Balaenoptera musculus (blue whale): 118896790
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Entry
118896790 CDS
T09887
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118896790 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmus03041
]
118896790 (PRPF4)
Spliceosome [BR:
bmus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
118896790 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
PRP4
Beta-prop_EML
WDR90_beta-prop_4th
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
118896790
NCBI-ProteinID:
XP_036711041
UniProt:
A0A8B8XNI3
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All DBs
Position
6:95803104..95822740
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AA seq
521 aa
AA seq
DB search
MASSRASSAATKTKASDDLVAPVVKKPHIYYGSLEEKERERLAKGESGILGKEGLKAGIE
AGNINITSGEVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITL
FGEGPAERRERLRNILSVVGTDALKKTKKDDEKSKKSKEEYQQTWYHEGPNSLKVARLWI
ANYSLPRAVKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFSP
NSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCAA
DGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQ
EGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYH
VATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHPG
WSPLKTLAGHEGKVMGLDISSNGQLIATCSYDRTFKLWMAE
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctcacgagcctcctccgcggcaaccaaaactaaggcatctgatgacttagtc
gctcctgttgtgaagaaaccacacatctattatggaagtttggaagaaaaggagagggag
cgcctggccaaaggagaatctgggattttgggaaaagaaggacttaaagcaggaattgaa
gcagggaacattaacataacctctggagaagtgtttgaaattgaagagcacatcagtgag
cgacaggccgaagtgttagctgagtttgagaggaggaagcgagcccggcaaatcaatgtt
tccacagatgactcagaggtcaaggcttgccttagggccttgggggaacccatcacactt
tttggagagggtcctgctgaaagaagagaaaggttaagaaatatcctttcagtggtcggt
actgatgccttaaaaaagaccaaaaaagatgatgagaaatcaaagaagtccaaagaagag
tatcagcaaacctggtaccatgaaggaccaaacagcctgaaggttgctagactgtggatt
gctaattattcactgcccagggcagtgaaacgcttggaggaggcccgtcttcataaagag
attcctgagacaacgagaacctcccagatgcaagagctgcacaaatctctccggtctttg
aataatttctgcagtcagattggggatgatcggcctatctcctactgtcactttagtccc
aattccaaaatgctggccacagcttgttggagtgggctttgcaagctctggtctgttcct
gattgcaacctcctccatactcttcgaggccataacacaaacgtgggagcaattgtattc
catccaaaatccactgtctccttggaccaaaaagatgtcaatctggcctcttgtgctgct
gatggttctgtgaagctttggagccttgacagtgatgagccagtggcagatattgaaggc
cacacagtgcgtgtggcccgtgtaatgtggcatccatcaggacgtttcttaggtaccacc
tgctatgaccgttcatggcgcttatgggatttggaggctcaagaggaaatcctgcatcag
gaaggccacagcatgggtgtgtatgacattgccttccatcaagatggctccttggctggc
acggggggactggatgcatttggtcgagtttgggacctgcgtacaggacgttgcatcatg
ttcctagaaggtcacctgaaggaaatctatggaataaatttctcccccaatggctaccac
gttgcaactggcagtggtgacaacacttgcaaagtgtgggaccttcgacagcggcgttgt
gtctataccattcctgcccaccagaacttagtgactggtgtcaagtttgaacctatccat
gggaatttcttgcttactggtgcctatgataacacagccaagatctggacccacccaggc
tggtcgccactgaagactctggccggccacgaaggcaaagtgatgggcctagacatttct
tccaatgggcagctcatagccacttgctcatatgacaggaccttcaagctctggatggct
gaatag
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integrated database retrieval system
