Balaenoptera musculus (blue whale): 118901796
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Entry
118901796 CDS
T09887
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03082
ATP-dependent chromatin remodeling
bmus04714
Thermogenesis
bmus05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118901796 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
118901796 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
118901796 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmus03021
]
118901796 (SMARCD1)
03036 Chromosome and associated proteins [BR:
bmus03036
]
118901796 (SMARCD1)
Transcription machinery [BR:
bmus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118901796 (SMARCD1)
Chromosome and associated proteins [BR:
bmus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118901796 (SMARCD1)
PBAF complex
118901796 (SMARCD1)
GBAF(ncBAF) complex
118901796 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
118901796
NCBI-ProteinID:
XP_036721296
UniProt:
A0A8B8YIQ9
LinkDB
All DBs
Position
10:40330934..40342596
Genome browser
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGASGGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGMDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIATL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggcgggtttccagtctgtggctccgagcggcggcgccggagcctcagga
ggggcgggcgcggcggctgctctgggtccgggcgggactccggggcctccggtgcgaatg
ggcccggcgccgggtcaagggctgtaccgctccccgatgcccggagcggcctatccgaga
ccaggtatgctaccaggcagccgaatgacacctcagggaccttccatgggaccccctggc
tatggggggaacccttcagtccgacctggcctggcccagtcagggatggaccagtcccgc
aagagacctgcgcctcagcagatccagcaggtccagcagcaggcggtccaaaatcggaac
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgaactg
gtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggaccagact
atcatgaggaaacggctagatatccaggaggccttgaaacgtcccatcaagcaaaaacgg
aagctgcgaattttcatttctaacactttcaatccggctaagtcagatgccgaggatggg
gaagggacggtggcttcctgggagcttcgggtagaaggacggctcctggaggattcagcc
ttgtccaaatatgatgccaccaaacaaaagaggaagttctcttctttttttaagtccttg
gtgatcgaactggacaaagacctgtatgggccagataaccatctggtggaatggcacagg
accgccactacccaggagacagatggcttccaggtgaagcggccaggagacgtgaatgta
cggtgtactgtcctgctgatgctggattaccagcctcctcagtttaaactagaccctcgt
ctggctcggctgctgggcatccacacccagacccgtccagtgatcattcaagcactgtgg
caatatattaagacgcataagctccaggacccacatgagcgggagtttgtcatctgtgac
aagtacctccagcagatctttgagtctcaacgtatgaagttttcagagatcccccaacgg
ctccacgccttgcttatgccaccagagcccatcatcattaatcatgtcatcagtgttgac
ccgaatgatcagaaaaagacagcttgttatgacattgatgtggaagtggatgataccttg
aagacccagatgaattcttttctgctgtctactgccagccagcaggagattgctactcta
gacaacaagatccatgagacaatagaaactatcaatcagctgaagacccagcgagagttc
atgctgagctttgccagagaccctcagggtttcatcaatgactggcttcagtcccagtgc
cgggacctcaagaccatgactgatgtggtgggtaacccagaggaagagcgccgagctgag
ttctacttccagccttgggcacaggaggccgtgtgccgatacttctactccaaggtgcag
cagagacgacaagaattagagcaagccctgggaatccgaaatacatag
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