Balaenoptera musculus (blue whale): 118897848
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Entry
118897848 CDS
T09887
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain isoform X1
KO
K19720
collagen type III alpha
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04611
Platelet activation
bmus04820
Cytoskeleton in muscle cells
bmus04926
Relaxin signaling pathway
bmus04933
AGE-RAGE signaling pathway in diabetic complications
bmus04974
Protein digestion and absorption
bmus05146
Amoebiasis
bmus05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118897848 (COL3A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
118897848 (COL3A1)
09152 Endocrine system
04926 Relaxin signaling pathway
118897848 (COL3A1)
09154 Digestive system
04974 Protein digestion and absorption
118897848 (COL3A1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
118897848 (COL3A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
118897848 (COL3A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
118897848 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bmus00536
]
118897848 (COL3A1)
Glycosaminoglycan binding proteins [BR:
bmus00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118897848 (COL3A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
118897848
NCBI-ProteinID:
XP_036713143
UniProt:
A0A8B8XTC9
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All DBs
Position
7
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AA seq
1501 aa
AA seq
DB search
MVSFVQKGTWLLFALLHPTVILAQQEVVEGGCSHLGQSYADRDVWKPEPCQICVCDSGSV
LCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAPTRPPNGHGPQGPKGDPGPPGIPGRN
GDPGLPGLPGSPGSPGPPGICESCPTGNQNYSPQYEAYDVKSGVTGGLPGYPGPPGPPGP
PGPPGASGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPLGPAGKDGESGRPGRPGE
RGLPGPPGVKGPAGMPGFPGMKGHRGFDGRNGEKGEQGAPGLKGENGLPGENGSPGAMGP
RGPAGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGSPGS
NGSPGQRGEPGPQGHAGAPGLPGPPGSNGSPGGKGEMGPAGIPGAPGLIGARGPPGPSGT
NGAPGQRGAAGEPGKNGAKGEPGSRGERGEAGSPGIPGLKGEDGKDGSPGEPGANGLPGA
AGERGMPGFRGPTGANGLPGEKGPPGERGGPGPAGPRGVAGEPGRDGLPGGPGLRGMPGS
PGGPGSDGKPGPPGSQGESGRPGPPGSPGSRGQPGVMGFPGPKGNDGAPGKNGERGSPGG
PGPQVCSFHPLISSLLVEAFLSNSMTSIIFISASITVFFFQGPAGKNGETGPQGPPGPTG
PGGDKGDTGPPGPQGLQGLPGTSGPPGENGKPGEPGPKGEAGAPGTPGGKGDSGAPGERG
LTGPPGPPGPRGGTGPPGSEGGKGAAGSPGPPGNAGSPGLQGMPGERGGPGGPGPKGDKG
EPGSSGVDGAPGKDGPRGPTGPIGPPGPAGQPGDKGESGAPGLPGIAGPRGGPGERGEHG
PPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGSAGPSGSPGPPGVKGERG
SPGGPGAAGFPGGRGLPGPPGNNGNPGPPGPSGPPGKDGPTGPAGSNGAPGSPGVSGPKG
DAGQPGEKGPPGSQGPPGVPGPLGVAGIAGARGLAGPPGMPGSRGSPGPQGLKGENGKPG
