Balaenoptera musculus (blue whale): 118892117
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Entry
118892117 CDS
T09887
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03440
Homologous recombination
bmus03450
Non-homologous end-joining
bmus04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118892117 (RAD50)
03450 Non-homologous end-joining
118892117 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
118892117 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmus03032
]
118892117 (RAD50)
03400 DNA repair and recombination proteins [BR:
bmus03400
]
118892117 (RAD50)
DNA replication proteins [BR:
bmus03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
118892117 (RAD50)
DNA repair and recombination proteins [BR:
bmus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
118892117 (RAD50)
BRCA1-C complex
118892117 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
118892117 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad50_zn_hook
SbcC_Walker_B
AAA_23
DUF2703
Motif
Other DBs
NCBI-GeneID:
118892117
NCBI-ProteinID:
XP_036702191
UniProt:
A0A8B8WY82
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All DBs
Position
3:108991852..109236305
Genome browser
AA seq
1320 aa
AA seq
DB search
MKVAVSNSRRISRRGEGRRVRGGGPGAGELGPQPAPGEMAAGPGLPCTAGSREAAEKQEN
GLPPPEDKNAGHQPWVSLEVAQETDVRAQIRLQFRDVNGELVAVQRSMVCTQKSKKTEFK
TLEGVITRTKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEESNWPLSEGKAL
KQKFDEIFSATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEA
QLTSSKEIVKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQK
MEKVFQGSDEQLNDLYHNHQRTVREKERRLVECQRELEKLNKESRLLNQEKSELLVEQGR
LQLQADRHQEHMRARDSLIQSLATQLELDGFEHGPFSERQIKNFHKLVRERQEKETETAR
LLMNDFAEKETLKRKQIDEIRDEKTGLGRIIELKSEILTKRQNELKNVKYELQQLEGSSD
RILELDQELTKAERELSKAEKNSNVETLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHT
ATRTQMEMLTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRD
RLAKLNKELASAEQNKNHINNELKRKEEKLSSYEDKLFDVCGSQDFESDLDRLKEEIEKS
SKQRAMLAGATAVYSQFITQLTDEDQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKL
KSTESELKKKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQE
TLLGTIIPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEK
QEKQHKLDTVSSKIELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTV
ELSTEVQSLYREIKDAKEQVSPLETTLEKFQQEKEELINKRNTSNKIAQDKINDIKEKVK
NIHGYVKDIENYIQDGKDDYKKQKETELNKVIAQLSECEKHKEKINKEMGIMRQDIDTQK
IQERWLQDNLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIENIKRNHS
LAIGRQKGYEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAI
MKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGD
TPLDMRGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEI
IKSRSQQRNFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSISSLGSNVH
NT seq
3963 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggcggtgtccaacagccggcgtatcagccgtcggggcgaggggcgcagggtg
cggggcggtgggcctggggctggcgagctggggccgcagcccgcgcccggcgagatggca
gcaggccctggacttccctgcactgcaggcagtcgtgaggccgccgagaaacaagaaaat
ggactccctcctcctgaggacaagaatgccggccaccagccatgggtgagcttagaggtt
gctcaagaaacagatgttagagcacagattcgtctgcagtttcgtgatgtcaatggagaa
cttgtagctgtgcagagatctatggtttgtactcagaaaagcaaaaagacagaatttaaa
accctggaaggagtcattactagaacaaagcatggcgaaaaggtcagtctcagctccaag
tgtgcagaaattgaccgagagatgataagttctcttggtgtttccaaatctgtgctaaat
aatgtcattttctgtcaccaagaagagtctaattggcctttaagtgaaggaaaggctttg
aagcaaaaatttgatgagattttttccgcaacaaggtacattaaagccttggaaacactt
cggcaggtacgtcagacacaaggtcagaaagtaaaagaatgtcaaacagaactaaaatat
