Balaenoptera musculus (blue whale): 118893393
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Entry
118893393 CDS
T09887
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03022
Basal transcription factors
bmus03420
Nucleotide excision repair
bmus05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118893393
09124 Replication and repair
03420 Nucleotide excision repair
118893393
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
118893393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmus03021
]
118893393
03400 DNA repair and recombination proteins [BR:
bmus03400
]
118893393
Transcription machinery [BR:
bmus03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
118893393
DNA repair and recombination proteins [BR:
bmus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
118893393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
118893393
NCBI-ProteinID:
XP_036704803
UniProt:
A0A8B8X9Z5
LinkDB
All DBs
Position
3:54443241..54463642
Genome browser
AA seq
395 aa
AA seq
DB search
MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHIISLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYDLIKTLKATKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDSNTEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQDIPLEEHNGERFCYACQGELKDQHVYVC
TVCQNVFCVDCDIFVHDSLHCCPGCIHKIPAPSAI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagagcctgaaagaactaagcgatgggaaggaggctatgaaagaacatgggag
attcttaaagaagatgaatcaggatcacttaaagctacgatagaagacattctcttcaaa
gcaaagagaaaaagggtatttgagcaccatggacaagttcgacttggaatgatgcgccat
ctttatgtggtagtagatggatcaagaacaatggaagaccaggatttaaagccaaataga
ctgacatgtactttaaagttgttggaatacttcgtagaggaatattttgatcaaaatcct
attagtcagattggaataattgtaacaaagagtaaaagagctgaaaaactgactgaactc
tcaggaaacccaaggaaacacataatatctttgaagaaagctgtagatatgacttgccat
ggagagccatctctttataactccttaagcatggctatgcagactctaaaacacatgccc
ggacatacaagtagagaagtcctaatcatctttagcagtctcacaacctgtgatccatct
aatatctatgatctaatcaagaccctaaaggcaactaaaattagagtgtctgttattgga
ttgtctgcagaggttcgggtttgcactgtgcttgctcgtgaaactggtggcacataccat
gttattttagatgaaagccattacaaagaattgctgacacatcatgttagtcctccgcct
gccagctcaagctctgaatgctcacttattcgtatgggatttcctcagcataccattgct
tctctgtctgatcaagatgcaaaaccctctttcagtatggcgcatctggatagcaacact
gagccaggacttacattaggaggctatttctgcccccagtgtcgggcaaagtactgtgag
cttcctgttgaatgtaaaatctgtggtcttactctggtgtctgctccccacttggcacgg
tcttaccatcacttatttcctttggatgcttttcaagatattcccctggaagaacataat
ggagaaagattttgttatgcctgtcagggggaactgaaagaccaacatgtctatgtttgc
actgtgtgccaaaatgttttttgtgtggactgtgatatttttgttcatgactctctccat
tgttgtcctggctgtattcataagattccagctccttcagctatttga
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