Balaenoptera musculus (blue whale): 118903683
Help
Entry
118903683 CDS
T09887
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bmus04040
]
118903683 (SCN10A)
Ion channels [BR:
bmus04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118903683 (SCN10A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
CcmD_alt
Lustrin_cystein
IQ
Motif
Other DBs
NCBI-GeneID:
118903683
NCBI-ProteinID:
XP_036724871
UniProt:
A0A8B8YUY6
LinkDB
All DBs
Position
11:61141168..61215695
Genome browser
AA seq
1965 aa
AA seq
DB search
MEFPFGSLATTNFHRFTPESLVEIEKRIAAKQEAKKAKEKSKKQKDQEEKPRPQLDLKAC
NQLPKFYGELPAELFGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITITILVNCVGMTQTELPERMEYVFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYVGEAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVRKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNCTVVNETANYSSHEKREW
NFCHRDPDFYTNKPGTSDPLLCGNGSDSGHCPEGYFCLKTSDNPDFNYTSFDSFAWAFLS
LFRLMTQDSWERLYQQTLRASGKIYMFFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATI
DEIEAKEKKFQEALEVLRTEQEVLAALGVDTTSLHSHNGSSLASKNASVRRHRMKPRVAE
GSTDDNKSLQSESYNEHRMSFLGLTSGRHQASHGSVFHFQAPGRDISFPDGVTDDGVFPG
DRESLRGSLLLGRDASQQGPLPRSPLPQTPNPGLGRGEDGPPTLPTGELAPGAIEVSAFD
AGQKTYLTAEYLNEPFQAQRAMSVVSIMTSVLEELEESKQRCPPCLTSLAQKYLIWDCCP
TWVKLKTLLFTIVTDPFAELTITLCIVVNTIFMAMEHYGMSPAFEAMLQIGNIVFTVFFT
AEMVFKILAFDPYYYFQKNWNIFDCIIVTVSLIELGAVRKGSLTVLRTFRLLRVFKLAKS
WPTLNTLIKIIGNSMGALGNLTIILAIIVFVFALVGKQLLGDNYRDNRRKISAPNEEWPR
WHMHDFFHSFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALL
LNSFSTDNLTAPEDDGEVNNLQVALARIQVLGRRTKKALCSFLNWPFLLPRPKAEPQLVV
KLPLSTSKAENHITADTAAGSPGGLLAPRGPSDDHSDFITNPNIWVSVPIAEGESDLDDL
EDDGEEDAQSTQQEVIPQGQQEELQQVGRDEDHLPPRSSGSGMSSEDLAPYLGEKWKDEA
PAQGPTEGVDDTSSSEGSTVDCLDPEEILRKIPELADDLDEPDDCFTEGCIRQCPFCKVN
SSKFPWAMGWQVRKICYLIVEHSWFESFIVFMILLSSGALAFEDFYLDQKPTVKALLEYT
DRVFTFIFVFEMLLKWVAYGFKNYFTNAWCWLDFLIVNISLTSLIAKVLQYSDMASIKAL
RTLRALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFQK
CINKTSEGFLLVPWTTVNNMSDCERQNHTGSFFWVNVKVNFDNVAMGYLALLQVATFKGW
MDIMYAAVDSREVNMQPKWEDNVYMYLYFIIFIIFGGFFTLNLFVGVIIDNFNQQKKKLG
GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIIIMVLICLN
MITMMVETDEQSEEKTKILNKINRFFVAVFTGECVMKMFALRHYYFTNGWNVFDLIVVVL
SIGSLVFSAILTSLGNLFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFN
IGLLLFLVMFIYSIFGMANFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSP
ILNTGPPYCDPSLPNSNSTRGDCGNPIVGILFFTTYIIVSFLIVVNMYIAVILENFNVAT
EESTEPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNGNILIHMD
LPLVPGDKIHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWK
QEDISATVIQKAYRSYVLHRSMTIANPPPVPRAEEVAVSLPDEGFVAFVANENCVLPGKS
ETASATSFPPSYDSVTRGLSDQVNLSTSSSIQNEGEAATKEATGP
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctttgggtctctggcaactaccaacttccatcgattcaccccagagtct
ctggtggagattgaaaaacgaattgctgctaagcaggaggcaaagaaagccaaagagaag
tccaagaaacagaaggaccaggaggagaagcctcggccccagcttgacttgaaagcgtgc
