Balaenoptera musculus (blue whale): 118902171
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Entry
118902171 CDS
T09887
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04151
PI3K-Akt signaling pathway
bmus04510
Focal adhesion
bmus04512
ECM-receptor interaction
bmus04518
Integrin signaling
bmus05165
Human papillomavirus infection
bmus05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118902171 (TNR)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118902171 (TNR)
04518 Integrin signaling
118902171 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118902171 (TNR)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
118902171 (TNR)
09172 Infectious disease: viral
05165 Human papillomavirus infection
118902171 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bmus00536
]
118902171 (TNR)
Glycosaminoglycan binding proteins [BR:
bmus00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
118902171 (TNR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_PBP1
EGF_2
Pur_ac_phosph_N
Fn3_VIN3
FN3_Tor_3rd
SPE9_EGF_3rd
DUF7949
Motif
Other DBs
NCBI-GeneID:
118902171
NCBI-ProteinID:
XP_036722129
UniProt:
A0A8C0C9B4
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All DBs
Position
1:complement(130707661..131124866)
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AA seq
1358 aa
AA seq
DB search
MGADGETVVLKNMLIGVNLILLGSMLKPSECQLEVTTERVQRQAVEEEGGAASYNTSGKE
QPVVFNHVYNINVPLDSLCSSGLEASAEQEVSAEDEVLTEYMGQTSDHESQVTFTHRINL
PRKACPCASSAQVLQELLSRIEMLEREVSVLRDQCTSNCCQESAATGQLDYIPHCSGHGN
FSLESCGCICDQGWFGKNCSEPYCPLGCSSRGVCVDGQCICDSEYSGDDCSELRCPTDCS
SRGLCVDGECICEEAYTGEDCSELRCPGDCSGKGRCTNGTCLCQEGYTGEDCGQQRCLNA
CSGRGHCQEGLCFCEEGYQGPDCSAVAPPENLRVAGISDRSIELEWDGPMAVTEYVISYQ
PTALGGLQLQQRVPGDWSGVTISELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQG
LQFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
TVNVVALKEQARSPPTSASVSTVIDGPTHILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGGKTTFRLQPPLSQYSVQALRPGSQYEVWVSAVRGTNESESTTTQFTTEIDAPKNL
RRGSRTATSLDLEWDNSEAEVQEYKIVYSTLAGEQYHELLVPKGIGPTTRATLTDLVPGT
EYGIGISAIMNSQQSVPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF
TPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSLESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEETMEVSLDATKRHAVLMGLQPATEY
IVNLVAVHGTVTSEPIMGSITTGIDPPKDITISNVTKDSVMVSWSPPVASFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTITKLYPATEYEISLNSVRGREESERICTLVHTAMDNPVDLT
ATNITPTEALLKWKAPVSEVENYVIVLTHFAVAGETILVDGDSEEFQLVDLLPRTHYTAT
MYAASGPLTSGTISTNFSTLLDAPANLTASEVTRQSALISWQPPRAETENYILTYKSTDG
SRKELIVDAEDTWIRLEGLSESTDYTVLLQAAQDTERSSITSTAFTTGGRVFPHPQDCAQ
HLMNGDTLSGVYTIFLNGELSRKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWAEYRVG
FGNLEDEFWLGLDNIHWITSQGRYELRVDMRDGQDAAFAYYDKFSVEGSRSLYKLRIGGY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYSHRLMAGRKRRSLQF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggggcagacggggaaacagtggtcttgaagaacatgctcattggcgtcaacctgatc
cttctgggctccatgctcaagccctcagagtgtcagctggaggtcaccacggaaagggtc
cagagacaggcggtggaggaggaaggaggtgctgccagctacaatacatccggcaaagag
cagccggtggtcttcaaccacgtgtacaacattaacgtgcccctggacagcctctgctcc
tcggggctggaggcctcggccgagcaggaggtgagtgccgaagacgaggtgctgacagag
tacatgggccagacctcggaccacgagagccaggtcaccttcactcacaggatcaacctc
cccagaaaggcctgcccatgcgccagctctgcccaggtgctgcaggagctgctgagccga
atcgagatgctggagagggaggtgtcagtgcttcgggaccagtgcaccagcaactgctgc
caggaaagtgcggccacaggacaactggattatatccctcactgcagtggccacggcaac
tttagcctcgagtcctgtggctgcatctgcgatcaaggctggtttggcaagaactgctcg
gagccctactgccccctaggctgctccagtcggggcgtgtgtgtggatggccagtgcatc
