KEGG   Balaenoptera musculus (blue whale): 118903622
Entry
118903622         CDS       T09887                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
bmus  Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:bmus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bmus03400]
    118903622 (MDC1)
DNA repair and recombination proteins [BR:bmus03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    118903622 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 118903622
NCBI-ProteinID: XP_036724753
UniProt: A0A8B8YQK7
LinkDB
Position
11:complement(23052964..23067831)
AA seq 1908 aa
MEDTQVINWEVEEEEEVEERPSESLGCSSEPLGRLRIFSSSYGPEKDFPLYLGKNVVGRM
PDCSVALPYSSISKQHAVIEILAWDKAPVLRDCGSLNGTQILRPPKVLGPGVSHRLRDRE
LILFADLPCQYHRLDVPLSFVSRGPLTVEETPRVQGGTQPHRLLLAEDSEEEVDSLSEKC
VVKGPRTSFLATVVPESDEEGPSSALDGPGPPFAFNLNSDTDEEESQQPGAGEASSAARR
VTAAETEQPKPVTTEIQLEKDQCSVKEKNNDTKVERNARSGVVPVGVILERSQPAGEDSD
TDVDDESGPLRRLTGVHLERAQPCGFIDSDTDVEEEGIPATPAVVPVRKRHILHEVGTES
PRAPGMAHRQESPAGSDTDIEEREAPLTVPLDRSRASVVIDSNTDDKEEVSAALTLAHLR
ESRAVAWNRDADAEEDRAQPVALLEQSQASAGRDSDTDVKEKGLPVEKTGTVPRGHTGKA
YSEKSQPPLRDSDTEVMEEKSSLGFHLQRSQASATVHVNTQVVEEVPPGPAVILLEKHQV
PVAWTHQTDVEAEGGPAKLPVVYLEEAQPPLAGDCGPDAEENTSLAASAVADVRKSQLHA
EEDTGTEWAAAVLEQGRAFMAGAQGGSPAAQVEQDLLPVSRNNIAHLVVDTGTPGEPTQP
QREGAQTPTEREREPHVDRTMNSGDNHDDSEDLDLQATQCFVERENQSLEVPSMEDEPTQ
AFLFTLPQEPGPSRCSFQATGSLDEPWEVLATQPFCPRESEASETQPIATHIEAHGPCPS
PPTAAPQEQHPESPVHAQSLGIQGRGMQTVEEDMGTPRETAERVTPERGPLERETEKLPS
EGEREDVMGEEESTRGIQDREQKQVLARDTQKQESDKRVKSASTERDMESLKVEIETPKE
IQEKEREKQTLTREIFDREAEKPVAERECEAGGLEGKVPKVMLDRGPQTGETEAGGQDQK
GQASGSTPEPGAGAGDLQGLASDPIASGSQSGGGRGAPVRPRRQQRGYLNCKMPPAEKAS
RGDQESPAACRPPAVQEASAPLQNPLISQSPKRPAPQSLLSSSSPPSEPPIPRTRQNESQ
EALETPFSSELDALHPKPKVKPQGSSPVSSVPLEPHPTTSTDQPVTPKPTSRATRGRTLR
SSVKTPERNVSTAPELQPSAHTDQPVTPKPTSRATRGRTQRASVKTPEPVISTAPEPQPC
TSTDQPVTPKPTSRATRGRALRSSVKTPERNVPTAPELQNSAHIDQPVTPKPTSRATQGR
ALRSSVKTPERNVSTAPELQNSAHTDQPVTPKPTSRATRGRALRSSVKTPEQNVPTAPEL
QPSAHTDQPVTPKPTSRGRTQRASVKTPEPVISTAPEPQPSTSTDQPVTPKPTSRATRGR
TLRASVKTPERNVSTAPELQPSAHTDQPVTPKPTSQAPRGRTLRSSAKTPEPVVPITPEP
QPSTSKDQSLTPEPTSQATRGRTHRSSVKTSQPTEPTAPDLEPSSPTDQPVTPKVIAQGG
QSRTLRSSTVSAVPVPTTPEFHSPVPTEQPIPPEPIPEANCSRRPRATRKPGSLTAHVHE
PYSAPSEPNSRSSRNQRRGAVRAAESLSTIPEPAFAQLPEAPTHAPQIPKGEAADRSGFT
PEPQPEASQNHKRPLATVDSPPLQKRLQRGEVPQKTAFLKEEENPAAKLRKIEDVVIPGP
GKRKREQTEEEPREIPSRSLRRTKPIQESTAPKVLFTGVVDAHGERAVLALGGSMASSVA
EASHLVTDRIRRTVKFLCALGRGIPILSLDWLHQSRKAGCFLPPAEYVVTDPEQEKNFGF
SLREALSRARERRLLEGYEIHVTPGVQPPPPQMGEIISCCGGTVLPSMPRSYKPQRVVIT
CSQDFPRCAIPFRVGLPILSPEFLLTGVLSREAKPEAFVLSTLEMSST
NT seq 5727 nt   +upstreamnt  +downstreamnt
atggaagacacccaggttattaactgggaagttgaagaagaggaggaggttgaagagaga
cccagtgaatctttggggtgtagctcggagccccttgggcgactgcgtatcttcagtagt
tcctatggaccagaaaaagatttcccattataccttgggaagaatgtggtaggccgaatg
cctgattgctctgtggccctgccctattcatctatctccaaacaacacgcggtgattgaa
