Balaenoptera musculus (blue whale): 118896705
Help
Entry
118896705 CDS
T09887
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bmus03000
]
118896705 (RC3H2)
04121 Ubiquitin system [BR:
bmus04121
]
118896705 (RC3H2)
Transcription factors [BR:
bmus03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
118896705 (RC3H2)
Ubiquitin system [BR:
bmus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118896705 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
118896705
NCBI-ProteinID:
XP_036710803
UniProt:
A0A8B8XLY2
LinkDB
All DBs
Position
6:complement(104167289..104218679)
Genome browser
AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAIRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSTETTGKIVPSTNGISNAENSVSQLIPRSADSTLRALETVKKVGKVGTNGQNAAGPSAE
SVSENKIGSPPKTPVSNIAATSAGPTNVGTELNSVPPKSSPFITRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASMPYADHYST
FSPRDRMNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTTVPLPREPCGHLKTSCEEQIRRKPE
QWAQYHTQKAPLVSSTLPVATQSPTPPSPLFSVDFRTDFSESVSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATS
SAHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLTLNLLSKEIELRNGESDYTEDAADTKPDRDIELELSALDTDEPDGQGEQIEEILDI
QLGISSQNDQLLNGTGVENGHPVQQHQKEPLEQKRQSLGEDHVILEEQKAILPVTSCFSQ
PLPVSISNASCLPLATSVSVGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccatcagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgatcagactgccatcaacacagac
attgatgtgcttcctgtcaacttcgcacttctccagttagttggagcccaggtaccagat
catcaatcagtaaagttaagtaatttaggtgagaacaaacactatgaggttgcaaagaaa
tgtgttgaggatttggcactctacttaaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactggtgacacttgtaaactgt
caactggtggaggaagaaggtcgtgtaagagccatacgagcagcccgttcacttggagaa
agaactgtaacggaactaatattacagcaccagaaccctcagcaattgtctgccaactta
tgggctgctgtcagggctcgaggatgccagtttctagggccagctatgcaagaagaggcc
ttgaagctggtgttgctggcattagaagatggttctgctctctcaaggaaagttctggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcttgttttaaggttaccaaaagggatgaagac
tcttccctgatgcagctaaaggaggaatttcggagttatgaggctttacgcagagaacat
gatgcccaaattgttcatattgctatggaagcaggactccgtatttcacctgagcagtgg
tcttcacttctatatggtgacttggcgcataaatcacacatgcagtctatcattgataag
ctgcagtctccagaatcatttgcaaagagtgttcaggaattgacaattgttttgcaacga
acaggtgacccagctaacttaaatagactgaggcctcatttagagcttcttgcaaacata
gaccctaatccagatgctgtttcaccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatggccttgtggacttcatacaaaattatagtagaaaaggccat
gagacacctcagcctcagccaaacagcaaatataagactagcatgtgccgagatttgcga
cagcaaggagggtgtccacgaggaacaaattgtacttttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgcaacagtaagaacgtttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagtactgaaacaacggggaaaattgttccaagtacaaacggaatttcaaatgcagaa
aacagtgtttcccagctaattccacgtagtgctgacagtacattaagagctctggagact
gtgaagaaagtggggaaggttggcactaatggtcagaatgctgctgggccttctgcagag
tctgtatctgaaaataaaattggttctccacccaagactcctgtaagtaatatagcggct
acctcagctgggcccactaatgttggaacagagctgaattctgtgcctccaaaatccagc
ccatttataactagagtaccagtatatcctcagcattctgaaaacattcagtattttcaa
gatccaaggactcagataccctttgaagtcccacagtacccacagacaggatactaccca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aatgttccagagtcctccctcccacctgcttccatgccatatgctgatcattacagtaca
ttttcgcctcgagatcgaatgaattcttctccttaccaacctcctcctccgcagccgtat
ggaccagttcctccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatc
tggcgcccacctatgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcactcgtctgtgtatcagacgtctttgcgggaaagatataactcattagat
gggtattattcagtggcttgtcagccaccaagtgagccaaggacaactgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagag
cagtgggcacagtaccacactcagaaagcacctcttgtctcttcaactcttcctgtggca
acacagtcaccaacgccaccttctcctctattcagtgtagactttcgcactgatttctct
gaaagtgtgagtggcacaaaatttgaagaagatcatctttcccattattccccctggtct
tgtggcaccataggttcctgtataaatgctatcgattcagagcccagagatgtaattgct
aattcaaatgctgtgttaatggacctggacagtggagatgttaagagaagagtgcattta
tttgaaactcagagaaggacaaaagaagaagatccaataattccttttagtgatggacct
atcatctcaaaatggggtgcaatttctagatcttcccgtacaggttaccataccacggat
cctgtccaggccactgcttcccaaggaagtgctactaagcctatcagcgtatcagattat
gtcccttatgtcaatgctgttgattcaagatggagttcatatggtaatgaagctacatca
tcagcacattatattgaacgggacagattcattgttaccgatttatctggtcatagaaag
cattccagtactggagaccttttgagcattgaacttcagcaggccaagagtaactcgttg
cttcttcagagggaggccaatgctctggccatgcaacagaagtggaattccctggacgaa
ggccgtcaccttaccttaaatcttctaagcaaggaaattgaactgagaaatggagagagt
gattatacagaagatgcagccgatactaagcctgatagggatatagagttagagctttca
gcacttgatactgatgaacctgatggacaaggtgaacagattgaagagatcctggacata
cagcttggtatcagttctcaaaatgatcagttactgaatggaacaggagtagaaaatggg
catccagtccagcaacaccaaaaggagcccctggagcagaagagacagagtttaggtgaa
gaccatgtgattctggaggagcaaaaagcaattctgccggtaacttcttgctttagtcag
ccactcccagtgtccattagcaatgcgagttgcctccctcttgccacatctgtcagtgtt
ggcaacctcattctgaaaactcatgttatgtctgaagataaaaacgacttcttgaaacct
gttgcaaatgggaagatggttaacagctga
DBGET
integrated database retrieval system
