Balaenoptera musculus (blue whale): 118897097
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Entry
118897097 CDS
T09887
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03015
mRNA surveillance pathway
bmus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118897097
09123 Folding, sorting and degradation
03018 RNA degradation
118897097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118897097
03041 Spliceosome [BR:
bmus03041
]
118897097
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118897097
mRNA cycle factors
Stress granule specific factors
118897097
Spliceosome [BR:
bmus03041
]
Complex C
Other components
Complex C specific factors
118897097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_Nup35
RRM_occluded
RRM_5
RRM_7
RBD_RDR6
RRM_10
RRM_3
Motif
Other DBs
NCBI-GeneID:
118897097
NCBI-ProteinID:
XP_036711813
UniProt:
A0A8B8XPP5
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All DBs
Position
6:37048243..37050358
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AA seq
660 aa
AA seq
DB search
MNAVASSYPMAXLHVGALHYDVTEVILYGKFSPAGPVLSIRVCRNMITCRAQGYAYVNFQ
QPADAERALDTMNFDMIKLKPVRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYGTFS
AFGNILSCKVVCDENGSKGYAFVHFETQEAADKAVENVNGMLLNGHKVFVGRFKSRKEWE
AELGAKAKEFTNVYFKNVGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEK
HEDASKAVEEMNGKEISGKVIFIGYAQKKVEQQAVLKRKFEQLKQERISRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFSFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKGHLTNQYMQRVAGMRALPTNAILNQLQPAAGGCFVPEVPQAQGRP
PYYTPNQLAQMRPNPRWQQGGRPQGFQGMPTAIRQSGPCPALCHLAPTGNAPASRGLPIT
AQRVGSECPDRLAMDFGGAGAAQQGPTDSCPSGGVLTAGQNLVPRAAVAAAAPQAVAPYK
YASSVRRPHPAIRPLQAPKPAVHVQGQEPLTAAMLAAAPXQEQKQMLGERLFPLIQTMHS
NLAGKITGMLLEIDISELLHMLESPESLHSKVDEAVAILQAHHAKKETAQKVGAVAAATS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctgtggccagcagctaccccatggccntcctgcacgtgggtgccctgcactac
gacgtcaccgaggtcatcctgtacggaaagttcagtcctgcggggcctgtgctgtccatc
cgggtctgccgcaatatgatcacctgccgtgcccagggttatgcctacgtcaacttccag
cagccggctgacgctgagcgggccttggataccatgaactttgatatgattaagttaaag
ccagtccgtatcatgtggtctcagagggatccttctttgagaaaatctggcgtgggaaat
gtcttcatcaagaacctggacaaatctatagataacaaggcactttatggtactttttct
gcttttggaaacattctgtcctgcaaggtggtgtgtgatgagaacggctctaagggttat
gcctttgtccacttcgaaacccaggaggctgccgacaaggccgttgagaatgtgaacggc
atgctcctcaatggccacaaagtgtttgtgggcagattcaagtctcgaaaagagtgggaa
gctgagcttggagccaaagccaaggaattcaccaatgtttatttcaaaaacgttggggaa
gaggtggatgatgagagtctgaaagagctattcagccagtttggtaagactttaagtgtc
aaggtgatgagagatcccagtgggaaatccaaaggctttggctttgtgagttacgaaaaa
cacgaggatgccagtaaggccgtggaagagatgaatggaaaagaaatcagtgggaaagtc
attttcatcggctatgcacagaagaaagtggaacagcaggccgtgttaaagcgaaaattt
gaacagctgaaacaggagagaattagtcgctatcagggggtgaatctctacattaagaac
ttggatgacaccattgatgatgagaagttaaggaaagagttttctccttttggatcaatc
accagtgccaaggtgatgctggaggatgggagaagcaaagggtttagctttgtctgcttc
tcatcccctgaagaggcaaccaaagcagtcacggagatgaacggacgcatcgtgggctcc
aagccactgtatgtcgccctggcccagagaaaggaagagagaaagggtcacctgaccaac
cagtatatgcagcgggtggccgggatgagagcgctccccaccaatgccatcttaaatcag
ctccagcctgcagctgggggctgctttgtgccagaagttccacaggctcagggaagacct
ccatattacacacctaaccagttagcacagatgaggcctaatccacgctggcagcaaggt
gggagacctcaaggcttccaaggaatgccaactgctatacgccagtctgggccttgtcca
gctctttgccatctggctccaactggtaatgctccggcctctcgcggcctccctattacc
gctcagagggtcgggtctgagtgcccggaccgcttggctatggactttggtggggctggt
gccgcccagcaagggccgactgacagctgcccgtctggaggtgttcttacagctgggcag
aacctagtgcctcgtgctgctgttgctgccgctgctcctcaggctgttgcaccttacaaa
tacgcctccagtgtccgcagacctcaccctgccatccggcccctgcaggcacccaagcct
gcggtccatgtgcaggggcaggagccgctgaccgccgccatgctggccgcagcacccntt
caggaacagaagcagatgctgggtgaacgtttgttcccgctcatccagacgatgcactca
aacctggctgggaagattacggggatgctgctggagattgacatctcggagctgctgcac
atgctggagtcccccgagtctctccactccaaggtggatgaagctgtggccatcctacag
gctcatcatgccaagaaagaaactgcccagaaggtgggcgctgtcgctgctgctacctct
tag
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