KEGG   Balaenoptera musculus (blue whale): 118890601
Entry
118890601         CDS       T09887                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9-like
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
bmus  Balaenoptera musculus (blue whale)
Pathway
bmus03020  RNA polymerase
bmus03420  Nucleotide excision repair
bmus05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:bmus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    118890601
  09124 Replication and repair
   03420 Nucleotide excision repair
    118890601
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    118890601
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bmus03021]
    118890601
   03400 DNA repair and recombination proteins [BR:bmus03400]
    118890601
Transcription machinery [BR:bmus03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     118890601
DNA repair and recombination proteins [BR:bmus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      118890601
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Ogr_Delta Zn_ribbon_GRF_2 Zn_ribbon_NrdR
Other DBs
NCBI-GeneID: 118890601
NCBI-ProteinID: XP_036699550
UniProt: A0A8B8WU99
LinkDB
Position
2:complement(168678922..168679467)
AA seq 125 aa
MEPDGTYEPGFVGIRFCQEGNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE
NT seq 378 nt   +upstreamnt  +downstreamnt
atggaacccgatgggacctacgagccgggcttcgtgggtattcgattctgtcaggaaggt
aacaacatgctttaccccaaggaggacaaggagaaccgcattctgctgtacgcgtgccgg
aattgtgattaccagcaggaagccgacaacagctgcatctacgtcaacaaaatcacgcac
gaagtggacgaactgacccagatcatcgctgacgtgtcccaggaccccacgttgccgcgg
accgaagaccacccttgccaaaagtgcggccacaaggaggcggtgttcttccagtcacac
agtgcccgggccgaggatgccatgcgcttgtattacgtgtgcacggccccacactgcggc
caccgctggaccgagtga

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