Balaenoptera musculus (blue whale): 118891864
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Entry
118891864 CDS
T09887
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmus03021
]
118891864 (CHD1)
03036 Chromosome and associated proteins [BR:
bmus03036
]
118891864 (CHD1)
Transcription machinery [BR:
bmus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
118891864 (CHD1)
Chromosome and associated proteins [BR:
bmus03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
118891864 (CHD1)
SLIK complex
118891864 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
118891864
NCBI-ProteinID:
XP_036701564
UniProt:
A0A8B8WW95
LinkDB
All DBs
Position
3:complement(78894903..78971229)
Genome browser
AA seq
1797 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDNSQENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQHQASSNSGSEE
ESSSSEDSDDSSSEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDYEP
KNKVKSRKPQNRSKSKNGKKIIGQKKRQIDSSEEEEEDEEDYDNDKRSSRRQATVNVSYK
EDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGDP
NAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRWL
KNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSW
EDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEGLELRD
YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLT
SWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAFL
GGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPE
KFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQK
QYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQHL
IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELR
KQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQ
KKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNKE
ELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVAN
FSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISFN
GSEGRRSRSRRYSGSDSDSVSERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGG
PLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTFR
ISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYIIPCHTKAAHFDIDWGKEDDSNLLI
GIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSKDLARKEAQ
RLSGAGGSKRRKVRAKKNKAMKSIKMKEEIKSDSSPLPSEKSDEDDDKDEITSVKHPNKK
VKTERDSEEKPEPDVCIKKEPEEKREAKEKENKRELKREIKEKEDKKDIKEKDFKEKREN
KVKEAIQKEKDIKEEKLSESKSESKERSKKSSVSDAPVHITASGEPVPISEESEELDQKT
FSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQ
WRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSNLNTQVIRNPDVERLKEN
TNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYKQ
DSRYYSDRDKHRKLDDHRSRDHRSNLEGSLKDRTHSDHRSHSDHRLHSDHRSSSEYTHHK
SSRDYRYHSDWQLDHRASSSGSRSPLDQRSPYGSRSPFEHSVEHRSTPEHTWSSRKT
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagagtcaagccagtcg
gatgatgattctgggtcagcgtcaggctctggatctggttcaagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactctggatccgaatcgggcagt
cagtcagagtctgagtcagacaattcccaagaaaataaagttcaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccctagtattctggctgttcagagatctgca
atgctcaagaagcagcagcaacagcaacatcaagcttcatctaatagtggatcagaagag
gagtcttctagcagtgaagattccgatgactcatcgagtgaggtcaaaaggaaaaagcat
aaagatgaagattggcagatgtctgggtcaggatctccatctcagtctggttcagattca
gaatctgaagaagaaagagataaaagtagttgtgatgaaacagaatctgattatgagcca
aaaaacaaagttaaaagtagaaaacctcaaaatagatctaagtcaaaaaatggaaaaaag
attattggacaaaaaaagagacagattgattcatctgaggaggaggaggaggatgaagag
gactatgataatgataaaagaagctctcgtcgacaagcaactgtcaatgttagctataag
gaagacgaagaaatgaaaacagattctgatgacctacttgaagtctgtggagaggatgtt
cctcaacccgaggaagaggaatttgaaacaatagaacggtttatggattgtcggattggg
agaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgaccca
aatgcaggatttgaaaaaaacaaggaaccaggagagatccagtatttaattaaatggaaa
ggatggtcacatatccacaatacttgggagacagaagaaacccttaagcagcagaatgtt
agaggaatgaaaaaattagataattataagaaaaaagatcaggaaacaaaaagatggttg
aaaaatgcttctccagaagatgtggaatattataattgccagcaagaacttacagatgat
ctccataagcagtatcaaatagtggagcgaataattgctcattccaatcaaaagtcagct
gctggctatcctgattattattgcaaatggcagggccttccatactcagagtgcagctgg
gaagatggagctctcatttccaaaaagtttcaagcatgcatagatgagtatttcagcagg
aatcaatcaaaaactactccttttaaagactgcaaagttttaaaacaaaggccaagattt
gtagccctaaagaagcagccatcctatattggaggacatgagggattagaattaagagat
