Balaenoptera musculus (blue whale): 118896738
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Entry
118896738 CDS
T09887
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors isoform X1
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bmus04121
]
118896738 (TOPORS)
03036 Chromosome and associated proteins [BR:
bmus03036
]
118896738 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
bmus03037
]
118896738 (TOPORS)
Enzymes [BR:
bmus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118896738 (TOPORS)
Ubiquitin system [BR:
bmus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118896738 (TOPORS)
UBL E3 ligases
118896738 (TOPORS)
Chromosome and associated proteins [BR:
bmus03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
118896738 (TOPORS)
Cilium and associated proteins [BR:
bmus03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118896738 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI_Topors
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
118896738
NCBI-ProteinID:
XP_036710909
UniProt:
A0A8B8XMV5
LinkDB
All DBs
Position
6:36248090..36258638
Genome browser
AA seq
1044 aa
AA seq
DB search
MGSQQPPGSPLSREEGEAPLPTPAPEGRRRSRRVRLRGSCRHRPSFLGRRELATSSPAGP
APVSSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCL
HKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFVTPDVRRFR
YRTTMTRERSASIYSPNSAMNRRTTTPPDSGVIFEGLGISARARDGEIPPFMRQIAIRRP
ATADERSLRKIQEQDIINFRRTLYRAGARVRNIEDGGRYRDISAEFFRRNPACLHRLVPW
LKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISFA
RSPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDEAETQELDVNVATVSQAPWDDE
TPGPSYSSSEQVHAAMSSLLNTSDSSDEELVTGRATSQMQAVQTNDNINNDSDSSSDNCV
IVGFVKPLAERTPELVELSSDSEELGSYEKMETVKAQEQEQSYSSGDSDVSRCSSPHSIL
GKDEQINKGHCDSGTRIKSKKEEKRSVSLSSPRDLSSSIRGDRVYSPYTRRHRRRGRSRS
SDSCSQGRSGHDQKNRRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQT
LSLSSESTSRSRSRSSDRGKRRSRSRNRDRYYLRNNYGSRYKWEYTYYSRNKDRDGYESS
YRRRTLSRAHYSRQSSSPEFRIQSFSERTNARKKNNHGERKYYYYERHRSRSLSSTRSKT
TSTGPDRVRNEKPGGKRKYKTRHLEGSNDVAQPSREFASKVKEGHYSKSSSKLDGSYKNE
SDSFSDSRSSDRETKHKRRKRTRSLSVEIVYEGKATDTTRHHKKKKKKHKRKHKKHHGDN
ASHSPVVITIDSDSDKDSEVKEDTERDLSGPQDPLQNEFLVPSLEPFETKDVVTIEDEFG
VLGKECDITTLNNNLNNANKTVDNISPQAASIEQTLDVREENTFASDLESQTSNVSYQIE
SSRRLPSPRISLMSVSLGRDHDMS
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgcagcagccgccggggtctccgctgtctcgcgaggagggtgaagcgcccctg
cctactcccgctcctgagggccggcggagaagtcgccgggttcgccttcgcgggtcctgc
cgtcaccgacccagctttctgggccgtcgggagcttgccacgagctccccagccgggcct
gcgcctgtatcctccgagataatggcatcagctgctaaggaatttaaaatggacaacttt
tcacctaaagctggcactagcaaattgcaacagacagtaccagctgatgcatctcctgat
tctaagtgtcctatatgcttggataggtttgataatgtgtcttacttagatcgctgttta
cataagttctgttttcgctgtgtacaggagtggtcaaaaaacaaagctgaatgtccacta
tgtaaacagccctttgattctattttccattctgtgagggcagaagacgacttcaaggag
