Balaenoptera musculus (blue whale): 118901639
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Entry
118901639 CDS
T09887
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03082
ATP-dependent chromatin remodeling
bmus04714
Thermogenesis
bmus05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118901639 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
118901639 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
118901639 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmus03021
]
118901639 (SMARCC2)
03036 Chromosome and associated proteins [BR:
bmus03036
]
118901639 (SMARCC2)
Transcription machinery [BR:
bmus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118901639 (SMARCC2)
Chromosome and associated proteins [BR:
bmus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118901639 (SMARCC2)
PBAF complex
118901639 (SMARCC2)
GBAF(ncBAF) complex
118901639 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
118901639
NCBI-ProteinID:
XP_036720854
UniProt:
A0A8C0CWT1
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All DBs
Position
10:complement(44766665..44786737)
Genome browser
AA seq
1243 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEEKKEPKEPREGVGATEEEAKEKTSEAPKKDDEKGKDGDSEKE
SEKSDGDPIVDPEKEKEPKEGQEEVLKEVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQPPPQALPPGSQPVPPAGAAGPPAVHGLALA
PASVAPASAGSGAPPGSLGPSEQIGQAGSTAVPQQQQAAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPSMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPAPSIIPFGSLADSISINLP
PPPNLHGHHHHLPFAPATLPAPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQSP
AIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPTQ
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctctggctcggcaagaactacaagaagtatatacaa
gctgaaccacctaccaacaagtccctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaac
gtggaaatgttcatgaccattgagaaatccttggtgcagaataattgcctgtctcgacct
aacatttttctgtgcccagaaattgaacccaaactgctagggaaattaaaagacattatc
aagagacatcagggaacggtcactgaggataagaacaatgcctcccatgtcgtgtatcct
gtcccagggaacctggaggaagaggaatgggtacggccagtcatgaagagggataagcag
gttcttctgcactggggctactatcctgacagttacgacacatggatcccagccagtgaa
attgaagcatctgtggaagatgccccgactcctgagaaacctaggaaggttcatgcaaag
tggatcctggacacagacaccttcaatgaatggatgaatgaggaagactatgaagtaaat
gatgacaaaaaccctgtctcccggcgaaagaagatttcagccaagacactgacggatgag
gtgaacagcccagattcggatcgacgggacaagaaggggggcaactataagaagaggaag
cgctccccatccccttcaccgaccccagaagctaagaagaagaatgctaagaaaggtccc
tcaacaccttacaccaagtcaaagcgtggccacagagaagaggagcaagaagacctgaca
aaggacatggatgagccctcaccggtccccaatgtggaagaggtgacattgcccaagaca
gtcaatactaagaaggactcggagtcagccccggtcaaaggaggcaccatgactgacctg
gatgaacaagaagatgaaagcatggagaccacgggcaaggatgaggatgagaacagcacg
gggaacaagggggagcagaccaagaatccggacctgcatgaggacaacgtgaccgaacag
acccatcacatcatcatcccaagctatgctgcctggtttgactataatagtgttcacgcc
atagagcggagggctctccctgagttcttcaatggcaagaacaagtccaagactccagaa
atctacctggcctatcgaaacttcatgatcgacacttaccggctgaacccccaagagtat
ctcacgtccaccgcctgccgcaggaacctggcgggtgatgtctgtgccatcatgagagtc
catgccttcctagaacagtggggtcttattaactaccaggtggatgctgagagtcgacca
acaccaatggggcctccgcccacctcgcatttccacgtcttggcggacacaccgtctggg
ctggtgcctctgcagcccaagaccccgcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacttggtgccagagacggctaagggcaagccagag
ctgcagacctctgcttcccagcaaatgctcaacttccctgataaaggcaaggagaaaccg
acagacatgcagaactttgggctgcgcacagacatgtacacaaagaagaacgtcccctcc
aagagcaaagctgcggccagtgccactcgagagtggacagaacaggagaccctgctactc
ctggaggcactggaaatgtacaaagatgactggaacaaagtatcggagcacgtgggaagc
cgcacacaggacgaatgcatcttgcattttcttcggcttcccattgaagacccgtacctg
gaggactcagaggcctccctgggccccctggcctaccagcccatccccttcagccagtca
ggcaaccctgtgatgagcaccgttgccttcctggcctctgtcgtcgaccctcgagtggcc
tctgctgctgcgaagtcagccctagaagagttctccaaaatgaaggaagaggtacccaca
gccttggtggaggcccacgttcggaaagtggaagaagcagccaaagtgacaggcaaagca
gacccagcctttggtctggaaagcagtggcattgcaggaaccacctctgatgaacctgag
cggattgaggagagcgggactgacgaggcgcgggcggagggccaggccacagaggagaag
aaggagcccaaggaaccacgagaaggagttggggctacagaggaagaagcaaaggagaag
accagtgaggcgcccaagaaggatgacgagaaagggaaagacggcgacagcgagaaggag
tcagagaagagtgacggggacccgatagttgatcctgagaaggagaaggagcccaaggaa
gggcaggaggaagtgctgaaggaagtggtggagtcggagggggaaaggaagacgaaggtg
gagcgtgacatcggcgagggcaacctctccaccgctgcggccgctgccctggctgccgct
gccgtgaaggccaagcacttggctgccgttgaggagaggaagatcaaatctctggtggcc
ctgctggtggagacccagatgaaaaagttggaaatcaaactccggcactttgaggagcta
gagacgatcatggaccgggagcgagaagcgctagagtatcagaggcagcagctcctggcc
gacagacaagccttccacatggagcagctgaagtacgcggagatgagggcccggcagcag
cacttccagcaaatgcaccaacagcagcagccgcccccgcaagccctgccccctggctcc
cagcctgtcccacctgcgggcgctgctgggccacccgctgtccacggcttggctctggct
ccagcctccgtggcccctgcctctgcgggcagtggggcccctcccggaagcttgggcccc
tctgaacagattgggcaggcagggtcaactgcagtgccacagcagcaacaagcagctgga
gccccccagcctggggcagtcccaccaggggtacccccccctggaccccacggcccctca
ccgttccccaaccaacaaactcctccctcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccgcctcccccc
cctgctccatccatcatcccatttggtagcctagccgactccatcagtattaacctcccc
cctcctcctaacctgcatgggcatcaccaccatctcccgttcgccccggccactctcccc
gcccctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcgaccacc
accatgccatcttctttgcctcttgggccggggctcggatccgccgcagcccagagccct
gccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgccagaccca
ggcacccccctgcctccagaccccacggccccgagcccaggcacagtcacccctgtgccg
cccacacagtga
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integrated database retrieval system