ctgaagcaaaataaggaaaaagcttgtgagattcgcgatcagattactagtaaggaagcc
cagttaacatcatcaaaggaaattgtcaaatcctatgagaatgaacttgatccattgaag
aatcgtctaaaagaaattgaacaaaatctctctaaaataatgagactcgacaatgaaatt
aaagctttggatagccgaaagaagcaaatggaaaaagataatagtgaactggaacagaaa
atggaaaaggtttttcaagggtctgatgagcagctaaatgatttatatcacaatcaccag
agaacagtaagggagaaagaaaggagactggtagaatgtcagcgtgaactggaaaaatta
aataaagaatctaggcttctcaatcaagaaaaatcagaactacttgttgaacagggtcgt
ctacagctacaagcagatcgtcatcaagaacatatgcgagctagagattcattaattcag
tctttggcaacacaactagaattggatggctttgagcatggaccattcagtgagagacag
ataaaaaattttcacaaacttgtgagagagagacaagaaaaggaaacagaaaccgccagg
ctactgatgaacgactttgcagaaaaagagactctgaaacgaaaacagatagatgagata
agggatgagaaaactggactaggaagaataattgagctaaaatcagaaatcctaactaag
aggcagaatgagctgaaaaatgtgaagtatgaattacagcagttggaaggatcttcagac
aggattcttgaactggaccaggagctcacaaaagctgaacgtgagctaagcaaagctgag
aaaaacagcaatgtagaaactctaaaaacagaagtaataagccttcaaaatgagaaagca
gatctagacaggaccctgcgtaaattggaccaggagatggagcagttaaatcatcataca
gcaacacgtacccagatggagatgctgaccaaagacaaagctgacaaagatgaacaaatc
agaaaaataaaatctaggcacagtgatgaattaacttcattgttaggatattttcccaac
aaaaaacagcttgaagattggcttcatagtaaatcaaaagaaattaatcagaccagggac
agacttgccaaattgaacaaggaactggcttcagctgagcaaaataaaaatcatataaat
aatgagctaaaaaggaaggaagagaagttgtccagctatgaagacaaactgtttgatgtt
tgtggtagccaggattttgaaagtgacttagacaggcttaaagaagaaattgaaaaatcc
tcaaaacaacgagccatgctggctggagctacggcagtttactcgcaattcattactcag
ctaacggatgaagaccagtcgtgttgccctgtctgtcagagagtttttcagacagaagct
gaattacaagaagtcatcagtgatttgcagtctaagctgaggcttgctccagataagctc
aagtcaacagaatcagagctaaagaaaaaagaaaagcggcgtgatgaaatgctgggacta
gtgcccatgaggcaaagcataattgatttgaaggagaaggaaataccagaattaagaaac
aaactgcagaatgtgaacagagacatacagcgcctaaagaatgacatagaagaacaggaa
acactcttgggtacgatcatacctgaggaagaaagtgctaaagtgtgtctgacagatgtt
acaattatggagaggttccagatggaacttaaggatgttgaaagaaaaattgcacagcaa
gcagctaaactccaaggactagatttggatagaactgttcaacaagtaaaccaggaaaaa
caagaaaaacaacacaaattagatacagtttccagtaagattgaattgaatcgtaagctt
atacaggaccagcaggaacaaattcagcacctaaaaagtacaacaaatgaacttaaatca
gagaaacttcagatatccactaatttacaacgtcgtcagcaactggaggagcagactgtg
gaattatccactgaagttcagtccttatacagagaaataaaggatgctaaagagcaggta
agccctttggaaacaacattggaaaagttccagcaggagaaagaagaattaatcaacaaa
agaaatacaagcaacaaaatagcacaggataaaataaatgatatcaaagagaaggttaaa
aatattcatggttatgtgaaagacattgagaattatattcaagatggaaaagacgactat
aagaagcaaaaagaaactgaacttaataaagtaatagctcaactaagtgaatgcgagaaa
cacaaagaaaagattaataaggaaatgggaatcatgagacaagatattgatacacagaag
atacaagaaaggtggctacaggataaccttactttaagaaaaaggaatgaagaactaaaa
gaagttgaagaagaaagaaaacaacatttgaaggaaatgggtcaaatgcaggttttacaa
atgaaaaatgaacatcagaagttggaagaaaaaatagaaaatataaaaagaaatcacagt
ttggcaatagggcgacagaaaggttatgaggaagaaattattcattttaagaaagaactt
cgagaacctcaatttcgggatgccgaggaaaagtatagggaaatgatgattgttatgaga
acaacagagcttgtgaacaaggatctggacatttattataagacccttgaccaagcaata
atgaaatttcacagtatgaaaatggaagaaatcaacaaaattattcgtgacctttggcga
agtacctatcgtggacaagatattgaatacatagaaattcgatctgatgccgatgaaaat
gtatcagcttctgataaaaggcggaattacaactaccgagtggtgatgctaaagggagac
acgcccttggatatgcgaggacgatgcagtgccggacaaaaggtattagcttcactcatc
attcgcctagccctggctgaaacattctgcttaaactgtggcatccttgctttggatgag
ccaacgacaaatcttgaccgagaaaacattgaatctcttgcacatgctctggttgagata
ataaaaagtcgctcacagcagcgtaacttccagcttctggtgatcactcatgatgaagat
tttgtggagctcttagggcgttctgaatatgtggagaaattctacaggattaagaagaac
attgatcagtgctcagagatcgtgaaatgcagtattagttccctaggatctaatgttcat
taa
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integrated database retrieval system
