Balaenoptera musculus (blue whale): 118891134 Help Entry 118891134         CDS       T09887                                  Symbol SPG11 Name (RefSeq) spatacsin   KO K19026   spatacsin Organism bmus  Balaenoptera musculus (blue whale) Pathway bmus05014   Amyotrophic lateral sclerosis bmus05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:bmus00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     118891134 (SPG11)    05022 Pathways of neurodegeneration - multiple diseases     118891134 (SPG11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bmus03400]     118891134 (SPG11) DNA repair and recombination proteins [BR:bmus03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      118891134 (SPG11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  118891134 NCBI-ProteinID:  XP_036700663 UniProt:  A0A8C0CFJ3 LinkDB All DBs Position 2:88198302..88291470 Genome browser AA seq 2439 aa AA seqDB search MAADKGAGSAEAVERVLPVLLVPVPAEATGRLGSRAQLHREQEVLGSLTAAGSLQVLPLA PGGRGGGGCRLEGRFRQFVWEDSHNSGTPTDKPRLLALSENNELLICEFNLKDGRCDATI SYSYTEETLQKLVEDQIISISLLSLRILSFHSNTSLLFINECIVLHIIFPERDAEIRVLN CFTLSLPAQAVDRIIDTQLCRGILFVLSRLGWIYIFDTVDGRHVAHVDLALPQEDMYNEQ QQEPAKSSSFTSLKVSQDLDVVVIVSSSNTAVALNLNLYFRQYPGHLLCERTLEDIPIEG PKGIDEDDPVNSDYNMKLTKFSFQVDRSWKAQLSSLNETIKNSKLEGTCCAPWFQDILHL EPPESGNHSTSVPNWAFTPQDVMCSQYSFPQKGPAKTSDSGRSWKRIHISEQEEPLELTC MSVTGFTALFTWSVERTGCTIVLWDLETQSMQCFSLGKKCIPVDSGGDQQLCLVLTEGGL SLILFGLTQEEFLNRLMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENRQLDTVDFFL KSKENLLSPSSKSSVPDQFDHFPSHSYLKHVEELTPALDLLCSAIRENDSETQSKHFSEQ LLNLTLSFLNKQIKELFIHNEGLDEHLQKGVNILTSYINELRTFMIKFPWKLTDAIDEYD VNENVPRVKESNIWEKLSLEEVIANAILNNKIPEAQTFFRINSHSAQRLEELIRIGLDLV FDNLKKNNIKEASELLKNMGFNVKDQLLKICFYTTDKNIRDFLVEILKEKNYFSEEEKRT IDFVHQVEKFYSGHFQENMQIQSFPRYSIKEQDFFKHKSVLDSFLKYDHKDTDKLNKQDH RIVLTWAQWWNQLTQESILLPRISPEEYKSYSPEALWRYLTARHDWFSIILWIGEFQTRN SYASLQQNKWPPLTVDVVDQNTRCNNYMRNEILDTLARNGIFITSELEDFELFLKRLNRI GGVMQDTLPVQNYRSKDGWDFHSHFILYCLEHSLQYLLYVFLDYYKLSPPNCPFLEKKEL HEAHPWFEFLVQCRQVSSNLTDPKLIFQASLANAQILIPSNQASVSSMLLEGHTLLALAT TMYAPGGVSQVVQNEENENCVKKVDPQLLKMALTPYPKLKTALFPQYTAPSVLPPDITLY HLIQSLLPFDPSRLFGWQSANTLTIGDAASQLPHFSSPDLVNKYAIVERLNFAYYLHHGR PSFAFGTFLVQELTKSKTPKQLIQQVGNEAYVLGLSSFHIPSIGAACVCFLELLGLDSLK LRVDMKVANIILSYTCRNEDAQYNFIRESLAEKLSKLAMGEKSTIEELLVLVEEGIWDSI QQQEIKRLSSESSSQWALVVQFCRLHNLKLSTSYLRECAKANDWLQFIIHSQLHNYHPEE VKSLLQYFSPVLQDHLRLAFENLPSVSKSRMDSDQVCNKSPQELQRNEVEMTDFFEILLQ CSEVPNSWCWLLAEAVKQQAPILSVLASCVQDASAIPCLCVWIITSVEHSVAAEAMGHIQ DSLEGHTWDLEDLSVIWRTLLTWQKSKTLIRGFQLFFKESPLLFMMEMYELCMFFKNYEE AEAKLLEFQKSLETLETAATRVHAIIPAPWLKEHVYFLLKLMLQQCRTQYELGKLLQLFV GIEHLFSDGPDVKKLCVLSQILKDTSIAINRVIITSYSLENFQHECRSILEKLETDGYFA LARRVAELAELPVDNLVIEEITQEMQTLKHIDQWSLKQARIDFWKKCHENFKKNSISSKA ASSFFSAQALTACECPAEEGPSSTEERHLLLTLAGHWLAQEDLVPLEELEELEKQIWLCR