atcttggcctgggacaaggcacctgtcctccgggattgtgggagcctcaatggtactcaa
atcctgaggcctcctaaggtcctgggccctggggtgagtcatcgtttgagggaccgggag
ttgattctctttgctgacttgccctgccagtaccatcgcttggatgtccccctgtccttt
gtctcccggggccctctaactgtagaggagacacccagggtacagggaggaactcaaccc
cacaggcttctgttggctgaggactcagaggaagaagtagattctctttctgaaaagtgt
gtggtgaaaggaccaaggacctcctttttggcaacagtagttccagagagcgatgaggag
ggaccttcgtctgccctggatggccctgggccaccttttgccttcaacttgaacagtgac
acagatgaggaagaaagtcagcaaccaggagcaggggaggcctcctcagctgccagaaga
gtcactgctgcagagacagaacagcctaaacctgtcacaactgaaatccagcttgaaaag
gatcagtgttcagtgaaggagaagaacaatgacacgaaagttgagaggaatgcgaggagt
ggggtggttccagttggagtgattctggagaggagccagcctgctggggaggacagtgac
acagacgtggatgatgaaagcgggcctctgagaaggctcactggggtccatctggaaagg
gcccagccttgtggcttcatagacagtgatactgatgtggaagaagaggggatccctgcg
accccagcagtagttcctgtgaggaagaggcacatcttgcatgaagttggtacagagagt
cctcgggcacctggcatggcacatcggcaggagagcccggctggtagtgatacagatata
gaggagagggaggcccccctgaccgtccctctggacagaagccgagcctctgtcgtgatc
gatagcaatacagatgacaaggaagaagtctcagcagcgctcacactggcacatctaaga
gagagccgggccgttgcgtggaacagagatgcagatgcagaagaggatagggcccaaccg
gtggcccttctggagcaaagccaagcctctgctgggagagacagtgacacagacgtgaag
gaaaaggggctcccagtggagaagacaggaactgttcccaggggtcacacgggcaaggca
tattcggaaaagagtcaacctcctctcagggacagtgatacagaggtgatggaagagaag
agctcactggggttccacctgcagagaagccaagcctctgccacagtgcatgtcaacaca
caagtggtggaggaagtcccaccagggccagctgttatacttctggagaagcatcaagta
cctgtagcatggacacatcaaacagatgtggaagctgaaggaggcccagcaaagctgcct
gtggtgtatctagaagaagcccagcctcctctagctggggactgtggcccagatgcggag
gagaacacatccttagcagcctcagcagtggcagatgtaagaaagagccagcttcatgca
gaagaagatactgggacagagtgggctgcagccgttcttgaacagggcagagcttttatg
gctggggcccagggtgggtcacccgcggcccaagtggagcaggaccttctccctgtctca
aggaataacatagcacatctggtggtggacacaggcactccaggggaacccacccagcca
cagagagagggggcccagacccccacagaaagggagagagaaccacatgtggataggacc
atgaactctggagacaaccacgatgattctgaagatctggacctacaagctacccagtgc
tttgtggagagagagaatcagagcctggaagtccccagcatggaggatgaacccacgcag
gccttcctgtttactctgccccaagagcctggcccttcccgttgcagcttccaggccaca
ggttccctggatgagccatgggaggtcttggctacacagccattctgtccgagagagtct
gaagcctctgagacccagcccattgccacccacattgaagcccatggaccttgcccctct
ccacctacggcagcaccacaagagcaacatccagaaagtccagttcatgcacagtcactg
gggattcaaggcagagggatgcagactgtggaggaagacatgggtacaccaagagaaaca
gcagagagggtgacccctgagagagggccattggagagggaaactgagaaactgccctcg
gaaggagagagggaagatgtgatgggagaggaagaatcaaccagggggatacaggacaga
gaacaaaaacaggtgttagctagggatactcagaaacaagagtctgacaaaagagtaaaa
agtgcaagtactgaaagggatatggagagtttgaaggtagaaattgagacacctaaggaa
atacaagagaaagagagagaaaagcagactcttacaagagaaatatttgacagagaagca
gagaaaccagtagcagagagagagtgtgaggcaggtgggttagaagggaaggtacccaaa
gtgatgctggacagaggcccacagacaggggagacagaggcggggggccaggaccagaaa
ggccaggcctcaggttcgacaccagagcctggagcgggggcgggagaccttcagggactt
gcttcagaccccatagcttctgggagccagtcaggtggaggaaggggtgccccagtgaga