ASGLNGERGPPGAQGLPGLAGAAGEPGRDGNPGSDGLPGRDGSPGSKGDRGENGSPGPPG
APGHPGPPGPVGAAGKSGDRGETGPAGPSGAPGPVGSRGPPGPQGPRGDKGETGERGANG
IKGHRGFPGNPGSPGSPGPSGHQGAVGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPG
PRGNRGERGSEGSPGHPGQPGPPGPPGVPGPCCGGGVAAIAGIGGEKSGGFAPYYGDEPM
DYKINTDEIMTSLKSVNGQIESLLSPDGSRKNPARNCRDLKFCHPELKSGEYWVDPNQGC
KMDAIKVYCNMETGETCINASPLTIPRKNWWTNSAAEKKHVWFGESMDGGFQFSYGNPEL
PEDVLDVQLAFLRLLSSQASQNITYHCKNSIAYMDHASGNVKKALRLMGSNEGEFKAEGN
GKFTYSVLEDGCTKHTGEWGKTVFEYRTRKAVRLPIVDIAPFDIGGPDQEFGVDVGPVCF
L
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atggtgagctttgtgcaaaaggggacctggttacttttcgctctgcttcatcccactgtt
attctggcacaacaggaagttgttgaaggaggatgctcccatcttggtcagtcctacgcg
gatagagatgtctggaaaccagaaccatgccaaatatgcgtctgtgactcaggatctgtt
ctttgtgatgacataatatgtgatgaccaagaattagactgtcccaaccccgagatccca
tttggagaatgttgtgcagtttgcccacagcctccaacagctcccactcgccctcctaat
ggtcatggacctcaaggacccaaaggagatccaggtcctcctggtattcctgggagaaat
ggtgatcctggtcttccaggcctgccaggttcccctggttctcctggccctcctggaatc
tgtgaatcatgccctactggtaaccagaactattctccccagtatgaggcgtatgatgtc
aagtctggagtaacaggaggactcccaggctatcccgggccacctggtccacccggccca
cccggtccccctggtgcatccggtcatcctggttcccctggttctccaggataccaaggt
ccccctggtgaacctgggcaagctggtccttcaggtcctccaggacctcctggtgctata
ggtccattaggtcctgccggaaaggatggggaatcaggaagacccggacgacctggagag
cgaggattgcctggccctccaggtgtcaaaggtccagctggcatgcctggattccctggt
atgaaaggacatagaggctttgatggacgaaatggagaaaaaggcgaacaaggtgctcct
ggattaaagggtgaaaatggccttccaggtgaaaatggatctcctggagcgatgggtcca
agagggcctgctggtgagagaggacgaccaggacttcctggagctgcaggggctcgaggt
aatgatggagctcgaggaagtgatggacaaccaggtccccctggtccccctggaactgca
ggattccctggttcccctggtgctaagggtgaagttggacctgcgggatctcctggttca
aatggctcccctggacaaagaggagaacctggacctcagggacatgctggtgctccaggt
cttcctggccctcctgggagtaatggtagtcctggtggtaaaggtgaaatgggtcctgct
ggcattcctggggctcctggactgataggagcccgcggtcctccaggaccctctggtacc
aatggtgctcccgggcagcgaggtgctgcaggtgaacccggtaagaatggggccaaagga
gagccaggatcacgtggtgaacgcggggaagctggttctccaggcattccaggacttaag
ggtgaggatggcaaagacggttctcctggagaacctggtgcgaacggacttcccggagct
gcaggagaaaggggtatgcctggattccgaggacctactggagcaaatggccttccagga
gaaaagggtccccccggggagcgtggtggtccaggccctgcagggcccagaggagttgct
ggagaacctggccgagacggcctccctggaggtccaggattgaggggtatgcccggtagt
cctggaggaccaggcagcgatgggaaaccagggcctcccggaagtcaaggagaaagtggt
cgaccaggtcctccaggctcacctggttcccgaggtcagcctggtgtcatgggtttccct
ggtcctaaaggaaatgatggtgctcctggaaagaatggagaacgtggtagtcctggaggt
cctggccctcaggtatgtagctttcatccactcatttccagtcttctagtagaagcattt
ctctccaactctatgacttctattatctttatctctgcttccataactgttttttttttt
cagggtcctgctggaaagaatggtgagactggacctcagggtcccccaggacctaccgga
