Balaenoptera musculus (blue whale): 118891973
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Entry
118891973 CDS
T09887
Symbol
SYNPO
Name
(RefSeq) synaptopodin isoform X1
KO
K21112
synaptopodin
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118891973 (SYNPO)
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
118891973
NCBI-ProteinID:
XP_036701802
UniProt:
A0A8B8WWS9
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Position
3:125868690..125905321
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AA seq
1150 aa
AA seq
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MLGPHLPPPPLGPSEGKSSPCTFGLPDGSYRCLALEAEESGGEEGLQGEAGLTDLEENEV
ARRSEDNACRATQGAPQLPRARGIQSPRCSREVRGGSQHDNRASQDWDTVKAQQVMTASL
SPSPGPRVAQKPALGRSTSLTEKDLKEAKARSQQIAAQLTTPPSSNSRGVQLFNRRRQRV
NEFTLESRGQRGQKPSQESLRVPPASPTGHAPGLSLSPTSLPEPGPPRNPACQSADTGVP
GHSMEGSSEEASLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSPPTP
PPAEVHSPATDASQNLPSPGATVITPPSNSNHNPPATDVDQNPPATVTPQSLPLSSVQQN
SSEAQLPPKGAVPDFKPSTPCAGGQPQEPAAEVRSSTLLIDKVSAPPTTTSTFSREVTPI
SSSRPPAPDFMSSSLLIDVQLGAPVVSTEQEMSGRAAATTPIKLYSEVHLTLAKPPSVVN
RTARPFGIQAPGGTSQMERSPMVERRHLGEKGPAPRPPSVADRSPRPQRHVMSHSPMLER
RPVAQRSPALERRPLGNFTPPPTYAETLSTAPLASRVRSPPSYSALYPSSDPKPSHLKGQ
AVPASKTGILEESIARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEMGVE
EEPFALGAEASNFQQEPAPRDRASPAGAEEIVPEWASCLKSPRIQAKPKPKPNQNLSEAS
GKGAELYARRQSRMEKYVIESSGHAERARCPSPTMSLPSCWKYPTNAPGGFRVASRSPAR
TPPASLYHGYLPENGVLRPEPSRQPPCQLRPSLFVLSPIKEPAKSSPTAAPPAKPSSLDL
APSLPKAALPPSPALPRPSRSSPGLYTSPGQDGLRPAAVSPTYSSDVSPVSPSRAWSPRA
KQAPRPSFSTRNAGIEAQDRRENLPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSLSS
PPPLPPPPPPPPMSPSWSERSVSPLRPETEARPPSRQLQALLARNIINAARRKSASPRPA
GAESLRPFSPPRALPPPPPPPPPPPPPRMRSPLPARPGQAADPGATFAPIPRSPLPAGPS
PCASPRSPLPAPPRPFPYRRSPTDSDVSLDSEDSGAKSPGILGYNICPRGWNGSLRLKRG
SLPTEASCTT
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgctgggccctcacctcccacccccgcccctggggcccagcgaaggcaagtcctccccc
tgcacatttgggcttcctgacgggagctacaggtgtctggccttggaagccgaggagagc
ggcggcgaggagggcctacagggagaggcggggctcacggacttggaggaaaacgaagtg
gccagaaggagtgaggacaacgcctgcagagccacccaaggggcaccacagcttcccaga
gcccggggcatccagtcacccaggtgctccagggaggtacgagggggttcccagcatgac
aacagagccagccaggactgggacacggtgaaggcccagcaggtgatgacagccagcctc
agccccagccctgggcccagggttgcccagaaaccagcgctgggccggagcactagcctc
accgagaaggatctaaaagaggccaaggcgaggagccagcagatcgcagcccagctgacc
acccctcccagctccaactcccgcggcgtccagctcttcaacaggcgccggcagagggtg
aacgagttcaccttggagagccgcggccagaggggacagaagcccagccaggagtccctc
agggtgccccccgccagccccacaggccatgccccagggctcagcctgagtcccacctca
ctccctgaaccaggccctccgagaaaccccgcctgccagagcgctgacacaggggtccct
ggtcacagcatggagggctcctcagaggaagccagcttgctgcggcacctggagaaagtg
gccagtgaggaagaggaggtaccactggtggtttatttaaaggagaacgcggccctgctg