ITQHTLRGNQEEIDPRCSQQISTTGELSFESLANEFSFSKLAALNTSKYLEFNGLPSKDT CENKLNWKEQESLNFLIGRLLDDGCVHEASRVCRYFHFYNQDVALVLHCRALASGEASVD DLHPEIHALLQSAELLEEEEEPGVPLRKVQSTSSLDSQSFVMLPPSDEVVTTLETLTSKC LHGKNYCRQVLCLYALAKELGCPYTDVAAQDGEAILRVILASQQPDRCKRAQAFISTQGL EPDTVAELVAEEVTRELLTPSEGTGHKQTFTPTEESQTFLQLTALCQDRTLVGMKLLDKI SSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAARLLTDNHLAPSEEYGLVVRLLT GIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMIALC FSMCREIGENHEAAACIQLKLIESQPWEDSLKDGHHLKQLLLKALTLMLDAAESYAKDSC VRQALHCHRLTKLITLQIHFLNTGQNTMLINLGRHRLMDCIMALPRFYQASIVAEAYDFV PDWAEILYQQVILKGDFNYLEEFKQQRLLRSSIFEEISIKCKHHQPTDLVVKNLKKLLTY CEDVYLYYKLAYEHKFYDVVNVLLKDPQTGCCLKDMLAG NT seq 7320 nt NT seq  +upstreamnt  +downstreamnt atggctgcagacaagggggctggaagcgctgaagccgtggagcgggttctacccgtgttg ttggtgccggtccccgccgaggcaacggggcggctgggatcccgggcgcagttgcacagg gagcaggaggttctggggagcctgacggctgcaggcagccttcaagtgcttcccttggcg cccggcggccggggcgggggcggctgccgcctggaaggccgttttcggcagtttgtatgg gaggactctcataacagtgggacaccaacagacaagcccagactgcttgctcttagtgaa aataatgaactgctcatctgtgaatttaatttgaaagatggaagatgtgatgcaaccatt tcatatagctatactgaggagacattgcaaaagctcgttgaagatcaaattatcagtatt tccttattatctttgagaattctgtcatttcacagtaacacatcattattgttcatcaat gaatgtatcgtcctgcacattatatttcctgaaagagatgctgagattagggtactcaac tgtttcacattatccttgcctgcacaggcagtggacagaattattgacacacagctctgc agaggaattctttttgttttgagtcgtttaggctggatctacatttttgacactgtggat ggtagacatgtagctcatgtggatttagcacttcctcaagaagatatgtataatgagcag caacaagagccagccaagagttcttcctttacttcattgaaagtgtctcaagacctagat gttgtagtgattgtcagctcctccaacactgcagttgctcttaacttaaatttgtatttc aggcaatacccaggacacctactatgtgaaagaacactagaagacattcctattgaaggc cctaaggggatagatgaagatgatcctgttaattctgactacaacatgaaactgaccaag ttttccttccaagttgatcggtcttggaaagcccagctgtcatcactgaatgaaacaata aagaactccaagctggaaggtacctgttgtgctccgtggttccaggatattttgcatttg gagccccctgaatctggtaaccacagtaccagtgtgccaaactgggccttcactccacag gatgtaatgtgcagccagtatagttttccacagaaaggtcctgccaagaccagtgattca ggaagatcatggaaaagaatacacatcagtgaacaggaggaaccccttgagcttacatgt atgtctgtgacaggcttcactgcgctgtttacttggtcagttgaaaggacgggctgtacc attgtcctgtgggatttggagacccagagcatgcagtgtttttcgctgggcaagaagtgt attcctgtagacagtggtggagaccagcaactgtgccttgttttgacagaaggtggactc tctctgattttgtttggtttgactcaagaggaatttttgaataggctaatgatccatgga agtgccagcactgtggactctctttgccatctcaatggttgggggaggtgctccattccc atacatgcactagaggcaggaatagaaaatcgtcagctggacacagtagatttctttttg aagagcaaggaaaatcttttgagtccatcctcaaaatcttctgtacctgatcagtttgat cactttccatcccattcatatttaaaacatgtggaagagctgacaccagcattggattta ctttgctcagcaattagagaaaatgattctgaaacccagagcaaacacttttcagaacaa ttgcttaatcttacactgtctttccttaacaaacaaataaaggagctttttattcacaat gaagggctagatgaacatctacagaaaggagtgaacattttgaccagctacattaatgaa cttcgaaccttcatgataaagtttccttggaagctaacagatgctatagatgaatatgat