Balaenoptera musculus (blue whale): 118890606
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Entry
118890606 CDS
T09887
Symbol
RC3H1
Name
(RefSeq) roquin-1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bmus03000
]
118890606 (RC3H1)
04121 Ubiquitin system [BR:
bmus04121
]
118890606 (RC3H1)
Transcription factors [BR:
bmus03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
118890606 (RC3H1)
Ubiquitin system [BR:
bmus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118890606 (RC3H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-CCCH_UNK
zf-C3HC4_2
FYVE
zf_CCCH_4
zf-CCCH_4
Vesi_VP2
PaaA_PaaC
Baculo_IE-1
zf-RING_4
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
118890606
NCBI-ProteinID:
XP_036699566
UniProt:
A0A8B8WUC9
LinkDB
All DBs
Position
1:complement(129512076..129612174)
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AA seq
1135 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IELLPVNSALLQLVGAQVPEQQPITLCSGVEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLPSTAILPDE
GAVDLPSRKTPALPNGIVSAGNTVTQLIPRGTDPSYDSSLKPGKIDHLSSSAPGSPPDLL
ESVPKSISALPVNPHPVPPRGPTDLPPMPVTKSLQMVPRGSQLYPAQQADVYYQDPRGAA
PPFEPAPYQQGMYYPPPPQCVSRFVRPPPSAPEPGPPYLDHYPPYLQDRVVNSQYGTQPQ
QYPPMYPPHYDGRRVYPAQSYTREEIFRESPIPIEIPPAAVPSYVPESRERYQQMEGYYP
VAPHPTQIRPSYNREPPYSRLPPPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFAPSP
TLPPAFQQEEFLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDVVAAGSVEM
MNVESKGMRDQRLDLQRRAAETSDDDLIPFGDRPTVSRFGAISRTSKTIYQGAGPMQAMA
PQGAPTKSINISDYGPYGTHSGWGGSPYSPHQNIPSQGHFSERERISMAEVASHGKPLPS
AEREQLRLELQQLNQQISQQTQLRGLEAVGSRLALQREASALAGQSQTPPPPPPPPKWPG
APSSEQLSLELHQVEREIGKRTRELSMENQCSLDMKSKLNTSKQAENGQPEPQNKVPAED
LTLTFSDVPNGSALTQENISLLSNKTSSLNLSEDPEGGGDSNDSQRSGVTSSSAP
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacagtggacggatttcctctcctgcccaatttgcactcagact
ttcgacgaaacaattcgaaagcccatcagtttgggttgtggccatactgtctgcaagatg
tgcctgaacaaactccaccgcaaggcttgcccgtttgaccagaccactatcaatacagac
attgaactcctcccagtaaactcagcattgctgcagttagtgggtgctcaggttcctgaa
cagcagcccattactttgtgtagtggggttgaagatacaaagcattatgaggaagccaag
aagtgtgtagaagaattagcactgtacctgaaaccactcagcagtgctagaggagtgggt
ctgaatagcactactcagagtgttctgagtcgcccaatgcagaggaagctggtgactctg
gtccactgccaactagtagaagaagaaggcaggattcgtgccatgagggcagctcgatct
ttaggtgaacgaactgttacagagctcattctccagcaccagaatcctcagcaactctct
tccaatctttgggcagcagtcagagctagaggctgccagttccttggaccagcaatgcag
gaggaagctctaaagctggttctcctggccttagaagatggttctgctttgtcaagaaaa
gtattggttctctttgtggtgcaaaggttggagccacggtttcctcaagcctctaaaact
agcattgggcatgttgtccagctcctttatagagcctcctgcttcaaggtcaccaaacgt
gatgaagactcttctttgatgcagctgaaagaagaatttagaacctatgaagctctgcgg
