Balaenoptera musculus (blue whale): 118898352
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Entry
118898352 CDS
T09887
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118898352 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmus03041
]
118898352 (PRPF40A)
Spliceosome [BR:
bmus03041
]
Complex A
U1 snRNP components
U1 related factors
118898352 (PRPF40A)
Complex B
118898352 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
118898352
NCBI-ProteinID:
XP_036714527
UniProt:
A0A8B8XX53
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All DBs
Position
7:complement(35993248..36049692)
Genome browser
AA seq
1039 aa
AA seq
DB search
MQATPSEAEAGGESPKSCVSAAQSDWTAGKPVSLLAPLIPPRRAGQPLTFSPSGRQPLRS
LLVGMCSGSGRRRSSLSPTMRPGTGAERGGLMVSEMESHPPSRGPGDGERRLSGSSLCSS
SWVSADGFLRRRPSMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTTSGAKSMWTEHKSPDGRTYYYNT
ETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGY
QNTIVAGSLITKSNLHAMIKAEESSKQEECTTSTAPVPTTEIPTTMSTMAAAEAAAAVVA
AAAAAAAAAAAANASASTSASSTVGGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQL
TSTPAVQDQSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKE
LLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKE
AKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQ
AKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFE
EHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISS
DIRFTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFED
FVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAT
PPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKS
KKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKK
RRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELS
EGELEKRRRTLLEQLDDDQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccgagtgaggctgaggctgggggcgaatcgccgaagagctgcgtgtcg
gcagcgcagtctgattggacagcggggaagcctgtcagcttattggccccgctgatcccg
ccccgtagggcagggcagcctttaacctttagccccagtgggcgccagccactcagatcg
cttcttgttggtatgtgtagcggcagtggccgccggcggagcagtctgagtccgacgatg
aggccggggacgggagccgagcgtggaggcctcatggtgagtgaaatggagagccatcct
ccctcgcggggtcccggggacggggagcggagattgtccggctcaagcctctgctccagc
tcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcaccctggcatg
cattatgccccaatgggaatgcatcctatgggtcagagagcgaatatgcctcctgtacct
catggaatgatgccgcaaatgatgcccccaatgggaggaccaccaatgggacaaatgcct
ggaatgatgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatg
cagcctgccttaccgccaggagtaaataatatggatgtagcagcaggtacaacatccggt
gcaaaatcaatgtggactgaacataaatcacctgatggaaggacctactactataatact
gaaacaaaacagtctacttgggagaaaccagatgatcttaaaactcctgctgagcaactt
ttatctaaatgcccttggaaggagtacaaatctgactctggaaagccttactattacaat
tctcaaacaaaagaatcccgctgggcgaaacctaaagaacttgaagatcttgaaggatac
cagaataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaa
gctgaagaaagcagtaaacaagaagagtgcaccacatcaacagccccagttcctacaaca
gaaattccaaccacaatgagcaccatggctgctgcagaagcagcagctgctgttgttgca
gcagcagctgcagcagcagctgctgcagctgcagccaatgcaagtgcttccacctctgct
tctagtactgtcggtggaactgttccagttgttcctgagcctgaggttacttcgattgtt
gctactgttgtagataatgaaaatacagtaacaatttcgactgaagaacaagcacaactt
actagtacccctgctgttcaggatcaaagtgttgaagtgtctagtaatactggagaagaa
acgtctaagcaggaaactgtagctgattttactcccaaaaaggaggaggaagaaagccaa
ccagcaaaaaaaacatatacttggaatacaaaggaggaagcaaagcaagcatttaaagaa
ttattgaaggaaaagcgggtaccatctaatgcttcatgggagcaagctatgaaaatgatc
attaatgatccacgatacagtgctttagcaaagttgagtgaaaaaaagcaggcctttaat
gcttataaagtccagacagagaaagaagaaaaagaagaagcaagatccaaatacaaagag
gctaaggaatcctttcagcgttttcttgaaaatcatgaaaaaatgacttccacaactaga
tacaaaaaagcagagcaaatgtttggagagatggaagtctggaatgcaatatcagaacgt
gatcgtcttgaaatctatgaagatgttttattctttctttcaaaaaaagaaaaggagcaa
gcaaagcagttgcgaaagagaaattgggaagccttaaaaaacatacttgacaacatggct
aacgtgacatactctactacttggtctgaagcccagcagtatctgatggataatccaact
tttgcagaagatgaagaattacagaacatggataaagaagatgcgttaatttgctttgaa
gaacacattcgggctttagaaaaggaagaagaagaagaaaaacagaagagtttgcttcgg
gaaaggagacgacagcgtaaaaaccgagaatcttttcagatatttttagatgaactgcat
gaacatggacaactgcattctatgtcatcttggatggaattgtatccaacaattagttcc
gacattagattcactaatatgcttggtcagccggttttttcattaggatcaactgcactt
gaccttttcaagttttatgttgaggatcttaaagcacgttatcatgatgagaagaagata
ataaaagacattctaaaggataaaggatttgtagttgaagtaaatactacttttgaagac
tttgtggcaataatcagttcgactaaaagatcaaccacattagatgcaggaaatattaag
ttggctttcaatagtttactagaaaaggcagaagcccgtgaacgtgaaagagaaaaagag
gaggctcggaagatgaaacgaaaagaatctgcatttaagagtatgttgaaacaagctact
cctccaatagaattggatgctgtctgggaagatatccgggagagatttgtaaaagagcca
gcatttgaggatataactctagagtctgaaagaaaacgaatatttaaagattttatgcat
gtgcttgagcatgaatgtcaacatcatcattcaaagaataagaaacactctaagaaatct
aaaaaacaccacaggaaacgctcccgctctcgatcagggtcagattcagatgatgatgac
agccattcaaagaaaaaaagacagcgatcagagtctcgttctgcttcagaacattcttct
agtgctgaatctgagagaagttataagaaatcaaaaaaacacaagaagaaaagcaagaag
agaagacataaatctgactctccagagtcagatgctgaacgggagaaggataaaaaagaa
aaagaccgggaaagcgaaaaagacagaactagacaaagatcagagtcaaaacacaaatca
cctaagaaaaagactggaaaggattctggtaattgggatacttctggcagtgaactgagt
gaaggggaattggaaaagcgtagaaggacccttttggagcaactggatgatgatcaataa
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