Balaenoptera musculus (blue whale): 118890276
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Entry
118890276 CDS
T09887
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03013
Nucleocytoplasmic transport
bmus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118890276 (UPF2)
03015 mRNA surveillance pathway
118890276 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118890276 (UPF2)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118890276 (UPF2)
mRNA cycle factors
P-body specific factors
118890276 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
118890276
NCBI-ProteinID:
XP_036698776
UniProt:
A0A8B8WNJ0
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Position
2:20181089..20274806
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AA seq
1270 aa
AA seq
DB search
MPAERKKPASMEEKESLLNSKEKDCSERRPVSSREKPKEEIKLTAKKEVIKVPEDKKKKL
EEDKRKKEDKERKKKEEEKVKAEEELKKKEEEEKKKHEEERKKQEEQAKRQQEEEAAQLK
EKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTIT
EQQRDSLSHDFSGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLLQ
VWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSVIYEQLKNIINADRESH
THVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLSFPPSEIISPEKQQPFQNLLKEYFTS
LTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLDE
NMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAIL
FKDNEKSCQNKESNKDDYKEAKEPKDNKEVSSPDDLELELENLEINDDTLELEGGDEAED
LTKKLLDEQEQEDEEASTGSHLKLIVDAFLQQLPNCVNRDLIDKAAMDFCMNMNTKANRK
KLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIET
KNKTVRFIGELTKFKMFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHL
RTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKD
LSKVTTEKVLRQMRKLPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVG
IHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVN
PDGSPSSLDPPEHLFRIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVW
TKDHPFPIDIDYMISDTLELLRPKIKLCNSLEESIRQVHDLEREFLIKLGLVNDKDSKDS
MTEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEEGSDNDDDEGEEEEEENTDYLTDS
NKENETDEENTEVMIKGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAI
PLHLKSQLRKGPPLGGGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQ
QAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNAD
LIFKTGGRRR
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaatctttactaaacagc
aaggaaaaagactgcagtgaaaggcggccagtgagcagcagggagaaaccaaaagaggag
atcaagcttaccgccaagaaggaggttattaaggtccctgaagataagaagaagaaactg
gaagaagataagagaaaaaaagaagacaaggaacgcaagaaaaaagaagaagaaaaggtg
aaggcagaggaggaattaaagaaaaaagaggaagaagaaaaaaagaagcatgaagaagag
agaaagaagcaagaagagcaggcgaaacgtcagcaggaagaagaggctgcccagttgaaa
gagaaagaggaatcccttcagcttcatcaggaggcttgggaacgacatcagttaaggaag
gaacttcgtagcaaaaaccaaaatgctccagacaaccgaccagaggaaaatttctttagc
cgactagactcaagtttgaagaaaaataccgcttttgtcaagaaactaaaaactattacg
gaacaacagagagactccttgtcccatgattttagtggcctaaatttaagcaagtacatt
gcagaggctgtagcttctattgtggaagcaaagctaaaaatatctgatgtgaattgtgct
gtgcacttatgctctctctttcaccagcgttacgccgactttgccccatcacttcttcag
gtttggaaaaaacattttgaagcaaggaaagaagagaaaacacctaacattaccaagtta
agaactgatttgcgtttcattgcagaattgacaatagttgggattttcactgacaaggaa
