Balaenoptera musculus (blue whale): 118892229
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Entry
118892229 CDS
T09887
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118892229 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bmus01009
]
118892229 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bmus04515
]
118892229 (PCDH1)
Protein phosphatases and associated proteins [BR:
bmus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118892229 (PCDH1)
Cell adhesion molecules [BR:
bmus04515
]
Cadherins
Protocadherins
118892229 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
118892229
NCBI-ProteinID:
XP_036702476
UniProt:
A0A8C0CD47
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All DBs
Position
3:complement(117541627..117578323)
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AA seq
1237 aa
AA seq
DB search
MDCRARGLRCPEAALLILEPARMGSLRHSPGPGGQRLLLPALLLALLLLLAPSPGHATRV
VYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL
RECQNQLPGEPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLPIPEN
TNIGSLFPIPVASDRDAGPNGVASYELQVGPEAQELFGLQVAEDQDGKQPQLIVMGNLDR
ERLDSYDLTIKVQDGGNPPRASSALLRVTVLDTNDNAPRFERPSYEAELSENSPIGHSVI
QVKANDSDQGANAEIDYTFHQVPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAK
DRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVS
DRDEGENAAVTCVVAGDVPFQLRQASDTGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVD
SGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVVAEVTASDADSGSNAE
LVYSLEPEPAAKGLFTISPETGEIRVKTSLDREQRESYELKVVAADRGSPSLQGTATVLV
NVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLTVEQDNGDFVI
QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSN
TSHRLLTPQTRLGETVSQVTAEDIDSGVNAELTYSIAGGNPYGLFQIGSHSGAITLEKEI
ERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNDTLANRTLLETLLGHSLDTPLDIDIAG
DPEYERSKQRSNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPK
PSSKVSKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPP
GSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDY
SYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLG
PLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSS
PSRRTKSSALKLSTFVPYQDRGGQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHD
SCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggactgcagggcccgcggcctgcgctgcccagaggcggccctcctgattctggagcct
gcccggatggggtccctgaggcacagcccaggccctggggggcaacggttgctgctgccc
gccttgctgctggcacttctgctgctgctggctccatccccaggccatgccactcgggtg
gtgtacaaggtgccagaggaacaaccgcccaacaccctcattgggagccttgcagccgat
tatggttttccagacgtgggccacctatacaaactagaagtaggcgccccgtacctgcgg
gtggatggcaagacgggcgacatctttaccacagagacctctatcgaccgcgaggggctc
cgtgaatgccagaaccagctccctggtgagccctgcatcctggagttcgaggtgtctatc
acggaccttgtgcagaatggcagcccccggctgctagagggccagatagaggtccaggac
atcaatgacaacacgcccaacttcgcctcaccagtcatcacgctgcccatccccgagaac
accaacattggctcactcttccccatcccggtggcttcggaccgcgatgctggccccaac
ggtgtggcatcctatgagctgcaggtggggcccgaggcccaggagctatttgggctgcag
gtggcagaggaccaggacggaaagcagccgcagctcatcgtgatgggcaacctggaccgg
gagcgcttggactcgtatgacctcactatcaaggtgcaggatggtggcaaccccccacgc