ccaggtggtgacaaaggagacacaggaccccctggtccacaaggattacaaggcttgcct
ggaacgagtggtcctccaggagaaaatggaaaacccggtgaacctggcccaaagggtgag
gctggtgcacctggaactccaggaggcaagggtgattctggtgcccccggtgaacgtgga
cttactggacctccagggccccctgggcctagagggggaactggcccccctggttccgaa
ggaggaaagggcgctgctggttcccctgggccacctggtaatgctggttcacctggtctg
caaggaatgcctggagaaagagggggtcctggaggccctggtccaaaaggtgacaagggt
gagcccggcagttcaggtgtcgatggtgctccagggaaagatggtccaaggggtcctact
ggtcctattggtccccctggcccagctggtcagcctggagataagggtgaaagtggtgcc
cctggacttccgggtatagctggtcctcgtggtggccctggtgagagaggtgaacatggg
ccaccaggacctgccggctttcctggtgctcctggccagaacggtgagcctggtggtaaa
ggtgaaagaggtgctcctggtgagaaaggtgaaggaggccctcctggagtcgcagggccc
cccggaagtgctgggccttccggttcccctggtcccccaggtgtcaaaggcgaacgtggc
agtcctggtggtcctggtgctgctggcttccctggtggtcgtggtcttcctggtcctcct
ggcaataatggtaacccaggccccccaggccccagtggtcctccaggcaaagatggcccc
acaggtccagctggtagtaatggtgctcctggcagccctggggtgtctggaccaaagggt
gatgctggccagccgggtgagaagggaccacctggctcccagggccctccgggagttcca
ggcccacttggagttgcagggattgctggagcacgaggtcttgcaggcccaccaggcatg
ccaggtagtaggggcagccccggcccacagggcctcaagggtgaaaatgggaaaccagga
gctagtggtctcaatggagaacgtggtcctcctggagcccagggtcttcctggtctggct
ggtgcagctggtgaacctggaagagatggaaaccctggatcagatggtctgccaggccga
gatggatctcctggtagcaagggtgaccgtggtgaaaatggctctcctggcccccctggt
gctcctggtcatccaggcccgcctggccctgtcggtgcagctggaaagagtggtgacaga
ggagaaactggccctgctggtccttctggtgccccaggtcctgttggttcaagaggtcct
cctggtccccaaggcccacgtggtgacaaaggtgaaacgggtgaacgtggtgctaatggc
atcaaaggacatcgcggattccctggtaacccaggttccccaggttccccgggtccctct
ggtcaccaaggtgcagtcggtagtccaggacctgcaggccccagaggacctgttggaccc
agtgggccccctggcaaagatggaacaagtggacaccctggtcccatcggaccaccaggg
cctcgaggtaacagaggcgaaagaggatctgagggctccccaggccacccaggacaacca
ggccctcctgggccccctggtgtccctggtccatgctgtggtggtggggttgctgccatc
gctggcattggaggtgaaaaatctgggggttttgccccatattatggagatgaaccaatg
gattacaaaatcaacaccgacgagattatgacttcactcaaatcagtcaatggacaaata
gaaagcctccttagtcctgatggttctcgtaaaaaccctgctcggaactgcagagacctg
aaattctgccatcctgaactcaagagtggagaatattgggttgatcctaaccaaggttgc
aagatggacgctattaaagtatactgtaacatggaaactggggaaacgtgcataaatgcc
agtcctttgactattccacgtaagaactggtggacaaattctgctgctgagaagaaacat
gtttggtttggagaatccatggatggtggttttcagtttagctatggcaatcctgaactt
cctgaagatgtcctcgatgtccagctggcattcctccgacttctctccagccaggcctcc
cagaacatcacatatcactgcaagaatagcattgcatacatggatcatgccagtgggaat
gtgaagaaagccttgaggctgatgggctcaaatgaaggtgaattcaaggctgaaggaaat
ggcaaattcacctactcagttctggaggatggttgcacgaaacacactggggaatggggc
aaaacagtcttcgaatatcgaacacgcaaggccgtcagactacctattgtagatattgca
cccttcgatattggtggtcctgatcaagaatttggtgtggacgttggccctgtttgcttt
ttataa
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