aaccagctgcccaagttctatggcgagctcccagcagagctgttcggggagccactggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtctgtccactcatatcctttgtggttcagtttatttataacc
atcactattttggtcaattgtgtgggcatgacccaaaccgaacttccagagagaatggag
tatgtcttcactgtcatttacacctttgaagccttgataaagatactggcaagaggattt
tgtctaaatgagttcacttacctgcgagatccttggaactggctggattttagtgtcatc
accctggcgtatgttggtgaagccatagatctccgagggatctcaggcctgcggaccttc
agagtccttagagctttaaaaacagtgtctgtgatcccagggctgaaggtcatcgtggga
gccctgatccactcggtgaggaagctggctgacgtgaccatcctcaccatcttctgcctg
agtgtctttgccctggtgggcctgcagctcttcaagggcaacctcaagaacaaatgtgtc
aagaattgcacagttgtcaacgagacggccaattactcttctcatgaaaaacgggagtgg
aatttctgtcatagggacccagatttctacaccaacaaaccaggcacttctgatccctta
ctgtgtggcaatggatctgattcaggccactgccctgaaggttatttctgccttaaaaca
tctgacaacccagattttaactataccagctttgactcctttgcttgggctttcctctca
ctgttccgcctcatgacacaggattcctgggaacgcctctaccagcagaccctgagggct
tctgggaaaatctatatgttttttttcgtgcttgttatcttcctgggatctttctacctg
gtcaatttgatcttggctgtggtcaccatggcatatgaggagcagaaccaggcaaccatt
gatgaaattgaagccaaggagaagaagttccaggaggcccttgaggtgctccggacggag
caggaggtgctggcagccctgggggttgacacaacctctctccactcccacaatggatcc
tctttggcctccaaaaatgccagtgtgagaaggcacagaatgaagccaagggtggcagag
ggctccacagacgacaacaagtcactccagtctgagtcttacaacgagcacagaatgtct
ttcctaggcctcacctctgggagacaccaggctagccatggcagtgtgttccatttccag
gcccctggccgagacatctcattccctgatggggtcacagatgatggagtctttcctgga
gaccgtgaaagccttcggggttctctgctgctgggtagggatgcaagccagcaaggcccc
ctccctaggagtccactgcctcaaactcccaaccctggcttagggcgtggagaagatgga
ccccccaccttgcccactggtgagcttgcccctggagccatcgaagtctcggcatttgat
gcaggacagaagacttacttgacagcagaatacttgaatgaacctttccaagcccaaagg
gcaatgagtgtcgtcagtatcatgacctctgtcctcgaggaactcgaggagtctaaacag
aggtgcccaccctgcttgaccagcttggctcagaagtatctgatctgggattgctgcccc
acgtgggtgaagcttaagacccttctcttcacaattgtgacggacccctttgcagagctc
acaatcaccctgtgcattgtggtgaacaccatcttcatggccatggagcactacggcatg
agtcccgctttcgaagccatgctccagattggcaacattgtctttactgtgttttttact
gctgaaatggtcttcaaaatcttagcgttcgacccctactattacttccagaagaactgg
aacatctttgactgcatcatcgtcacagtgagcctgatagagctgggtgcggtcaggaag
gggagcctgacggtgctgcggaccttccgcctgctgcgggtcttcaagctggccaagtca
tggccgaccttaaacacgctcatcaagatcatcggcaactcgatgggggctctggggaac
ctcaccatcatcctggccatcattgtcttcgtctttgctctggttggcaagcagctcctc
ggggacaactaccgtgacaaccggcgcaaaatctcggcacccaacgaagaatggccacgg
tggcacatgcacgacttcttccactccttcctcatcgtcttccggatcctctgtggagag
tggattgagaacatgtgggcctgcatggaagtcggccagaagtccatctgcctcatcctt
ttcttgacggttatggtgctgggcaacctggtggtgcttaacctgttcattgccctgctg
ctgaactccttcagcaccgacaacctcacagccccagaggacgacggggaggtgaacaac
ctgcaggtggccctagcgaggatccaggtgttaggccggcgcaccaagaaggccctttgc
agcttcctcaactggcccttcttgctcccccggcccaaggcggagccccagctggtggtg
aaactcccactctccacctccaaagctgagaaccacattactgctgacacggctgcgggg
agccctggagggctcctggctcccagaggccccagtgatgaccacagtgacttcatcacc
aatcctaacatatgggtctctgtgcccattgccgagggcgagtctgacctcgatgacttg
gaggatgatggtgaggaggatgcgcagagcacccagcaggaagtgatcccccaagggcag
