QYYPPPPT
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggatgagtacagaaattccaataatggcagcacaggcaacagt
tcagaggtagtggtagatcagtctactgatttcagtactgagattatgaatgttacagaa
atggaacagtcacctgatggatctcctaatgtgaatacaactacggaagaaaatgaaata
gcaaatactgtggatcttccagtgacagaaacagaagcaaatttccctccagaatatgaa
aagttttggaaaactgtagaaagtaatcctcaggattttacaggctgggtatatttgctt
caatatgtagaacaggagaatcacttgatggctgccaggaaagcgtttgacaaatttttc
atacactatccgtattgctatggttattggaaaaagtatgcagacctcgaaaagcggcat
gacaacattaaacaatcagatgaggtgtatcgccgggggcttcaggcaatacctcttagt
gttgacctttggatacattatataaacttcttaaaagaaacattggaccctggtgatcct
gagacaaacagtacaataagaggaacttttgagcatgctgttctagctgcaggaacagat
ttccgatctgacagactctgggaaatgtatataaactgggaaaatgaacagggaaacctg
agagaagttacagctatatatgatcgtattcttggtattccaacacagctgtatagtcat
cattttcagagatttaaagaacatatacagaataacttacctagagatcttctaactggt
gaacagtttattcagctgcgaagggaattagcttctgtaaatgggcatagtggtgatgat
ggtcctcctggtgatgatctaccgtcaggaattgaagacataactgatccagcaaagcta
attactgaaatagaaaacatgagacatagaatcattgaaattcatcaagaaatgtttaat
tataatgagcatgaagttagtaaaaggtggacatttgaagaaggtattaaaagaccttat
tttcatgtgaaaccattggaaaaggcacaactgaaaaactggaaagaatacttagaattt
gaaattgaaaatgggactcatgaacgagttgtggttctctttgaaagatgtgtcatatca
tgtgccctctatgaggagttttggattaagtatgccaagtatatggaaaatcatagcatt
gaaggagtgaggcatgtcttcagcagagcttgcacaattcatctcccaaagaaacccatg
gtgcatatgctttgggcagcttttgaggaacagcagggtaatattaatgaagccaggaat
atcttgagaacatttgaagaatgtgttctaggattggcaatggttcgtttgagaagagta
agtttagaacgacggcttggaaatatggaagaagctgaacgtttgcttcaggaagccatt
aaaaatgccaaatcaaataatgaatcatcattttatgctatcaaactagctcggcatctt
ttcaaaatacaaaaaaaccttccaaaatcaagaaaggtgcttttggaagctattgaaaga
gacaaagagaacacaaagttatacctcaatttacttgaaatggaatatagtggtgacctc
aaacaaaatgaagaaaatatcctaaattgttttgacaaagctattatacatggttcatta
cctatgaaaatgagaattacattttctcagagaaaagtggaatttcttgaagattttggt
tcagatgttaataagcttctgaatgcttatgatgaacatcaaacactcctaaaagaacag
gattctttaaaaaggaaagcagaaaatggatcagaagaaccagaggaaaagaaagcacac
acagaagatacaacttcatcatctacacagatgattgatggtgatttacaggcaaatcaa
gctgcatataattatagtgcctggtatcaatacaattatcagaatccttggaattatgga
cagtattaccctccccctccaacctga
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