tatgtactaaggccttcgtacaatggttcttttgttacccctgatgttcgacgattccgc
tatcgtacaactatgacaagggaacgaagtgcttctatttattcacctaacagtgccatg
aatagaagaacaacaactccaccagatagtggagtaatatttgaagggttaggcatttca
gcaagagctagagatggtgaaattcctccatttatgagacagattgcaataaggaggcca
gctactgcagatgaaagatctttgcggaaaattcaagaacaggatattattaattttagg
cgaactctctatcgtgctggtgctcgagttagaaatattgaagatggtggccgctatagg
gatatttcagctgaatttttccgtagaaatccggcttgccttcacagattagtcccctgg
ttaaaacgtgaactcacagttctctttggagctcatggatcattagtgaatattgtccag
catatcatcatgagtaatgttactcgctatgacttggagagtcaggcatttgtgtctgat
ttaaggccatttttacttaatcggactgagcattttatacacgaatttatcagttttgcc
cgatctccatttaacatggcagcctttgaccagcatgcaaattatgattgtcctgctcct
tcatatgaagaaggtagccattctgattcttcggtcataacaatatctcccgatgaagca
gagacccaagagctggatgttaatgtagctactgttagtcaggcaccatgggatgatgaa
actccagggccatcttattcaagctcagagcaggtacatgctgccatgtcttccctttta
aatacttccgacagttcagatgaagaacttgtaacaggaagagccacatctcagatgcaa
gcagtacaaaccaatgacaacataaataacgacagtgattcttcttcagataattgtgtc
attgttgggtttgttaaaccactagctgagaggaccccagaacttgttgaactgtcctct
gattctgaggagttaggttcctacgagaaaatggagaccgtgaaggcacaagaacaagag
cagtcttacagttctggtgatagtgatgttagtagatgttcatctccacactctatcctt
ggaaaggatgaacaaataaataaaggtcattgtgattctggtacaagaatcaaatcaaag
aaggaagagaaacggtctgtatcattgtcctctcccagagacctgagctcatccatcaga
ggagacagggtatattccccatatacccgcagacacagaaggaggggaagatccagaagt
tcagattcatgttcccagggtaggagtgggcatgatcagaagaatcgtaggaagcatcat
gggaagaaaagaatgaaaagcaaacgatccagaagcagggagagtagcagacctagaggc
agaagagacaaaaagagatcaagaactagagatagcagttggtcaagaagaagccaaact
ctgtctctaagtagtgaaagcacaagcagatcaagatctcgtagcagtgatcgtggtaaa
agaagatcacggagcagaaatcgagatcgttactatttaagaaataattatggaagcaga
tataagtgggagtatacttactatagtagaaacaaggacagggatggctacgaatcatct
tacaggaggaggactctgtccagagctcactattccagacaatcttcaagtccagaattt
agaattcagtctttttctgaaagaacaaatgctaggaaaaaaaataatcacggtgaaagg
aaatattactactatgaaaggcatagatcaaggagcctatctagtactagatcaaagact
acatctacagggcctgaccgggtgagaaatgaaaagcctggcgggaaacgaaaatacaaa
acacggcatttggagggttctaacgacgtggcccaaccatctcgggaatttgcttctaaa
gtaaaggaaggtcattactcaaaatcttcatcaaaattggatggaagctacaaaaatgag
agtgacagcttttcagatagccgatcgtcagacagagagacaaagcacaagagaagaaaa
aggacccggagcttaagtgtagagatagtttatgaagggaaagctaccgatacaactagg
caccataaaaagaaaaagaaaaaacataagaggaagcataagaaacaccatggcgataat
gcttcacattccccagttgtgattaccattgacagtgacagtgataaggattctgaagta
aaggaggatacagaacgtgaccttagtggtcctcaagaccctctacaaaacgaatttttg
gttccttccttggaaccatttgaaactaaagatgtagttacaatagaagatgaatttggt
gtcctgggcaaggagtgtgatattaccacacttaataacaacttgaataatgccaacaaa
actgtagataatatttcaccccaggcagcttcaattgaacagactcttgatgtaagagaa
gagaacacctttgcctctgatttggagagccagaccagtaatgtctcttaccagattgag
tcatcaaggcgattgccatctccacggatatcattaatgtcagtgtctcttggtagagac
catgatatgtcttaa
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integrated database retrieval system
