Balaenoptera musculus (blue whale): 118898327
Help
Entry
118898327 CDS
T09887
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118898327 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmus03041
]
118898327 (SF3B1)
03036 Chromosome and associated proteins [BR:
bmus03036
]
118898327 (SF3B1)
Spliceosome [BR:
bmus03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
118898327 (SF3B1)
Complex B
118898327 (SF3B1)
Complex C
U2 SnRNP specific factors
118898327 (SF3B1)
Chromosome and associated proteins [BR:
bmus03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
118898327 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT_EF3_N
HEAT_ECM29
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
DUF2298
TALPID3
Motif
Other DBs
NCBI-GeneID:
118898327
NCBI-ProteinID:
XP_036714471
UniProt:
A0A8B8XY73
LinkDB
All DBs
Position
7:complement(75344163..75383316)
Genome browser
AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgcgaagacccacgaagatattgaagcacagattcgagaaattcaaggc
aagaaggcagctcttgatgaagctcaaggagtgggccttgattctacaggttattatgac
caggaaatttatggtggaagtgacagcaggtttgctggatacgtgacatctattgctgca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgcttggtcagaag
aagccaggatatcatgcccctgtggcattgcttaatgatataccacagtcaacagaacag
tatgatccatttgctgagcaccgacctccaaagattgcagatcgggaagatgaatacaaa
aagcacaggcggaccatgataatttccccagagcgtcttgatccttttgcagatggaggg
aagacccctgatcctaaaatgaatgctaggacttacatggatgtaatgcgagaacaacat
ttaactaaagaagagagagaaattaggcaacagctagcagaaaaagctaaagctggagag
ctaaaggtcgtcaacggagcagcagcatcccagcccccctcaaaacgaaagcggcgttgg
gatcaaacagctgatcagactcctggtgccactccaaaaaagctgtcaagttgggatcaa
gcagagacccctggacataccccttccttaagatgggatgagacaccaggtcgtgcaaaa
ggaagtgagactcctggagcaaccccaggctcaaaaatatgggatcctacacctagtcac
acacctgcgggagctgctacccctggacgaggcgatacaccaggccacgcgacaccaggt
catggaggcgcaacttccagtgctcgtaaaaacagatgggatgagacccccaaaacagaa
agagatactcctggacatggaagtggatgggctgagactcctcgaacagatcgaggtgga
gattccattggtgaaacaccaactcctggagccagtaaaagaaaatcacgttgggatgaa
acaccagctagtcagatgggtggaagcactcctgttctgacccctggaaagacaccaatt
ggcacgccagccatgaacatggctacccctactccaggtcacataatgagtatgactcct
gaacagcttcaggcttggcggtgggagagagaaattgatgagagaaatcgcccgttgtct
gatgaagaattagatgctatgttcccagaaggatataaggtacttccccctccagctgga
tatgttcctattcgaactccagctcgaaagctgacagcaactccaacacctttgggtggt
atgacaggtttccacatgcaaactgaagatagaactatgaaaagtgttaatgaccaacca
tctggaaatcttccatttttaaaacctgatgatattcagtactttgataaacttttggtt
gatgttgatgaatcaacacttagtccagaagagcaaaaagagagaaaaataatgaagttg
cttttaaaaattaagaatggaacacctccaatgagaaaagctgcattgcgtcagattact
gataaagctcgtgaatttggagctggtcctttgtttaatcagattcttcctctgctgatg
tcgcctacacttgaggatcaagagcgtcatttgcttgtaaaagttattgatagaatatta
tacaaacttgatgacttagttcgaccatatgtgcacaagatcctagtggtcattgaacca
ttgttgattgatgaggattactatgctagagtggaaggccgagagattatttctaatttg
gcaaaggctgctggtctggctactatgatctctaccatgagacctgatatagataacatg
gatgagtatgtccgtaacacaacagctagagcttttgctgtggtagcctctgccctgggc
attccttcattattgcctttcttaaaagctgtgtgcaaaagcaagaagtcctggcaagca
agacacactggtataaaaattgtacagcaaatagctattctcatgggctgtgccatcttg
ccacatctcagaagtttagttgaaatcattgaacatggtcttgtggatgagcagcagaaa
gttcggaccattagtgctttggccattgctgccttggctgaagcagcaactccttatggt
atcgaatcttttgattctgtgttaaagcctctatggaagggtatccgccaacacagagga
aagggtctggccgctttcttaaaggctattgggtatcttattcctctcatggatgcagaa
tatgccaactactatactagagaagtgatgttaattcttattcgagaattccaatctcct
gatgaagaaatgaagaaaattgtgctgaaggtggtaaagcagtgttgtggaacagatggt
gtagaagcaaactacattaaaacagagatccttcctcctttttttaaacatttctggcaa
cacagaatggctttggatagaagaaattaccggcagttagttgatactactgtggagttg
gcaaacaaagtaggtgcagcagaaattatatccaggattgtggatgatctgaaagatgaa
gctgaacagtacagaaaaatggtgatggagacaattgagaaaattatgggcaacttggga
gcagcagatattgatcataaacttgaagaacaactgattgatggtattctttatgctttt
caagaacagactacagaggactcagtaatgttgaacggctttggcacagtggtcaatgct
cttggcaaacgagtcaaaccgtacttgcctcagatctgcggtacagttttgtggcgttta
aataacaaatcagcaaaagttaggcaacaggcagctgacttgatctctcgaacggctgtt
gtcatgaagacttgtcaagaggaaaaattgatggggcacttgggtgttgttttgtatgag
tatttgggcgaagagtaccctgaagtattgggcagcattcttggagcactgaaggccatt
gtaaatgtaataggtatgcataagatgactccaccaattaaagatctgctgcctagactc
acccccatcttaaagaataggcatgaaaaagtacaagagaattgtattgatcttgttgga
cgtattgctgataggggagctgaatatgtgtctgcaagagaatggatgaggatttgcttt
gagcttttagagctcttaaaagctcacaaaaaagctattcgtagagccacagtcaacaca
tttggttatattgcaaaggccattggccctcatgatgtattggctacacttttaaacaac
ctcaaagttcaggaaaggcagaacagagtttgtaccactgtagcaatagctattgttgct
gaaacatgttcacccttcacagtactacctgccttaatgaatgaatacagagttcctgaa
ctgaatgttcaaaatggagtgttaaaatcactttccttcttgtttgaatatattggtgaa
atgggaaaggactacatttatgctgtaacaccactccttgaagatgctttaatggatagg
gaccttgtacacagacagacggctagtgcagtggtgcaacacatgtcacttggggtttat
ggatttggttgtgaagattcactgaatcacttgttgaactatgtatggcccaatgtgttt
gagacatctccccatgtaattcaggcagttatgggggccctggagggtctgagagttgct
attggaccatgtagaatgctgcagtattgtttacagggtttgtttcacccagcccggaaa
gtcagagatgtgtattggaaaatttacaactccatctacattggttcacaggatgcgctc
atagcacattacccaagaatctacaatgatgataagaacacctatattcgttatgaactt
gactatatcttgtaa
DBGET
integrated database retrieval system