gtaaatgaaaatgtccccagagtaaaggagagcaatatatgggagaagctcagccttgag gaagttattgccaatgccattttaaacaacaaaataccagaggcacaaactttcttcagg attaacagtcattctgctcaaagactcgaggagttgattagaataggcctagatttggtc tttgacaatttgaaaaagaataatataaaggaagcctctgagcttttgaagaatatgggc tttaacgtaaaagaccagttgctcaagatatgtttctatacaactgataaaaacatacgg gactttttggttgaaattttaaaagaaaaaaactatttttctgaagaagaaaaaagaact atagacttcgtgcatcaagttgagaagttttattcaggacatttccaagaaaatatgcag atccagtcttttcccaggtattcgataaaggaacaagattttttcaagcacaagtctgtt ttggactcattcctgaaatatgatcataaagatacagataaacttaacaagcaagatcac agaattgtgttaacttgggctcagtggtggaatcaactaacacaagaatccatccttctc cccaggataagtccagaagaatacaaatcatattctcccgaagccctctggagatacctc acagctcgccatgattggttcagcattatcttgtggattggagaatttcagacccgaaat agttatgcctcacttcagcagaacaaatggccccctctgactgttgacgttgttgatcag aatactcgctgcaacaactacatgaggaatgaaattttagatacgctggccaggaatgga atttttattacatctgaactagaagactttgaactctttctcaaaagactgaaccgtatt gggggcgtgatgcaagataccctccctgttcaaaactataggtccaaagatggttgggat ttccattctcacttcattctctattgtttggaacacagtctgcagtatcttctttatgtc tttcttgactattacaaacttagtcctccaaattgtccctttttggaaaaaaaagaatta catgaagctcacccttggtttgaatttttagttcagtgtcgacaagtttccagtaattta acagatcccaaactgatcttccaggctagccttgcaaatgctcagatacttattcccagc aaccaggccagtgtaagcagtatgctattggaaggacataccctcctggcccttgctacc acaatgtatgcccctgggggcgtcagccaggttgttcagaatgaagaaaatgagaactgt gtgaagaaagtagacccccagctactgaagatggcattaactccttaccccaagcttaaa actgctctcttcccacagtacactgcccctagtgtcctgccaccagatattacactctac cacctgattcagtcattattgccctttgatcctagcagattgtttggctggcagtctgcc aacacactgactataggagatgcagcgagtcagctcccacatttctctagccctgacctg gttaataaatatgctatagtagaacgtctgaattttgcttattatttacatcatggacga ccatcatttgcgtttggtacttttctggttcaggaattaaccaagagcaagacccccaag cagctgatccagcaagtaggcaatgaagcctatgttttagggctctcctccttccacata ccttcaataggagctgcctgtgtttgtttcttagaactgcttggcctcgacagcctcaag ctcagagttgatatgaaagtggccaatataattttgagctacacgtgtagaaatgaagat gctcagtacaactttatcagagagtctctagctgaaaaactatctaaactggctatgggt gaaaagtcaaccatagaagaattgcttgttctcgtagaagaaggtatatgggacagcatt cagcagcaggaaataaagaggttatccagtgaatccagcagccagtgggcattagtggta caattctgcaggctccacaatctgaaactgagcacatcttaccttagagaatgtgccaaa gcaaatgattggttacagtttattatccacagccaactccataattaccacccagaggag gtgaaatctcttctccagtatttcagccctgttcttcaagaccacttaagactggctttt gagaacttgccctcagtgtccaagtctagaatggacagtgatcaagtctgcaacaagtcc ccgcaggaactccaaagaaacgaagtagagatgactgatttctttgaaattctgcttcag tgctcagaggtgccaaactcctggtgctggctcctggcagaagcagtgaaacaacaggcc ccaatccttagtgtcctggcctcatgtgtccaggacgccagtgctattccttgcctctgt gtttggatcatcacttctgtggagcacagtgttgcagctgaagcaatgggacacattcag gactcactggagggccatacctgggaccttgaggacctctcagtcatctggaggacatta ttaacatggcagaagagcaaaactctcatcagaggtttccagcttttctttaaggagtcc ccattactattcatgatggagatgtatgaactgtgtatgttcttcaagaattatgaggaa