Balaenoptera musculus (blue whale): 118896516
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Entry
118896516 CDS
T09887
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03013
Nucleocytoplasmic transport
bmus03015
mRNA surveillance pathway
bmus03040
Spliceosome
bmus05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118896516 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
118896516 (NCBP1)
03015 mRNA surveillance pathway
118896516 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118896516 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118896516 (NCBP1)
03041 Spliceosome [BR:
bmus03041
]
118896516 (NCBP1)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
118896516 (NCBP1)
Spliceosome [BR:
bmus03041
]
Common components
Common spliceosomal components
Cap binding complex
118896516 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
DUF1690
Cob_adeno_trans
DUF1664
DUF2524
Motif
Other DBs
NCBI-GeneID:
118896516
NCBI-ProteinID:
XP_036710268
UniProt:
A0A8B8XKG6
LinkDB
All DBs
Position
6:82202386..82243303
Genome browser
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIVKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSTLCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQDDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMSKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
MFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcacggcgacggcacagcgacgagaacgatgggggacagcctcacaaaaggagaaag
acctctgatgcaaatgaaactgaagatcatttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttggagagcaacctagaaggcttggctggcgttttggaagctgat
cttcctaactataagagcaagatcttaaggcttctttgtacagttgcacgtctgttacct
gagaagttgacaatttatacaacattagttggactactaaatgccaggaattacaacttt
ggtggagaatttgtagaagccatgattcgtcaacttaaagaatcgttgaaagcaaacaat
tataatgaagctgtatatttggtccgttttttatctgatcttgtgaattgtcacgtcatt
gctgccccatcaatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtgcctcaggtgcgccgggattggtacgtgtatgcctttctatcatctttgccctgggtt
ggaaaggagttgtacgaaaagaaagatgcagagatggaccgaatctttgccaacactgaa
agctatcttaaaagacgccagaagactcatgtgcccatgttacaagtatggactgcagag
aaaccgcatccacaagaagagtatttagattgcctctgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctg
tgtgaagcactgcagcacaacctgcctcctttcacaccacctcctcacactgaagattcg
gtgtacccgatgccaagggtcatcttcagaatgtttgattacacggatgatcctgagggt
cctgtaatgccagggagtcattcagtggaaagatttgtaatagaagagaatcttcactgc
attgttaagtcccactggaaggaaaggaagacttgtgctgcacagctggtgagttatcct
gggaagaacaagatccccttgaactaccacatagttgaggtgatatttgcagagctgttt
caacttccagcaccccctcacattgatgtgatgtacacaacacttctcattgaactgtgt
aaacttcagcctggctctctaccccaagttcttgcacaggcaactgaaatgttatacatg
cgtttggacacgatgaatactacatgcgtagacaggtttattaactggttttcccatcat
ctaagtaactttcagttccgttggagctgggaagattggtcagattgtcttactcaagat
ccagaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgtatgaggttgtct
taccatcagcgtatattagatattgtccctcctaccttctcaactctatgtcctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaactctcttcctggacattcggtt
gccctctgtttagctgttgcctttaaaagtaaagcaaccaatgatgaaatcttcagcatt
ctgaaagatgtaccaaatcctaaccaggatgacgatgatgatgaaggattcagctttaac
ccattgaaaatagaggtctttgtacagactctgctacacttagcggccaagtcattcagt
cactccttcagtgctcttgcaaagtttcatgaagtcttcaaaaccctagctgaaagtgat
gaaggaaaattacatgttctaagagtcatgtttgaggtctggcggaaccatccacagatg
attgctgtactagtagataagatgattcgtacacagattgttgactgtgctgcagtagca
aattggatcttctcttcagaactatctcgtgactttactagattgtttgtttgggaaatc
ttgcactccacaattcgtaagatgagcaaacacgttcttaagatccagaaagagctagaa
gaggctaaagaaaaactcgcaaggcaacataaacggcgaagtgatgatgatgacagaagc
agtgacaggaaagatggggctcttgaggaacaaatagaaagactgcaggaaaaagtggaa
tctgctcagagtgaacaaaagaatctcttccttgtcatatttcagcgttttatcatgatc
ttgaccgagcacttagtacgatgtgaaactgacgggaccagtgtattaacaccgtggtat
aagaactgtatagagaggctccagcagatcttcctacagcatcaccaaataatccagcag
tacatggtgaccctggagaacctgctcttcactgctgaattagaccctcatatcctggct
atgttccagcagttctgtgccctgcaggcctaa
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