Balaenoptera musculus (blue whale): 118895785
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Entry
118895785 CDS
T09887
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bmus04515
]
118895785 (PCDH18)
Cell adhesion molecules [BR:
bmus04515
]
Cadherins
Protocadherins
118895785 (PCDH18)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
BBS1
TMEM154
PAH
Syndecan
ATG31
MPS-4
Cadherin_C_2
DUF3418
Motif
Other DBs
NCBI-GeneID:
118895785
NCBI-ProteinID:
XP_036709219
EnsemblRapid:
ENSBMSG00010006713
LinkDB
All DBs
Position
5:complement(134066901..134087906)
Genome browser
AA seq
1132 aa
AA seq
DB search
MNAKMHFRFVFALLVVSFNSEVLGKNLKYRIYEEQRVGSVIARLSEDVADILVKLPNPST
VRFRAMQRGNSPLLVVNEDSGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQLFHI
EVEVLDINDNSPQFSRPLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSANDFFN
IEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSNDNS
PAFEQQSYIIQLLENSPIGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKIDSER
GHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMSPGK
EEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCRLHGHGHFKLQKTYENNYLILTNATL
DREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDVNDNPPHFQRSRYEFAISENNSPGAY
ITTVTATDPDLGENGQVTYTMLESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQITF
VVEARDGGSPKQLVSNTTVVLTIIDENDNIPVVIGPALRNNTAEISIPKGAESGFHVTRI
RAMDRDSGVNAELSCSIVAGNEENIFVIDPRSCDIHTNVSMESVPYTEWELSVVIQDKGN
PQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLFATR
CNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRPSPSSSP
TLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQGQY
QPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGFSD
LFLTDGRIPAAMRLCTEECRVLGHSDQCWMPALPSPSSDYRSNMFIPGEEFPAQPQQQHP
HPSLEDDTQPVDAGEKKKSFSTFGKDSPNDEDSGDTSTSSLLSEMSNVFQRLLPPSLDTY
SECSEMDRSNSLERRKGPLSAKTVGYPQGVAAWAASTHFQNPTTNSGPPLGTHSSVQPSS
KWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctaaaatgcactttagatttgtttttgcactcctggtggtatctttcaactcc
gaggtactgggcaagaatttgaaatacaggatttatgaggagcagagggttggatcggta
attgcaagattatcagaggatgtggctgatattttagttaagctacctaatccttctact
gttcgcttccgagccatgcagaggggcaattctcctctactcgtggtcaacgaggatagc
ggggaaatcagcataggggcaaaaattgaccgcgaacaactatgccagaaaaacttgaac
tgttccatagagtttgatgtgatcactctacccactgagcatctgcagcttttccatatt
gaagttgaagtgctggatattaatgacaattctccccagttttcaagacctctcataccg
attgagatatcagagagtgcagcagttgggactcgtatccctctggacagtgcatttgat
ccggatgttggggaaaattccctccacacgtactctctctctgccaatgatttttttaat
atcgaggttcggactaggactgatggagctaagtatgcagaactcatagtggtcagagag
ctggatcgggagctgaagtcaagctatgagctccagctcaccgcctcggacatgggggtg
cctcagaggtctggctcatccatactaaaaatcagcatttccgactctaatgacaacagc
cccgcttttgagcagcagtcttatataatacagctcttagaaaactcccccattggcact
ttgctgctagatctgaatgccactgatccagatgagggcgctaatgggaaaatcgtctat
tccttcagcagtcatgtgtctcccaaaattatagagacttttaagattgattcagaaaga
ggacatttgactcttttcaagcaagtggattatgaaatcaccaaatcctatgagattgat
gttcaggctcaggatttgggtccaaattcaatcccagctcactgcaaaattataattaag
gttgtggatgttaatgacaataaacctgaaattaacataaacctcatgtcccctggaaaa
gaagaaatatcttatatctttgaaggggatcctattgacacatttgttgccttggtcagg
gttcaggacaaggattctgggctgaacggagaaatagtttgtaggcttcacggacatggt
cactttaaacttcagaagacttacgaaaacaattatttaatcttgacaaatgccacgctg
gatagagaaaagaggtctgaatacagtttgactgtaatcgctgaggacaaggggacaccc
agtctctcaacagtaaaacattttactgttcaaatcaatgatgtaaatgacaatccaccc
cacttccagagaagtcgatacgaatttgcaatctcagagaataactcgccaggggcatat
atcaccactgtcacagccacagatcctgatcttggagaaaatgggcaagtcacatatacc
atgttggagagttttatcctggggagttccataactacatatgtaaccattgacccgtct
aatggagccatctatgccctcagaatctttgatcatgaggaagtgagtcagatcactttc
gtggtagaagccagagatggtggaagtccaaagcaactcgtaagcaataccacagttgta
ctcaccatcattgatgaaaatgacaacatccctgtggttataggaccggcactgcgcaat
aataccgcagaaatctccatccccaaaggggctgaaagcggctttcatgtcacaagaata
agggcaatggacagagactctggtgtgaatgctgaactcagctgctccatagtagcaggt
aacgaggagaatatcttcgtaattgatccacgatcatgtgacatccataccaacgtcagc
atggaatctgttccctacacagaatgggagctctcagttgtcatccaggacaaaggcaat
cctcagctgcataccaaagtccttctgaagtgtatgatctttgaatatgcagagtcagtg
acaagtacagccatgacctcagtaagccaggcatccttggatgtctccatgattataatt
atttccttaggagcaatttgtgcagtgttgttggttattatggtgctgtttgcaactagg
tgtaaccgagaaaagaaagacactagatcctacaactgcagggtagcggaatcaacttac
cagcatcacccaaaaagaccctccaggcagatccacaaaggggacatcacattggtgcct
accgtaaacggcactctgcccatcagatctcatcacagaccgtctccttcttcatctcct
accttagaaagagggcaaatgggcagccggcagagtcacaacagtcaccagtccctcaac
agtttggtgacaatctcatcgaaccacgtgccagagaatttctcattagaactcacccat
gccacccctgctgttgagcaggtctcccagcttctttcaatgcttcaccagggacaatat
caaccaaggccaagttttcgaggaaacaaatattccaggagctatagatatgcccttcaa
gacatggacaaatttagcttgaaagacagtggccgtggtgacagtgaagcaggagacagt
gattatgatttggggcgagattctccaatagacaggttgctgggcgaaggattcagcgac
ctgtttcttacagatggaagaattccagcagctatgcggctgtgcacggaagagtgcagg
gtcctgggacactctgaccagtgctggatgccagctctgccctcaccttcctctgattat
aggagtaacatgttcattccgggggaagaattcccagcacagccccagcagcaacatccg
catccgagtcttgaggatgacacccagccggtagatgctggtgagaagaagaagagtttt
tccacttttgggaaggactccccaaacgatgaggactctggggataccagcacgtcctct
ctgctctcggaaatgagcaatgtgttccagcgcctcttacccccttccctggacacctat
tctgagtgcagtgagatggatcgatccaactctctggaacgccggaagggacctttgtca
gccaagactgtgggttacccacaaggggtggcggcctgggcggccagtacgcattttcaa
aaccccaccaccaactctggccccccacttggaactcactccagtgtgcagccttcttca
aaatggttgccggccatggaggagatccctgaaaattatgaagaggatgattttgacaat
gtgctcaaccacctcaatgatggcaaacacgaactcatggatgccagtgagctagtggct
gagattaacaaactgcttcaagatgtccgccagagctag
DBGET
integrated database retrieval system