cgagaacatgactcccagatagtgcagattgctatggaagcaggcttacgaattgcacca
gaccagtggtcctctttgctttatggggaccagtctcacaaatctcatatgcagtccatt
attgacaagttgcagaccccagcctcttttgcacaaagtgttcaggaactaacaattgct
ctccagaggactggagatccagcaaacttgaatcgactaagaccccatttggagctatta
gcaaacattgaccctagtccagatgctcctcctcctacttgggaacagctagaaaatggg
ctggttgctgtgcgtacagtggtacatgggttggttgattatatccagaatcacagcaaa
aaaggagcagatcagcagcagcctccacagcatagcaagtataaaacatacatgtgtcga
gacatgaagcagagaggaggatgccctcgtggggccagctgtacatttgcacactcacag
gaggaactggaaaaatttcgtaaaatgaacaaacgcctggttcccagaagacccctgagt
gcctctttgggtcaacttaatgaggtgggcctgccttcaacagctatccttccggatgaa
ggtgcagtggatctgcctagcagaaaaacccctgctctgccaaatggaattgtatcagca
gggaatacagtaacacagctgattccacgagggacagaccccagctacgattctagtctg
aaaccaggaaagatagatcacctgagcagtagtgcgcctggatcccctcctgacctgcta
gaatctgtccctaagagtatttctgccttgcctgttaatccacatcctgtacctccaaga
gggccaacagacctgccccctatgcctgtcaccaaatcacttcagatggtaccgcgaggt
tctcagttatatccagcacaacaggcagatgtttattaccaggatcctcgaggagctgct
ccaccatttgaaccagcaccttatcagcagggtatgtactatcctccaccaccacaatgt
gtgtcccgctttgtccgacctccaccatctgctcctgaacctggtcctccctacttggat
cattatccaccgtacctccaagatcgtgtagtaaactctcaatatggcacacagccacaa
cagtacccacctatgtacccaccacactatgatggccgtcgagtataccctgctcagtct
tacacaagagaggagattttccgagaaagtcctatacccattgagattccacctgcagca
gtaccatcctatgtaccagaatccagagaaagataccaacagatggagggttactatcca
gtggctccccacccaactcagatcagaccttcgtacaacagagagcctccttacagccgg
cttcctccccctccccagccccatcctagtctagatgagctacatcgaagacgaaaggaa
ataatggcacaactagaggaaaggaaggttatctctccacctccttttgcaccttcacca
acattgcctcctgccttccaacaagaggaatttttggatgaagacttgaaggtagctggg
aaatacaaaggaaatgattatagccagtactcaccgtggtcatgtgacaccatcggctcc
tacattggaaccaaagatgcaaaacccaaagatgttgtggcagcagggagtgtggaaatg
atgaatgtggagagtaaaggaatgagagaccagcgattggaccttcagagaagagcagca
gaaaccagtgatgatgacctcatcccatttggagaccgaccaacagtatctcggtttggt
gccatttctcgaacttccaaaacaatatatcagggtgctggcccaatgcaggctatggca
cctcagggagctcccacaaaatctattaacatttcagattatggtccgtatggaacccac
agtggctggggaggttctccatattcacctcatcaaaacataccttctcagggacacttc
agtgagagggagagaatatctatggcagaagtggccagtcatggaaaaccccttccatct
gctgagagggaacagctacgactagaattgcagcagttaaaccaacaaattagccaacag
acccagctgcgtggactagaggctgtcggtagcaggttggcgctgcagagggaggcgagc
gccttggcaggccaatcacagaccccaccgccgccgccgccgccgccaaagtggcctgga
gcgccctcaagtgagcagctgagcttggaactgcaccaggtggaaagggaaatcgggaag
agaacccgggaactgagcatggagaaccaatgttctctggacatgaaaagcaaattgaat
acaagtaagcaagcagaaaatggacaaccagaaccacaaaataaggttccagctgaggac
cttacattgacattcagtgatgtgccgaatggatcagccttgacacaagagaacatcagc
ctcctatcaaacaagaccagctctctgaacctgtcagaggaccctgagggaggaggggac
agtaatgactcccagagatcaggagttacatccagttctgctccctaa
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