Balaenoptera musculus (blue whale): 118898305
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Entry
118898305 CDS
T09887
Symbol
PMS1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmus03400
]
118898305 (PMS1)
DNA repair and recombination proteins [BR:
bmus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
118898305 (PMS1)
BRITE hierarchy
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
118898305
NCBI-ProteinID:
XP_036714414
EnsemblRapid:
ENSBMSG00010008294
LinkDB
All DBs
Position
7:68586995..68678439
Genome browser
AA seq
932 aa
AA seq
DB search
MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEG
IKANDAPVMAMKYYTSKISSHEDLENLTTYGFRGEALGSICCVAEVLITTRTAADNFSTQ
YVLDGSGHIISQKPSHLGQGTTVTALRLFKNLPVRKQFYSTAKKCKEEIKKVQDLLINYG
ILKPDVRIVFVHNKAIIWQKTRVSDHKMALMSVLGTAVMGNMEPFQYHSEESQIYLSGFL
PKHDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLKID
VPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTYYGSLPRTNSYESNKTDVSSDDMVV
SKTTETDVLFTTMETSGNNYPNVDTSAIPFQNDVHNDKSGKNTNYCLNHQMHTGDHYDDH
FNSENSSIDKNSGNTFQEIPMNNLSCEDTQKEYSEICFVGSVKQAQSENGSKGHIDESGE
NEEEAVPEKSLEICVDDWSKGNALKDSRGENIEPVKILVPYESLACKVSNNNNNPSPEQK
NFSESSCNKKSNVVDNKSGQITAYDLISNRVIKKPMSASALFVQDHRAQFLTDNSKTSLE
DATVQIEELWKTLSEEEKLKYEEKATKDLERYNRQIKRAIGQESHVSLKDGKKWIKPTSA
WNLAQKHKLKTSLSNQPKLDELFQSQIEKKTQNIKKVQIPFSMENLKKNSDKHKKFDLEE
KDEVYLIHNLKFPDAWLITSKTEIMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIILTE
SLFNGSHYLEILHKMAADDQRYSGSTYLSDPRLTANGFKIKLIPGVSIAENYLEIEGMAN
CLPYYGVMDLKEIINAILNKNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDI
IYRMKHQFGNEIKGCFHGRPFFHHLTHLPEAT
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagctgccggcagcaacagttcgcctcctttcaagttctcaaataatcacttca
gtggtcagtgtcgtaaaagagctcattgaaaactccttggatgctggtgccacaagcata
gatgttaaactggagaactatggatttgataagattgaggtgcgagacaatggtgagggt
atcaaggctaatgatgcacctgtgatggcaatgaagtactatacctcaaaaataagtagc
catgaagatcttgaaaatttgacaacttacggttttcgtggagaagccttggggtcaatt
tgttgtgtagctgaggttttaattacaacaaggacagctgctgataattttagcacccag
tatgttttagatggcagtggccacataatttctcaaaaaccatcacatcttggtcaaggt
acaactgtaactgctttacgattgtttaagaatctacccgtaagaaagcaattttactca
actgctaaaaaatgtaaagaggaaataaaaaaggtccaagatctcctcataaactatggt
atacttaaacctgatgtaaggattgtttttgtacataacaaggcaattatttggcagaaa
actagagtatcagatcataaaatggctctcatgtctgttctggggactgctgttatgggc
aacatggaaccctttcagtaccactctgaagaatctcagatttatctaagtggatttctt
ccaaagcatgatgcagaccactctttcacaagtctttcaaccccagaaaggagtttcatc
tttataaacagtcgaccagtacaccaaaaagatatattaaagctaatccgacattattac
aatctgaaatgcctaaaggaatctactcgtttgtatcccattttctttctgaaaattgat
gttcctacagctgatgtagatgtgaatttaacaccagataaaagtcaagtattattacag
aataaggaatctgtgttgattgctcttgaaaatctgatgacaacttattatggatcacta
cctcgtacaaattcttacgaaagtaataaaacagatgtttcctcagatgacatggttgtt
agtaaaacaacagaaacagatgtgctttttactacgatggaaacatctggaaataattat
ccaaatgttgatacttcagccattcctttccagaatgatgtgcataatgataaatctggg
aaaaacactaattattgtttgaatcatcagatgcatactggtgaccattatgatgatcat
tttaatagtgaaaattctagcattgataagaacagtggaaatacatttcaggagatccca
atgaataatttatcatgtgaggacacccaaaaggaatatagtgaaatttgttttgtaggt
tctgttaagcaagcccaatcagaaaatggcagtaaaggccatatagatgagagtggggaa
aatgaggaagaagcagttcctgagaagtctttggaaatttgtgtagatgactggagcaag
ggaaatgcacttaaagattcaagaggagaaaacattgaacctgtgaaaattttagtgcct
tacgaaagtttagcatgtaaagtaagtaataataataataacccaagtcctgaacaaaag
aatttcagtgaaagttcctgtaacaaaaaatcaaatgtggtagataacaaatctggacag
attacagcttatgatttaattagcaatcgagtaatcaagaaacccatgtcagcaagcgcc
ctttttgttcaagatcatcgtgctcagtttctcacagacaattccaagaccagtttggaa
gatgcaacagtacaaattgaagaactgtggaagacattgagtgaagaggaaaaactgaaa
tatgaagagaaggctactaaagacttggaaagatacaataggcaaatcaagagagccatt
ggacaggagtcgcatgtatcattaaaagatggcaaaaaatggataaaacccaccagcgca
tggaatttggcacagaagcacaagttgaaaacttcattatctaatcagccaaaacttgat
gagctctttcagtcccaaattgaaaaaaaaacccaaaacattaaaaaagttcagatcccg
ttttctatggaaaacttaaaaaagaattctgataaacataagaaatttgacttagaagaa
aaggacgaagtttacttgatccacaatctcaagtttcctgatgcatggctaattacatcc
aaaacagagataatgttattaaatccatatagagtggaagaagctctgctatttaaaaga
cttcttgagaatcacaaacttcctgcagagccactcgaaaagccaattatattaacggag
agtctttttaatggatctcattatttagagattttacataaaatggcagcagatgaccaa
agatacagtggatcaacttacctgtccgatcctcgtctcacagcaaatggtttcaagata
aaattgataccaggagtttccattgctgaaaactacttggaaatagaaggaatggctaat
tgtcttccatactatggagtgatggatttaaaagaaattattaatgctatattaaacaaa
aatgcgaaggaagtttatgaatgtagacctcgcaaagtgataagttatttagagggagaa
gcagtgcgtctgtctagacagttacccatgtacttatcaaaagaggacatccaggatatt
atctacagaatgaagcaccaatttggaaatgaaattaaaggctgttttcatggtcgccca
ttttttcatcatttaacccatctcccagaagctacatga
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