gccagcagcgccctgctgcgagtcaccgtgctcgacaccaatgacaatgcccccaggttt
gagcggccatcctacgaggctgagctgtctgagaacagccccataggacactcggtcatc
caggtgaaggccaatgactccgaccaaggtgccaacgcagagatcgactacacgttccac
caggtgcccgaagttgtgaggcgtcttctgagactggacaggaacacgggacttatcact
gtgcagggccccgtggaccgcgaggacctaagcaccctgcgcttctcggtgcttgccaag
gaccgaggcaccaaccccaagagtgcccgagcccaagtggtggtgaccgtgaaggacatg
aacgacaatgcccccaccattgaaatccggggcatagggctggtgactcaccaagacggg
atggctaacatctcagaggatgtggcagaagagacagctgtggccctggtgcaggtatct
gaccgagatgagggagaaaatgcagctgtcacctgtgtggtggcaggtgacgtgcccttc
cagctccgccaggccagtgacacgggaagtgacagcaagaagaagtacttcctgcagacg
accaccccgctcgactatgagaaggtcaaagactacaccattgagattgtggccgtggac
tctggcaaccccccactctcgagcaccaattccctcaaggtgcaggtggtggatgtcaat
gacaatgcacctgtcttcacccagagcgtcactgaggttgccttcccagaaaacaacaag
ccaggtgaagtggtcgctgaggtcactgccagtgatgccgactcgggctccaatgctgag
ctggtttactctctggagcctgagccggctgccaagggcctcttcaccatctcacctgaa
actggagagatccgggtgaagacatcccttgatagggaacagagggaaagctatgagttg
aaggtggtggcagccgaccggggcagccccagcctccaaggcacagccaccgtccttgtc
aacgtgctggactgcaatgacaatgaccccaagtttatgctgagtggctacaacttctca
gtgatggagaacatgccggcgctgagtccagtgggcatggtgacggtcattgatggggac
aagggggagaacgcccgggtgcagctcacggtggagcaggacaatggtgattttgttatc
cagaacggcacgggcaccatcctctccagcctgagcttcgatcgggagcagcaaagcacc
tataccttccagctgaaggcggtggacggcggcgtcccacctcgctcggcttacgttggc
gtcaccatcaacgtgctggatgagaatgacaatgcaccctttatcaccgccccttccaac
acctcccaccggctgctgaccccgcagacccgtctgggtgagacggtcagccaggtgaca
gctgaggacattgactctggtgtcaacgctgagctgacctacagcatcgccggtggcaac
ccttacggactcttccagattgggtcacattccggtgccatcaccctggaaaaggagatt
gagcggcgccaccacgggctgcaccgcttagtggtgaaggtcagtgaccgtggcaagccc
cctcgctatggcacagccttggtccacttgtatgtcaatgacaccctggccaaccgcacc
ctgctggagaccctgctgggccacagcctggacacgccgctggacatcgacattgctggg
gatccggaatacgagcgctccaagcagcgcagcaacatcctatttggcgtggtggcgggt
gtcgtggccgtggccttgctcatcgccctggccgtgctcgtgcgctactgccggcaacgg
gaggccaagagtggctatcaggctggcaagaaggagaccaaggacctgtatgctcccaag
cccagcagcaaagtttccaagggaaacaaaagcaagggcaagaagagcaagtctcctaag
cccgtgaagccggtggaggacgaggatgaggccgggctgcagaaatccctcaagttcaac
ctgatgagcgatgcccctggggacagcccccgcatccacctgcccctcaactacccacca
ggcagccctgacctcggccgccactatcgctctaattccccgctgccttccatccagctg
cagccccagtcaccctccgcctccaagaagcaccaggtggtgcaggacctgccgccagcc
aacactttcgtaggcactggggacacgacgtccacgggctcagagcagtactccgactac
agctaccgcaccaacccccccaaataccccagcaagcagttacctcaccggcgcgtcacc
ttctccgccaccagccaggcgcaggagctgcaggacccgtcccagcacagttactacgac
agtggcctggaggagtctgagacgccgtccagcaagtcatcctcggggccccgactcggt
cccctggctctgcctgaggatcactatgagcgcaccacccccgatggcagcataggagag
atggagcaccccgagaacgacctgcgccctttgcctgacgtcgccatgacgggcacatgt
acccgggagtgcagtgagtttggccactccgacacgtgctggatgcctggccagtcgtct
cccagccgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggac
cgaggagggcaggagcctgcgggcgccggcagccccagccccccggaagaccggaacacc
aaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgat
tcctgcaaggactcggccaccttggaggaaatccccctgacccagacctcggacttccca
cctgcagccacaccggcatctgcccagacggccaagcgcgagatctacctgtga
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