cccaggaggcagcagagaggctacttgaattgtaagatgccacctgctgagaaggcttcc
aggggtgatcaggaatccccagctgcttgtcggcctccggcagtgcaggaagcttctgcg
ccactccagaaccccctcatctctcagagccccaaacgtcctgcccctcagtccctcctt
tcgtcctcttcacctccttcagaaccgcccattcccaggaccagacaaaatgagagtcag
gaagctctggagactcccttttcctcagagctggacgctctccacccaaaacccaaagtc
aagccccaagggtcctctccagtttcttctgtaccccttgagccccaccctaccacctcc
acagaccagcctgtcacccccaagcccacatctcgggccactcggggcaggacacttagg
tcctctgtcaaaacccctgaacgaaatgtctccacagcccctgagctccagccttctgcc
cacacagaccagcctgtcacccccaaacccacatctcgggccactcggggcaggacacag
agggcttctgtcaagactcccgaaccagttatctccacagcccctgagccccagccttgc
acttccacagaccagcctgtcacccccaaacccacatctcgggccactcggggcagggca
ctcaggtcctcagtcaaaacccctgaacgaaatgtccccacagcccctgagctccagaat
tctgcccacatagaccagcctgtcacccccaaacccacatctcgggccactcagggcagg
gcactcaggtcctcagtcaaaacccctgaacgaaatgtctccacagcccctgagctccag
aattctgcccacacagaccagcctgtcacccccaaacccacatctcgggccactcggggc
agggcacttaggtcctctgtcaaaacccctgaacaaaatgtccccacggcccctgagctc
cagccttcggcccacacagaccagcctgtcacccccaaacccacatctcggggcaggaca
cagagggcttctgtcaagactcccgaaccagttatctccacagcccctgagccccagcct
tccacttccacagaccagcctgtcacccccaaacccacatctcgggccactcggggcagg
acacttagggcctctgtcaaaacccctgaacgaaatgtctccacagctcctgagctccag
ccttctgcccacacagaccagcctgtcacccccaaacccacatctcaggcccctcggggc
aggacacttaggtcttctgctaagacccctgaaccagttgtccccataactcctgagccc
cagccttccacctctaaagaccagtctctcacccctgagcccacatctcaggccactcgg
ggcaggacacataggtcctctgtcaagacatcccagccaactgaacccacagctcctgac
cttgaaccttcgtcccccacagaccagcctgtcacccccaaagtcatagctcagggtggt
cagagcaggacactaaggtcttctacagtaagtgctgtgccagttcctaccacccctgaa
ttccactctccagtccccacagaacagcctattccccctgagcccatccctgaagccaat
tgcagcaggaggccaagggccactaggaaacctgggtctctcacagctcacgttcatgaa
ccctactctgcgccctccgaacctaactcccggtcctcaaggaaccagagacgaggggcg
gtgagagcagccgagtcccttagcaccattcctgagcctgcctttgcccagcttcccgag
gcacccactcatgctccccagatcccaaagggggaggcagcagatagatctggcttcacc
ccagagccccagcctgaggcctctcaaaatcacaagaggcctttagctactgtggactca
cctccacttcaaaaacggctccaaagaggagaagttccccagaagacagcattccttaag
gaagaagaaaatcctgcagcgaagctgaggaagatagaggatgtagtgattccaggacca
ggcaagagaaagagagagcagacagaggaggagccccgggaaataccgagccgcagcctg
cgacggaccaaacctatccaagagtccacggcccccaaagtgctcttcacaggcgtggta
gatgctcatggagagcgggcagtgctggccctggggggcagtatggccagctcagtggct
gaggcttcccacctggtgacggatcggatccgccggacagtcaagttcctgtgtgccctg
gggcggggcatccccatcctctccctggactggctgcaccagtcccgcaaggcaggttgc
ttcttgcccccggctgaatatgtggtgactgatcctgagcaggagaagaactttggcttc
agccttcgggaggccctgagccgggctcgggagcgaaggctgctggagggctatgagatt
cacgtgaccccaggagtccagccaccaccacctcagatgggagagatcatcagctgctgt
ggaggcaccgtcctacccagcatgccccggtcctataagcctcagagagttgtgatcaca
tgttcccaggacttccctcgatgtgccattccatttcgggttgggctgcccatcctctca
cctgagttcttgctcacaggagtactaagcagggaagccaagccagaggcctttgtcctc
tccactttggaaatgtcatccacctga

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