gccgaagctaaacttctggagttccagaagagccttgaaactcttgaaacggcagccaca agggtccacgctatcattcctgccccatggctgaaggagcatgtgtattttcttttgaag cttatgctgcagcagtgtaggacccagtatgagctggggaagcttttacagctgtttgtt ggaatagagcatctcttctctgacggtccagatgtgaagaagctgtgtgtccttagccaa attttgaaggatacgtccatagccattaatcgtgtaattattaccagctacagccttgag aattttcagcatgaatgtagatcaattttggaaaaactggagacagatggatactttgct ttggccaggagggtagcagaactagctgagctacctgtggacaacttggttattgaagag ataacacaggaaatgcagaccttaaaacacattgaccagtggtccctgaaacaagcaaga attgacttctggaaaaaatgtcatgagaattttaagaaaaattccatttcaagcaaagca gcttcttcctttttctcagcccaggctcttacggcatgtgagtgcccagctgaagaggga ccaagcagcactgaggagcgccatctgctgctcactctggcaggacactggcttgcccag gaggacctggtgcctttggaggagctggaggagctagagaagcagatctggctctgccgc atcacccagcacaccctcaggggaaaccaggaggaaatagaccccagatgttctcaacag atttcaactactggtgaactttcctttgaaagcttagccaatgagttttcattctctaag ttggctgctctgaacacatcaaaatacttagaatttaatggccttccatccaaagacact tgtgagaacaaactgaattggaaggagcaggagtccctaaactttttgattgggcgccta ttggatgatggctgtgtgcatgaagcaagtagagtatgccgatattttcatttctataac caagatgttgccttggtgttgcattgcagagcactagcttcaggggaagctagtgtagat gacctgcacccagagatccatgctctcttacaaagtgctgagctgcttgaggaagaagaa gaacctggcgttcctctaaggaaagtccaaagcacttcaagtttggatagtcagtcattt gtgatgctgccccccagtgatgaagtggtgactactctggaaactctgacaagcaaatgc ctccatgggaagaattattgccggcaggtcctctgtctctatgcacttgccaaggagttg ggctgtccctacacagatgtcgctgcccaggatggtgaggccattctccgggtaatcttg gcctctcagcagcctgaccgatgcaagcgagctcaagccttcatcagcacccagggcctc gagccagacacagtggctgaacttgtggctgaagaggtgacccgggagctgctgacccca tcagagggaacaggacataagcagacgttcaccccaacagaggaaagccagacgtttctt cagctgaccgctctgtgtcaagaccgcaccttggtaggcatgaagttgttggataagatt tcctccgttccccatggggaattgtcttgcaccacagagctgctgatcctggctcatcac tgcttcacactgacctgccacatggagggcatcatccgagtcctgcaggccgcccggctg ctcacagacaaccacttggcccccagtgaggagtatggactggtggtgcgtctcctcact ggcattggaaggtacaatgagatgacatacatatttgatttgctgcataaaaaacactac tttgaagtgctgatgaggaagaagttggacccgagtggtaccctgaagacagccctactg gactacatcaaacgctgccgccctggggacagtgagaagcacaacatgattgccctgtgt ttcagcatgtgccgggagattggggagaaccatgaggcagctgcctgcatccaattgaaa ttgattgagtctcagccctgggaggacagcctcaaggatgggcaccacctgaagcagctg ctgctgaaggccctgactctgatgctggatgcagcagagagttatgccaaggactcctgc gtgcgacaggccctgcactgtcaccggctcaccaagctgataacactgcagattcacttt ctgaacaccggccagaacacaatgctcatcaacctgggccgccacaggctgatggactgt atcatggccctacctcggttctaccaggcttctattgtggctgaggcctatgactttgtt cctgattgggctgaaattctataccaacaagtgattcttaaaggagactttaattacttg gaagaatttaagcagcaaaggttattaagatccagtatatttgaagaaatttcaataaaa tgtaaacatcatcagcctactgacttagttgtgaaaaacctgaagaagttactcacatat tgtgaagatgtctacttgtattacaagctggcatatgaacacaaattttatgacgttgta aatgtgcttctgaaggaccctcagacaggttgctgtctaaaggacatgctagcaggttag

DBGET integrated database retrieval system