Balaenoptera musculus (blue whale): 118897512
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Entry
118897512 CDS
T09887
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4 isoform X1
KO
K03679
exosome complex component RRP4
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118897512 (EXOSC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmus03019
]
118897512 (EXOSC2)
Messenger RNA biogenesis [BR:
bmus03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
118897512 (EXOSC2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
118897512 (EXOSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
EXOSC1
RRP40_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
118897512
NCBI-ProteinID:
XP_036712688
UniProt:
A0A8C0I5F6
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All DBs
Position
6:110783883..110798383
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AA seq
293 aa
AA seq
DB search
MAMEMRLPVARKPLSESLGRETKKHLVVPGDTITTDTGFMRGHGTYMGEEKLIASVAGSV
ERVNKLVCVKALKTRYHGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAKDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKLGQGVLVQVSPSLVK
RQKTHFHDLPCGASVILGNNGFIWIYPTPEHKEEDAGGFTANLEPVSLADREVISRLRNC
IISLATQRMLLYDTSILYCYEASLPHQIKDILKPEIMEEIVMETRQRLLEQEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggagatgaggcttcccgtggctcgcaagcctcttagcgagagcctgggccgt
gaaacgaaaaaacacctggtagtgccgggggacacgatcaccacggacacaggcttcatg
cggggccatgggacctatatgggggaagagaagctcattgcatctgtggctggctctgtg
gagagagtaaacaagttggtctgtgtgaaagctttgaaaaccagatatcatggtgaagtg
ggagacattgtagtggggagaatcacagaggttcaacagaagaggtggaaggtggagacc
aactccaggctggattcagtcttgcttctctcatccatgaaccttcccggaggagagctg
aggagaagatctgcaaaagatgagctggcgatgagaggtttcttgcaggaaggggacctt
atcagtgctgaggtccaggcagtgttctctgatggagctgtctctctgcacacgaggagt
ctcaaatacgggaaactaggccagggcgttttggttcaggtctccccctccttggtgaaa
cggcagaagactcacttccatgacttgccatgcggtgcctcagtgattctgggcaacaac
ggcttcatctggatctacccaacacctgagcacaaagaagaggatgcagggggcttcact
gcaaacctggagcctgtctcccttgctgatcgagaggtgatctcccggcttcggaactgc
atcatctcgctggcaactcagagaatgctgctgtatgataccagtatcctgtattgctat
gaagcatcccttccacatcagatcaaagacatcttaaagccagaaataatggaggaaatt
gtgatggaaacacgccagaggcttttagaacaggagggataa
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