Balaenoptera musculus (blue whale): 118894199
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Entry
118894199 CDS
T09887
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
118894199 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmus03032
]
118894199 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
bmus03400
]
118894199 (TOPBP1)
DNA replication proteins [BR:
bmus03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
118894199 (TOPBP1)
DNA repair and recombination proteins [BR:
bmus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
118894199 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
118894199
NCBI-ProteinID:
XP_036706013
UniProt:
A0A8B8X8N5
LinkDB
All DBs
Position
4:complement(15010195..15081422)
Genome browser
AA seq
1520 aa
AA seq
DB search
MSQNDKEPLFVKFLKSSDNSECFFKALESIKEFQSEEYLQIITEEEALKMKENDRSLYIC
DPFSGKVFDHLKKLGCRIVGPQVVIFCMHHQRCVPRAEHPVYNMVMSDVTISCTSLENDK
REEVHKYVQMMGGRVYRDLNISVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKIARYTDVNMEDFKCPIFLGCIICVTGLRSLDRKAVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECARRWNVHCVTVQWFFDSVEKGFCQDESIYKTEPRPETKTMPDTSTPT
GQINTTDSRTLSDVSDISNISASCINESICSSVLNSKVETTLENLDVSAFEAPEDLLDGC
RIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWDKSAHRPHVV
GAKWLLECFSKGNMLPEEPYIHANYQPVEIPVSDQPESKTTLLKRKNSSFSKKDFAPNEK
HEEADEDLLSQYATNNPTIVEVAKSEVGPFNDSAHVEPPDDSTHISLQEENQSSVSHCLP
DASTITEEGLFSQKSFLVLGFSNENEFNIATIIRENAGKIVSLQSRVVADYAVVPLLGCE
VQATVGEVVTNTWLVTCIDYQTLIDPKSNPLFTPVPVMAGMTPLEDCVLSFSQCAGAEKD
SLTFLANRLGASVQEFFVRKSNAKKGMFASTHLVLKEPGGSKYEAAKKWNLPAVTIAWLL
ETARLGKRANESHFLIKDSPKEEQSLETETTNGVNLNPDTPEHPVTDLETHRKTAVTPLD
MNRFQSKAFRAVISQHSGQASVSPAAGQPLQKEPSLRLDTPSKFLSKDKLFKPSFDVKDA
LAALETPGGPSQQKRKLSTPLSEVIVRNLKVALANSSRNTVALSASPQLKGAQSEKEEAP
KPLHKVVVCVSKKLSKRQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSVK
ERGIHIVSEHWLLECAQEYKHLPESLYPHTYNPKMSLDISAVQDGRLCNNRLLSADLTTK
DDEPDHLPVEENDTDSMTISNKESATSNGNGRNDSKGALTQTLEMRENFQKQLQEIMSAT
SLVKPQGQRASLSRSGCNSASSTPDSARSARSGRSRVLEALRQSRQTVPDVNTEPSQNEQ
IIWDDPTAREERARLASNLQWPSCPTQYSELQADVKKLEDSPFQEPLHDSEIAEQAVCDP
ENICVTEAPKHPISEELETPIKDSHLIPTPQAPSIAFPLANPPVAPHPREKIITIEETHE
DLKKQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPNCTHIVVGHPLRNEKYLASV
AAGKWVLHRSYLEACRTAGRFMLEEDYEWGSSSILDVLTGISVQQRKLALAAMRWRKKIQ
QRQESGIIEGAFSGWKVILHVDQSREAGFKRLLQSGGAKVLPGHSVSLFKEATHLFSDSN
KLKPDDLGVNIAEAAAQNVYCLKTEYIADFLMQESPPQVENYCLPEAVSFLQNNKEPGPG
FSQKRKAPTEKNKIKRPRVQ
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaaaatgacaaagaaccgttatttgtgaagtttttaaagtcttcagacaattct
gaatgtttttttaaagctcttgagtcaataaaagagttccaatcagaagaatatcttcag
attattacagaagaagaggcattgaaaatgaaggagaatgacagatcactttatatctgt
gacccttttagtggcaaagtctttgatcatctcaaaaagcttggctgcagaattgttggt
cctcaagtagtcatattttgtatgcaccaccaacgatgtgtcccaagagctgaacatcca
gtttataacatggttatgtctgatgtaaccatatcttgtacaagcctggaaaatgataaa
agggaagaagttcataaatacgtacaaatgatgggtggacgcgtatacagagaccttaac
atatcagtaactcaccttattgcaggagaagttggtagcaaaaagtatttagttgctgca
aacctgaagaagcctattttacttccttcttggataaaaacactttgggagaagtcacaa
gagaaaaaaatagctagatataccgatgtaaacatggaagacttcaagtgtcctattttt
cttggttgtataatctgtgtcactggcttacgtagcttagacaggaaagcagttcagcaa
ctcacagttaagcatggaggtcaatacatgggacagttgaaaatgaatgagtgtacacac
ctcattgtgcaagaaccaaaaggtcaaaaatatgaatgtgccaggagatggaatgtacac
tgtgtgactgtgcagtggttttttgacagtgttgagaaaggtttttgtcaggatgaatcc
atatataagacagagcctagaccagaaacaaagactatgcctgatacttcaactcctact
ggccagatcaacacaactgatagtcgtactctttcagatgtcagtgatatttccaacatc
agtgcaagttgcataaatgaatcgatatgtagttcagttcttaatagcaaagtggagact
acacttgaaaatctggatgtcagtgcatttgaggcacctgaagatttattagatggttgt
cggatctatctttgcggttttagtggcagaaagctagataaactgagaagacttattaac