tatcaactgaatggtttaaattggcttgctcactcttggtgcaaaggaaatagttgcata
cttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctgaactatttg
tttcatgaacaccaattatatggaccttttctattagtagtaccactctccactctcact
tcctggcaaagggagattcaaacatgggcttctcaaatgaatgctgtggtttatttaggt
gacatcaacagcagaaacatgataagaactcatgaatggatgcatccccagaccaaacgg
ttaaaatttaatatactgttaacaacttatgaaatcttattgaaggataaggcattcctt
ggaggtctaaattgggcatttataggtgtagatgaagcacatcgattaaagaatgatgat
tctcttctgtataaaactttaatagattttaagtccaatcaccgtcttcttatcactgga
actcctctgcaaaactccctcaaagagctctggtctttgctacatttcattatgccagaa
aagttttcttcctgggaagattttgaagaagaacatggcaaaggcagagaatatggttat
gcaagcctccacaaggagcttgagccatttctgttacgcagggttaagaaagatgtggaa
aaatctcttcctgccaaggttgagcagattttaagaatggaaatgagtgctttacagaaa
caatattacaaatggatattaactagaaattacaaagccctcagcaaaggttccaagggc
agtacctcaggctttttgaatattatgatggagctaaagaaatgttgtaaccattgctac
ctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacactta
atccgtagtagcggaaaattaattcttcttgacaaactgttaattcgcctaagagagcga
ggcaatagagttcttattttttctcaaatggtgcggatgttagatatacttgcagaatat
ttgaagtatcgtcaattcccctttcaaagattagatggatcaataaaaggggagctgagg
aaacaagctctagatcattttaatgctgaaggatcagaggatttctgctttttgctttcc
acaagagctggaggtttaggaattaacttagcctcagctgacactgttgttatatttgat
tctgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattgggcaa
aagaaacaggtgaacatttatcgtctagttacaaagggatcagttgaagaggatattctt
gaaagggccaaaaagaagatggttttagatcatcttgtgattcaaagaatggacacaact
gggaagacagtattacacacaggttctgctccatcaagttctactcctttcaataaagaa
gagttatcagccattttaaagtttggtgctgaggaactttttaaggagcccgagggagaa
gaacaagagccccaggaaatggatatagatgaaatcttgaagagggctgaaactcatgaa
aatgaaccaggacctttaactgtaggagatgaattactttctcagttcaaggttgccaac
ttttcaaatatggatgaggatgacattgagttggaacctgaaagaaattcaaagaattgg
gaagaaatcatccctgaagatcaaagaagacgattagaagaggaagaaagacaaaaggaa
cttgaagaaatttatatgctccccagaatgagaaactgtgcaaaacagattagtttcaat
ggaagtgaagggaggcgcagtagaagtaggagatactctggatctgatagtgattcagtc
tcagaaaggaaaaggccaaagaaacgtggaagaccacgaactatccctcgggaaaatatt
aaaggatttagtgatgcagaaattcggcggtttatcaagagttacaagaaatttggtggc
cctctggaaagattagatgcaattgctcgagatgctgaattagttgataagtcagagaca
gacctcagacgactaggagaattggtacataatggttgcattaaagctttaaaggacaat
tcttcaggaacagaacgaacaggtggtagacttggaaaagtaaagggtccaacgttccga
atatcaggagtacaggtgaatgccaagctagtcatctcccatgaagaagaattaataccg
ttgcacaaatccattccttcagatccagaagaaagaaagcagtatatcatcccatgccac
acgaaggcagctcattttgatatagactggggcaaagaagatgattccaatttgttaatt
ggtatctacgaatacggatatggaagctgggaaatgattaaaatggatcctgacctcagt
ctgacacacaagattcttccagatgatcctgataaaaaaccacaagcaaaacagttacag
acacgtgcggactacctcatcaaattacttagtaaagatcttgcaagaaaagaagctcag
aggctttctggtgcaggaggttcaaaaaggaggaaagtaagagctaagaagaataaagca
atgaagtctataaaaatgaaagaggaaataaagagcgattcttctcccctgccctcagaa
aagtctgatgaagatgatgataaggatgagatcacttctgtgaaacatccaaataaaaaa
gttaaaacagaaagagacagtgaagaaaaacctgagccagatgtttgtataaagaaggaa
ccagaagaaaagagggaagcgaaagaaaaggaaaataaaagagaacttaaaagggagata
aaagaaaaagaggataagaaagatataaaggaaaaagattttaaagagaaaagagaaaac
aaagtaaaagaagctatacagaaagaaaaagacataaaggaagaaaagttgagtgaatcc
aagtctgagagcaaggaaagatctaagaaatcttcagtgtcggatgctccagttcatatc
actgcaagtggtgaaccagttcccatatctgaagaatctgaagagctagatcagaagaca
ttcagcatatgtaaagaaagaatgaggcctgtcaaagcagctttgaagcaacttgatagg
cccgagaaaggcctttcagaaagagaacaactggaacatactagacagtgcttaataaaa
attggagaccatatcacggaatgtctgaaagagtatacaaatcctgaacaaatcaagcag
tggagaaaaaacctgtggatttttgtatctaagtttactgagtttgatgcaagaaaatta
cataaattatataagcatgctattaaaaaacggcaggaatctcagcaaaataatgaccag
aacagcaacttgaatactcaagtgattagaaatccagatgtggaaagattaaaagagaat
acaaatcatgatgatagcagcagggacagttactcatctgataggcacttatctcaatat
catgatcatcataaagaccgacatcagggagattcttataaaaagagtgactctaggaaa
agaccctattcttcttttagtaatggtaaagatcatcgtgattgggatcactacaagcaa
gacagcagatactatagtgatagagacaaacacagaaaactggatgatcacaggagtaga
gaccacaggtcaaatttggaaggaagtttaaaagacagaactcattctgatcatcgttct
cattcagatcatcggttgcattcagaccatcggtcaagttctgaatatacacaccataaa
tcttccagggattataggtatcactcagattggcaattggaccatagagcttccagtagt
ggctctagatcaccactagatcagaggtctccttatggctccagatctccatttgaacac
tcagttgaacacagaagtacacctgagcatacctggagtagtcggaaaacataa
DBGET
integrated database retrieval system
