Balaenoptera musculus (blue whale): 118893889
Help
Entry
118893889 CDS
T09887
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04390
Hippo signaling pathway
bmus04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
118893889 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
118893889 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bmus03000
]
118893889 (SOX2)
Transcription factors [BR:
bmus03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118893889 (SOX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118893889
NCBI-ProteinID:
XP_036705414
UniProt:
A0A8C0CME8
LinkDB
All DBs
Position
4:59464239..59465741
Genome browser
AA seq
323 aa
AA seq
DB search
MYNMMETELKPPGPQQTSGGGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRG
QRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRR
KTKTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMM
QDQLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPG
MALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHM
SQHYQSGPVPGTAINGTLPLSHM
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccag
aagaacagcccggaccgcgtcaagcggcccatgaacgccttcatggtgtggtcccgcggg
cagcggcgcaagatggcccaagagaaccccaagatgcacaactcggaaatcagcaagcgc
ctgggcgccgagtggaaacttttgtcggagacggagaagcggccgttcatcgacgaggcc
aagcggctgcgagcgctgcacatgaaggagcacccggattataaataccggccccggcgg
aaaaccaagacgctcatgaagaaggataagtacacgctgccgggagggctgctcgccccg
ggcggcaacagcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaac
cagcgcatggacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatg
caggaccagctgggctacccgcagcacccgggcctcaacgcgcacggcgccgctcagatg
cagcccatgcaccgctacgacgtgagcgccctgcagtacaactccatgaccagctcgcag
acctacatgaacggctcgccgacctacagcatgtcctattcgcagcagggcacccctggc
atggctcttggctccatgggctcggtggtcaagtccgaggccagctccagcccccccgtg
gttacctcttcttcccactccagggcgccctgccaggccggggacctccgggacatgatc
agcatgtacctccccggcgccgaggtgccggagcccgccgcccccagcagacttcacatg
tcgcagcactaccagagcggcccggtgcccggcacggccattaacggcacactgcccctc
tcgcacatgtga
DBGET
integrated database retrieval system