Balaenoptera musculus (blue whale): 118896058
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Entry
118896058 CDS
T09887
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain isoform X1
KO
K24356
collagen type XXV alpha
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118896058 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bmus00536
]
118896058 (COL25A1)
Glycosaminoglycan binding proteins [BR:
bmus00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118896058 (COL25A1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
118896058
NCBI-ProteinID:
XP_036709670
UniProt:
A0A8B8XPW5
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Position
5:complement(109479836..109958644)
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AA seq
693 aa
AA seq
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MLVKKQAGKGGGREPGSEDRSPAGQRCARTVSPCAALAALLSVVAVMSCLYLGVKTNDLQ
ARIAALESAKGDPSIRLLPDCLDQLKAMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
PAGPPGKRGKRGRRGESGPPGQPGPEGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ
LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG
PPGQKGSVGAPGIPGMNGQKGEPGLPGTGGQNGMPGPKGEPGERGEKGDAGENGPKGDTG
EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGI
KGDRGEAGHPGRGDRGEPGAPGPKGKQGESGTRGPKGSKGDRGDKGDSGALGPRGPPGQK
GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEPGSPGVPGVDGEQGL
KGSKGDMGDPGMPGEKGGIGLPGLPGANGMKGEKGDSGLPGPQGPSIIGPPGPPGPHGPP
GPMGPHGLPGPKGEPGLNGVKGLKGEPGQKGDRGPLGLPGASGLDGKPGSRGTDGPMGPH
GPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGFRGVK
GEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgaagaagcaagcagggaaaggaggggggcgggagccgggctccgaggaccgg
agcccagccgggcagcgttgtgcccggaccgtgtccccgtgcgccgccctggccgccctc
ctgtcagtagtggccgtgatgtcttgtctgtacctgggggtgaaaaccaacgacctccag
gcgaggatcgccgccctcgaatccgccaaaggagacccttccatccgtctgctgcctgat
tgtctggatcagctcaaagcaatggtgcaagagaaagtggagcgacttctggctcagaag
tcctatgaacatatggctaagataagaatcgcaagagaagcaccttcagagtgcaactgc
ccagcaggccctccggggaaacgaggtaaaaggggccgaagaggagaatctggtcctcct
ggtcagcctggtcctgagggccctcctggtccaaaaggtgataagggagaacagggcgat
cagggacctcggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcag
ctcattaaacgccgcctgattaagggtgaccaaggacaggctggacctccaggccctcca
ggacctccaggcccacgagggcctcctggggacacagggaaagatggcccccgcggaatg
ccaggagtgcctggtgaaccagggaaaccaggagaacaaggcttgatgggtcctctgggg
cctccaggacaaaagggttctgttggagcacctggaattccagggatgaatgggcaaaag
ggtgagcccgggttgcctggaacaggaggacagaatggaatgccagggcccaagggagaa
cctggagaacgaggagaaaagggagatgctggagagaatggccccaaaggtgatacaggt
gaaaagggtgaccctggatcgtctgctgcaggaattaagggagagcccggagaatctggt
cgtccagggcaaaagggtgaaccagggcttcctgggcttcctggacttccggggataaag
ggagaaccaggtttcattggtcctcaaggagaaccaggcttaccagggttaccaggaata
aagggcgaccgtggggaggcagggcatcctggaagaggggatcgaggggagcctggagcc
cctggaccaaaggggaaacaaggtgaatcaggaactagaggtccaaaggggtcaaagggc
gaccgtggagacaaaggggactctggagccctgggaccgaggggtccacctggtcaaaag
ggagatcaaggagccaccgagatcatagactacaacggcaacctccacgaagccttgcag
aggattaccaccttaacagtcacgggtccccctggaccacctggacctcaaggactacaa
gggccaaagggagagccaggatctccaggagtcccaggagttgatggagagcagggactc
aaaggttcaaagggagacatgggggacccaggtatgccaggtgaaaaaggaggaattgga
cttcctggattaccgggtgccaatggaatgaaaggagaaaaaggagactcgggattgcca
ggtcctcagggtccttccatcataggcccaccaggcccaccaggtccccatggcccacca
ggccccatgggaccccatggacttcctggaccaaagggtgaaccagggttaaatggtgtt
aaaggattgaagggtgaaccaggtcaaaagggtgacagaggaccccttggtcttccagga
gcatctggcttagacggaaagccaggatcccggggtacagatggccctatgggaccccat
ggccctgcaggtcccaaaggagaaagaggtgaaaaaggagctatgggagagccgggaccc
cgagggccgtatggtcttcccgggaaagatggagagcctggtcttgatggtttccctggt
ccacgaggcgagaagggtgatctaggagaaaagggggaaaagggattccgtggcgttaag
ggggaaaaaggggagccaggccagcctggcctggatgggctggacgccccttgccaattg
gggccagatggattacccatgcctggctgttggcaaaagtga
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