caggaggagctgcaacaagtcgggagagatgaggaccacctgccacccaggagctcaggt
tctggaatgtcctctgaggacctggctccatacctaggtgagaagtggaaagacgaggct
cctgctcagggccctacagagggagtggacgacacgagctcctcagaaggcagcaccgtg
gactgcctggatcctgaggagatcctgaggaagatccctgagctggcggatgacctcgat
gagccagatgactgcttcacagaaggctgcattcgccagtgtcccttctgcaaagtgaac
agctccaagtttccatgggccatgggctggcaggtgcgcaagatctgctacctcattgtg
gagcacagctggttcgagagctttatcgtcttcatgatcctgctcagcagtggagcgctg
gcctttgaagatttttaccttgaccagaagcccacggtgaaggccttgctggagtacacc
gacagggtgttcacgtttatctttgtgtttgagatgctgctcaaatgggtggcctatggc
tttaaaaattacttcaccaatgcctggtgctggctggacttcctcatcgtgaatatctca
ctgacaagccttatagcgaaggtgctgcagtattctgatatggcatccatcaaagccctt
cggaccctccgtgccctgcggccactgcgggccctgtctcgatttgaaggcatgcgggtg
gtggtagatgccctggtgggcgccatcccctccatcatgaacgtcctcctcgtctgcctc
atcttctggctcatcttcagcatcatgggtgtgaacctctttgcagggaagtttcagaaa
tgcatcaacaagaccagtgaaggctttcttcttgtgccttggactactgtgaataacatg
tctgactgtgaacgtcaaaaccacactggaagcttcttttgggtcaatgtgaaggtcaac
tttgataatgttgcaatgggctacctcgcacttctgcaggtggcaacctttaaaggctgg
atggacatcatgtatgcagctgtcgattcccgggaagtgaacatgcagcccaagtgggag
gacaacgtgtacatgtacttgtacttcatcatcttcatcatttttggtggcttcttcaca
ctcaatctcttcgttggggtcatcattgacaacttcaaccaacagaaaaaaaagttaggg
ggccaggacatctttatgacagaggagcagaagaagtactacaatgccatgaagaaactg
ggctccaagaagccccagaagcccatcccacggcccctgaacaagtaccagggctttgtc
tttgacatcgtgaccaggcaaactttcgacatcatcatcatggtcctcatctgcctcaac
atgatcaccatgatggtggagactgatgagcagagtgaagaaaagacaaaaatcctaaac
aaaatcaaccggttctttgtggccgtcttcacgggggagtgtgtcatgaagatgttcgcc
ttgaggcattactacttcaccaatggctggaatgtgtttgaccttattgtcgtggtcctc
tccattggaagcctggtgttttctgcaattcttacatcacttggaaatttattctcccca
acgcttttccgagtcatccgcctggcccggatcggccgcatcctcaggctgatccgcggg
gccaagggcatccgcacactgctcttcgcgctcatgatgtccctgcccgccctcttcaac
attgggctgctgctcttcctggtcatgtttatctactccatcttcggcatggccaacttc
gcctacgtcaagtgggaggctggcattgatgacatgttcaacttccagaccttcgccaac
agcatgctgtgcctcttccagatcaccacgtcggcaggctgggacgggctcctcagcccc
atcctcaacacggggcctccctactgcgaccccagccttcccaacagcaacagcaccaga
ggggactgtgggaaccccatcgtgggcatcctcttcttcactacctacatcatcgtctcc
ttcctcatcgtggtcaacatgtacatcgcggtgattctggaaaacttcaatgtggccacg
gaggagagtacggagcccctgagcgaagatgactttgacatgttctacgagacttgggaa
aagttcgacccggaggccacccagttcattaccttctctgccctctcagactttgcagac
acgctctctggccccctgcgaatcccaaaacccaatgggaatatattaatccacatggac
ttgcccttggtccctggagataagatccactgtttggacatcctgtttgccttcaccaag
aatgttctgggagaatctggggagttggattctctgaaggcaaatatggaggagaaattt
atggcaactaatctttcaaaagcatcctatgaaccaatagcaaccaccctccggtggaag
caagaagacatttcagccactgtcatccaaaaggcctatcggagctacgtgctgcaccgc
tccatgacgatcgccaatcccccgcctgtgcccagggctgaggaggtggctgtgtcactc
ccagatgaaggctttgttgcattcgtggcaaatgaaaactgtgtgctcccaggcaaatct
gaaactgcctctgccacatctttcccaccatcctacgacagtgtcactagaggccttagt
gatcaagtcaacttaagcacatctagctcgatacaaaacgaaggggaggctgccactaag
gaagccactgggccctag
DBGET
integrated database retrieval system
