Balaenoptera musculus (blue whale): 118892159
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Entry
118892159 CDS
T09887
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03018
RNA degradation
bmus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118892159 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
118892159 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118892159 (LSM7)
03041 Spliceosome [BR:
bmus03041
]
118892159 (LSM7)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118892159 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
118892159 (LSM7)
Spliceosome [BR:
bmus03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
118892159 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
118892159
NCBI-ProteinID:
XP_036702301
UniProt:
A0A8B8WYI6
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All DBs
Position
3:complement(169971923..169976808)
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AA seq
156 aa
AA seq
DB search
MSPGPSLRRRQMFPSNASAHGAEQAPCVRRACARGKVQRARRRLLRTTKRPGKMADKEKK
KKESILDLSKYIDKTIRVKFQGGREASGILKGFDPLLNLVLDGTIEYMRDPDDQYKLTED
TRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDA
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccggtcccagcctcaggcgtcggcagatgtttcccagcaacgcgtcggcgcac
ggcgccgagcaggcgccctgcgtccgccgcgcatgcgcgcggggcaaggtacaaagggcg
cggcggcggctcctgcgcacaacgaagcggccgggcaagatggcggacaaagagaagaaa
aagaaggagagcatcttggacttgtccaagtacatcgacaagacgatccgagtgaagttc
cagggaggccgagaagccagtggaatcctgaaagggtttgacccgctgctcaacctcgtg
ctggatggtaccatcgagtacatgagagaccctgatgaccagtacaagctcacggaggac
acccggcagctgggcctggtggtgtgcaggggcacctccgtggtgctcatctgcccgcag
gacggcatggaggccatccccaaccccttcatccagcagcaggatgcctag
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integrated database retrieval system