agtggaggtggagttcgttttaatcagctcaatgaagatgtaactcatgttattgtggga
gattatgatgatgaattgaagcagttttgggataaatcagcccacaggcctcatgtagtg
ggagcaaaatggttgctagagtgttttagtaaaggtaatatgcttcctgaagagccatat
atccatgctaactaccagccagtggaaattccagtttcagatcaacctgaaagtaaaaca
acccttttaaaaaggaagaacagcagcttctctaagaaagactttgctcctaatgaaaag
catgaggaagctgatgaagatctgctctctcaatatgcgactaataacccaaccatagtt
gaagttgcgaagtctgaagttgggccctttaatgattctgctcatgtggagccccctgat
gattctactcatatttctctgcaagaagaaaaccagtcttccgtcagtcattgcctccct
gatgcttctacaattactgaagaaggtttatttagccaaaagagttttcttgttttaggt
tttagtaatgaaaatgaatttaatattgcaactatcataagagaaaatgctggaaaaatt
gtgtcacttcagagcagagttgttgctgattatgctgtggttcctctgctggggtgtgaa
gtacaggcaactgtgggagaagttgttacaaatacgtggctggtaacttgtatagactat
cagactttaattgatccaaagtcaaatcctctcttcacaccagtcccagtaatggcagga
atgactcctttagaggattgtgttctttcattcagccagtgtgcaggagctgaaaaagat
tcattgacattcttagcaaatcgccttggagcaagtgttcaagaattctttgttcggaaa
tccaatgcaaagaaaggcatgtttgccagtacacatcttgtattgaaagaaccaggtggt
tctaaatatgaagctgccaagaagtggaatttaccagcggtcactatagcttggctgttg
gagactgctagattgggaaagagagcaaatgaaagccattttctgatcaaagattcacct
aaagaagaacaaagtttggaaactgaaacaacaaacggggtgaatctaaatccagatact
ccagagcatcctgtcacagacctggaaactcacagaaaaacagctgttacacctttagat
atgaaccgctttcagagtaaagctttccgtgcagtgatctcacagcactccggacaggct
tcagtctcccctgcagcaggacaaccacttcagaaggagccctcattacgcctggataca
ccatcaaagtttctgtccaaggacaaactcttcaagccttcctttgatgtgaaggatgca
cttgcagccttggaaactccaggaggtcccagccagcagaaaaggaaactgagtacacca
ctctcagaagtcattgtcagaaacttgaaagttgctttggcaaatagctctcgaaatact
gtcgctctttctgccagccctcaactgaaaggtgcccagtcagaaaaggaagaagctcca
aagccacttcacaaggtagtggtatgtgttagtaaaaaactcagtaagaggcagagtgaa
ctaaatgggattgcagcctctctaggtgcagactacaggtggagttttgatgagacagtg
actcatttcatttatcaagggagaccaaatgacactaatcgggagtataaatctgtaaaa
gaaagaggaatacacattgtttcagagcactggcttttagaatgtgcccaagagtataaa
catcttcctgaatctctttatccacatacttataatcccaaaatgagcttggatatcagt
gcagtgcaagatggcagactttgtaataaccgactactctcagctgatttgacaacgaag
gatgatgagccagatcatttgcctgtagaagaaaatgatacagatagtatgaccatcagt
aataaagaatcagcaacatcaaatggaaatggaaggaatgactctaaaggagctctgaca
cagaccttggagatgagagagaactttcaaaagcagctgcaggagataatgtctgcaact
tcactagtgaaaccccaagggcagagggcttccctttcaagaagtggttgtaacagtgct
tcttcaacccctgacagcgctcgctctgcccgcagcggacgaagtagagtcctagaggca
ctgaggcagtctcgtcaaacagtacctgatgtcaacacagagccctcccaaaatgaacag
atcatttgggatgaccctacagccagggaagagagagcaagacttgccagcaatttgcag
tggcctagttgtcccacacagtactctgagcttcaggctgacgttaaaaaattggaggat
tctcctttccaggagcctttacatgattcagaaattgctgaacaggctgtctgtgatcct
gagaacatatgtgtgactgaagccccaaaacacccgatctctgaagaactggagactcca
ataaaagacagccacctgatccctacgcctcaagcccccagtattgccttccccctagcc
aacccacctgtggctccacaccctagagaaaagattataacgatagaggagactcacgaa
gacttaaaaaaacagtacatatttcagttgtcatctctgaatcctcaagaacgtattgat
tattgtcatctgattgaaaaactaggtggattagtgattgagaagcagtgctttgatccc
aactgtacacacattgttgtgggacatccacttcgaaacgagaagtatttagcttcagtg
gcagctgggaagtgggtgctccatcgctcctaccttgaagcttgcaggactgctgggcgc
ttcatgctggaagaagactatgaatggggaagtagttccatacttgatgttttgactgga
atcagtgtacagcaacgaaaactagcacttgcagcaatgagatggaggaagaaaatccag
caaagacaagaatcaggcattattgagggggcatttagtggatggaaggttattttacat
gtcgatcagtcccgagaagcaggattcaaacgtcttcttcagtcaggaggagcaaaggtg
ctacctggtcattctgtatctttatttaaagaagctacacatctcttttctgactctaat
aaactaaaaccagatgacttgggagttaatatagcagaagctgctgcccagaatgtatac
tgcttgaaaacggaatacattgctgattttcttatgcaggaatcccctcctcaagtagaa
aattactgtctaccagaagctgtttcatttcttcagaataataaggaacctgggcctgga
ttctcacaaaagaggaaagctcctacagagaaaaataaaatcaaacgacctagagtacag
taa
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integrated database retrieval system
