Balaenoptera musculus (blue whale): 118890225
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Entry
118890225 CDS
T09887
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118890225 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118890225 (CPSF2)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118890225 (CPSF2)
U7-dependent histone pre-mRNA processing factors
118890225 (CPSF2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
118890225
NCBI-ProteinID:
XP_036698630
UniProt:
A0A8B8WN47
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Position
2:163827173..163860662
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AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDVEEDIDQPSAHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLVIVHGPPEASQDLAECCRGFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctattatcaaattaactaccctttctggggtccaggaagagtctgctctttgc
tatcttctccaagtcgatgagtttagatttttactggactgcggctgggatgagcacttt
tctatggatatcatagattccctgaggaagcatgttcaccagattgatgcagtactgttg
tctcaccccgatcctctccatcttggcgcccttccgtatgctgtcggaaagctgggtctg
aactgtgctatctatgcaaccattcctgtttataaaatggggcagatgttcatgtatgat
ctttatcagtcccgacacaatacagaagattttacactctttacactagatgatgtggat
gcagcctttgataaaatacagcagttaaaattctctcagattgtgaatttgaaaggtaaa
ggacatggcttgtctatcacacctctgccagctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccacttaaatggatgttccctggaaatgctaagcagaccctctctacttatcaca
gattcatttaatgctacgtatgtgcagcccaggagaaaacaaagagacgagcaacttctg
acaaatgtcctggaaacacttcgaggtgatggaaatgtgttaatagcagtggacactgca
ggcagagttttggaacttgctcaactccttgatcaaatttggagaactaaagatgcagga
ttgggtgtttactcattggcactcctaaataatgtcagttataatgtggtggagttttct
aagtcccaggtagaatggatgagtgataaattgatgagatgttttgaagacaaaagaaat
aatccatttcagtttcgtcatctctctctgtgtcatggtctttctgacttggctcgagta
cctagccctaaagtggtacttgccagccagcccgacctggaatgtggattttcaagggat
ctctttattcagtggtgccaggaccctaaaaactcgatcattctaacttacagaactact
cctgggactttagcacgtttcctaattgataatccttctgaaaaaattacagaaatagag
ttgaggaaacgtgtgaaacttgaagggaaagaacttgaagagtacttggaaaaagagaaa
ctaaagaaggaagctgctaaaaaacttgaacagtcaaaagaggcagacatagattccagt
gatgagagtgacgttgaggaagatattgaccagccatcagctcataagactaagcatgac
ctgatgatgaaaggtgaaggtagtcgtaaaggaagtttcttcaagcaggctaaaaagtct
tatcctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagaaattatc
aaaccagaggatttcttagtgccagaacttcaagctactgaagaagaaaaaagcaaatta
gagtctggcctgacaaatggagatgaacccatggatcaggatttatctgatgttcctact
aagtgtatttctacaacagaatctatagaaataaaagccagggttacttacatagactat
gaaggacgctctgatggggattccattaagaaaatcatcaaccagatgaaaccacggcag
ctggtcattgtccacggaccgccagaggccagtcaggacctcgcggagtgctgccgtggg
tttggtgggaaagatattaaagtgtacatgccaaagctgcatgaaacagtcgatgccact
agtgaaactcatatctaccaggtgagattaaaagattcacttgtcagctcccttcagttt
tgtaaggcaaaagatgctgaattagcttggatagatggtgtcttagacatgagagtttcc
aaagtggacacaggagttattttagaagaaggagaactaaaggatgacggagaagactca
gaaatgcaagtggacgctccttcagattctagcgttatagcacagcagaaggccatgaaa
agtctgtttggagacgatgagaaagaaacaggtgaagaaagtgagatcattcctactttg
gaacccttaccacctcatgaggttcctggacaccagtcagtttttatgaatgaaccaaga
ctgtcggacttcaaacaagttcttttaagggaggggatccaggctgagttcgtaggaggt
gtactcgtttgcaacaatcaagtagcagtccgtagaacggaaactggacgtattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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