tgtgacagcgagtacagcggtgacgactgctcggagctccggtgcccgacagactgcagc
tcccgggggctgtgcgtggacggggagtgtatctgcgaagaggcctacactggcgaggac
tgcagcgagctgaggtgccctggggactgctcggggaaggggagatgtaccaacggtacc
tgcctgtgccaggagggctacactggtgaggactgcggccagcagcggtgtctgaacgcc
tgcagtgggcgaggacactgccaggaggggctctgcttctgtgaagagggctaccagggc
cctgactgctcggcagttgcccctccagagaacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacgggccgatggcagtgacggaatatgtgatctcttaccag
ccgacggccctggggggcctccagctccagcagcgggtgcctggagattggagtggtgtc
accatctcagagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatcctcagccttcccatcacggccaaggtggccacccatctctccactcctcaaggg
ctacaattcaagacgatcacagagaccaccgtggaggtgcagtgggagcccttctcattc
tccttcgatgggtgggagatcagcttcattccaaagaacaatgaaggaggggtgattgcc
cagctccccagtgacgttacatccttcaaccagacgggattaaagcctggggaagaatat
actgtcaatgtggtggccctgaaagagcaagcccggagcccccctacctcggccagcgtc
tccactgtcattgatgggcccacgcacatcctggttcgagatgtctccgacactgtagcc
ttcgtggagtggaccccacctcgagccaaagtcgatttcattctcttgaagtacggcttg
gtgggcggggaaggcgggaagaccaccttccgactgcagcctcccctgagccagtactcg
gtacaggccctgcggcccggctcccaatacgaggtgtgggtcagcgcagtccgtgggacc
aacgagagtgagtccaccaccacccagttcacaacagagattgacgcccccaagaacctg
cggcgtggttcccgcacagcaaccagccttgaccttgagtgggacaatagtgaagcagag
gttcaggagtacaagattgtgtacagcaccttggcgggcgagcagtaccatgagctgttg
gtccccaagggcatcggtccaaccaccagagccacgctcacagatctagtgcctggcact
gagtatggaattggaatatccgccatcatgaactcacagcaaagcgtaccagccaccatg
aatgccaggactgaacttgacagtcctcgagacctcatggtgacagcctcctcagaaacc
tccatctccctcatctggaccaaggccagtggccccattgaccactaccgaattacattc
accccatcctctgggatcgcctctgaagtcactgtgcccaaggacaggacctcgtacaca
ctgacagatctagagcccggcgcagagtacatcatttcaatcacagctgagaggggtcgg
cagcagagcttggagtctacggtggatgccttcacaggcttccgccccatctcccatttg
cacttttctcacgtgacctcctccagtgtgaacatcacctggagtgacccatcccctcca
gcagacagactcattctgaactacagcccccgggatgaagaggaagagacgatggaggtc
tctctggatgccaccaagaggcatgctgtcctgatgggcctgcagccagccaccgagtac
atcgtgaacttggtggcagtccatggcacagtgacctctgagcccatcatgggctccatc
accacaggaattgatccccccaaagacatcacaatcagcaatgtgaccaaggactcagtt
atggtctcctggagccctcctgttgcatcttttgattactaccgagtatcatatcggcca
acacaagtgggacgactggacagctcagtggtgcccaacacagtgacagaattcaccatc
accaagctgtacccagctaccgaatatgaaatcagcctcaacagcgtgcggggcagggaa
gagagtgagcggatctgcactcttgtgcacacagccatggacaatcctgtggatctgact
gctaccaacatcactccaacagaagctctgctgaagtggaaggcaccagtgagtgaagtg
gagaactacgtcattgttctcacacactttgcagttgctggagagaccatcctggttgat
ggagacagtgaggaattccagcttgttgacctgcttcctaggacccactataccgccact
atgtatgccgccagtgggcctctcaccagtggcaccatcagcaccaacttctctaccctc
ctggacgctcctgcaaatctgacagcaagtgaagtcaccagacaaagtgccctgatctcc
tggcagcctcccagagcagagactgagaattacatcttgacctacaaatccactgacgga
agccgcaaggagctgattgtggacgcggaggacacgtggatccgactggagggcctgtcc
gagagcacagactacacggtgctcctgcaggcggcccaggacactgagcggagcagcatc
acctccaccgccttcaccacagggggccgggtcttccctcatcctcaagactgtgcccag
catttgatgaacggagacactctgagcggggtttacaccatcttcctcaatggagagcta
agccggaagttacaggtgtactgcgatatgacgaccgacgggggtggctggattgtattc
cagaggcggcagaatggccaaactgattttttccggaaatgggctgagtaccgcgttggc
ttcgggaacctggaggatgagttttggctggggctggacaacatacactggatcacgtcc
cagggccgctacgagctgcgcgtggacatgcgtgacggccaggacgccgccttcgcctac
tatgacaagttctctgtcgagggcagcagaagcctgtacaaactccgcataggaggctac
aacggcaccgcaggggactccctcagctatcatcagggccgccctttctccacagaggac
agagacaatgatgttgcagttaccaactgtgccatgtcatacaagggggcttggtggtat
aagaactgccaccggaccaacctcaatgggaaatacggggagtccaggcacagccagggg
atcaactggtaccactggaaaggccacgagttctccatccccttcgtggaaatgaagatg
cgcccctacagccaccgtctcatggcggggaggaaacggcggtccttgcagttctaa
DBGET
integrated database retrieval system