acggccaatgggctccacctgtcccagaaccgagaagcccagcagagccccccaactcca
cctccggcggaggtccacagcccagccacagatgccagccaaaaccttccctcgcccggc
gccacggtcatcactccaccttccaacagcaaccacaacccgccagccacagatgtcgat
cagaacccacccgcaactgtcaccccgcagagcctgccactgtccagcgtccaacagaat
tcttcagaggcacagctcccgccgaagggtgcagtgccagatttcaaacccagcaccccg
tgtgctggtgggcaaccccaggagccagctgcggaggtgagatccagcaccctactaatt
gataaggtatcagctccacctaccaccaccagcaccttctccagagaagttactcccatc
tccagctccaggcccccagccccagatttcatgtccagctccctgctcattgatgtccag
cttggtgccccagtggtgtccacggaacaagagatgtccgggcgggcagctgccaccacg
cccatcaaactgtacagcgaggtccacctcacgctggccaagcccccatctgtggtcaac
aggacggccaggccctttgggattcaggcgccaggcggcaccagccagatggaacgaagc
cccatggtagagagacgacatcttggagagaagggtcccgctccccggccccccagcgtg
gcagacaggagccctcggccacagagacacgtcatgtcccatagccccatgctggagagg
aggcccgtggcacagcgaagccccgccttggagagacgccccttggggaacttcacccca
cccccaacctatgccgagaccttgtccacggcccccctggcttcccgggttaggtctccc
ccctcttactctgccctgtaccccagctccgaccccaagccgtctcatctaaagggccag
gcagttcctgccagcaagacgggcattttggaggagtcgatagcccgcaggggcagccgg
aaatccatgttcaccttcgtggagaagcccaaggtgaccccgaatccagacctgctggat
ctggtacagacagcagacgagaagcggaggcagagggaccagggggagatgggcgtggag
gaggagcccttcgcgctgggggccgaggcctccaacttccagcaggagcccgccccccgg
gacagggccagccccgcaggggccgaggagattgtccccgagtgggcctcatgcctcaag
tcaccgcgcatccaggccaagcccaagcccaaacccaaccagaacctctccgaggcctct
gggaagggggctgagctctacgcccgccgccagtcccgcatggagaagtacgtcatcgag
tcttcgggccacgcggaacgggcccgctgcccttcacccactatgtccctgccttcgtgc
tggaagtaccccaccaacgcgcctggcggcttccgagtggcgtcccgaagcccggctcgg
accccacctgcctccctctatcatggctacctgcctgagaacggggtcctgcgcccagag
ccctccaggcagccaccctgccagctgcggccctcgctctttgtcctctcacccatcaag
gaacctgccaagtcctcgcccacggccgccccgcctgccaagccgagctccctggacctg
gcgcccagcctgcccaaggcggccctcccaccgtcgcctgccctgcctcggccctcccgc
tcctccccaggcctctacacctcccctggccaggatggcctccggcccgctgccgtgagc
cctacctacagcagtgatgtctcgcccgtgtctccctccagggcgtggtctccccgagcc
aagcaagcccccaggccctccttctccacccggaatgccgggatcgaggctcaggaccgc
cgagagaacctgcccacctccccgccctggacgccgggcgcgtcccggccccccagcagc
ctggacggctgggtgagcccggggccgtgggagccgggccgcgggagcagcttgagcagc
cccccgccgctgccgccgccgccgccgccgccgcccatgtccccctcttggagcgagcgc
tccgtatcccctctgcgacctgagaccgaggcgcggccccccagccgccagctgcaggcg
ctcctggcgcgaaacatcatcaacgcggcccggcgcaagagcgcctccccgcggccggcg
ggagctgagagccttcggcccttctccccgccaagagcgctgccaccgccgccaccgccg
ccgccgccgccgccgccgccgcgcatgcgctcgcccctgccggcccgacccggccaggcc
gcggaccccggggcaacgttcgctcccatcccccggagcccactgcccgccgggccctcg
ccctgcgccagtccccggagcccgctgcccgcgccgcccaggcccttcccctaccgccgc
tcgcccacggactccgatgtgtccctcgactccgaggactctggggctaagtcgcccggc
atcctcggctacaacatctgtccccgcgggtggaacggcagcctgaggctcaagcgtggc
agcctacccacggaggcctcctgcaccacctaa
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