ggtctttccgtaatctatgaacagctaaaaaatattattaatgctgatcgggaatcccat
acccatgtttctgtggtgattagtttttgccgacattgtggagatgatattgctggactt
gtaccaaggaaagtaaagagtgctgcagagaagtttaatttgagttttcctcctagtgag
ataattagtccagagaaacagcaacctttccagaatcttttaaaagaatactttacgtct
ttgaccaaacacctgaaaagggaccacagggagctacagaatactgagagacaaaacagg
cgtattctacattctaaaggggagctaagcgaagatagacataaacagtatgaggaattt
gctatgtcttatcagaagctgctggcaaattctcaatccttagcagaccttttggatgaa
aatatgccagatcttcctcaagacaaaccaacaccagaagagcatgggcctggaattgat
atatttacacctggtaaacctggagaatatgacttggaaggtggtatatgggaagatgaa
gatgctcggaatttttatgagaacctcattgatttgaaagcttttgttccagccatcttg
tttaaagataatgaaaaaagttgtcagaataaagagtccaacaaggatgattacaaagag
gcaaaggaacctaaggataataaggaggtatcaagtcctgatgatttggagcttgagttg
gagaacctagagattaatgatgacactttggagctagagggtggagatgaagctgaagat
cttacaaagaaacttcttgatgagcaagaacaagaggatgaagaagccagcactggatct
catctcaagctcatagtagatgcttttctccagcaattgcccaactgtgtcaaccgtgat
ctgatagacaaggcagcaatggatttttgcatgaacatgaacacaaaagcaaataggaag
aagctggtccgggcgctctttatagttcccagacaaaggttggatttgctaccattttat
gcaagattggttgctacattgcatccctgcatgtctgatgtagcagaggatctttgttcc
atgctgaggggggatttcagatttcatgtacgaaaaaaggaccagatcaatattgaaaca
aagaacaaaactgttcgttttattggagaactcactaagtttaagatgttcacaaaaaat
gatacactgcattgtttgaagatgcttctatcagacttttcccatcaccatattgaaatg
gcatgtaccctactagaaacatgtggaagatttcttttcagatctccagaatctcacctg
aggaccagtgtacttttggaacaaatgatgagaaagaaacaagccatgcatctcgatgca
agatatgtcacaatggtggagaatgcatattactactgcaacccacctccagctgaaaaa
acagtgaaaaagaaacgtcctcctctccaggaatatgtccggaaacttttgtacaaggat
ctctccaaggttaccactgagaaggttttgagacagatgcgaaagttgccttggcaggac
caagaagtgaaagactatgtgatttgttgtatgataaacatctggaatgtgaaatataac
agcattcattgtgtagccaacctcttagcaggactagtgctctaccaggaggatgttgga
atccatgttgtggatggagttttagaagatattcgattaggaatggaggttaatcaacct
aaatttaatcagagacgtatcagcagtgccaagttcttaggggaactttataattaccga
atggtggaatcggctgttatttttagaactctttattcttttacttcatttggtgttaac
cctgatggctctccaagttcactggaccctcccgagcaccttttcaggattagactagtg
tgcactattttggatacctgtggccagtactttgacagaggttctagtaaacgaaaactc
gattgcttccttgtgtattttcagcgttatgtttggtggaagaaaagtttggaggtttgg
acaaaagaccatccatttcctattgacatagattacatgatcagtgacacactagaactg
ctaagaccaaagatcaaactctgtaattctctggaagaatccatcaggcaggtacacgac
ttggaacgagaattcttaataaaactaggcctagtaaatgacaaagactcaaaagattct
atgacagaaggagagaatcttgaagaggatgaagaagaagaagaaggaggagctgaaaca
gaggaacaatctggaaatgaaagtgaagtgaatgagccagaggaagaggagggttctgat
aatgatgacgatgaaggggaggaagaagaggaagagaatacagattacctcacggattca
aataaggagaatgaaactgatgaagaaaatactgaggtaatgattaaaggaggtggactc
aaacatgtaccttgtgtagaagatgaagacttcattcaagctctggataaaatgatgcta
gaaaatcttcagcaacgaagtggcgaatctgttaaagtgcaccaacttgatgttgccatt
cccttgcatctcaaaagccagctgaggaaagggcccccactcggtggtggggagggagag
gcagagtctgcagatacgatgccgtttgtcatgttaaccagaaaaggcaataaacagcag
tttaagatccttaatgtacccatgtcttcccaacttgctgcaaatcattggaaccagcaa
caggcagaacaggaagagaggatgagaatgaaaaagctcacactagatatcaatgaacgg
caagaacaagaagattatcaagaaatgctgcagtctcttgcccagcgcccggctccagca
aacaccaatcgggagcggcggcctcgttaccaacatccaaagggagcgcctaatgcagat
ctaatctttaagactggtgggaggagacgttga
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