Balaenoptera musculus (blue whale): 118904080
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Entry
118904080 CDS
T09887
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03082
ATP-dependent chromatin remodeling
bmus05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118904080 (PBRM1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
118904080 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmus03021
]
118904080 (PBRM1)
03036 Chromosome and associated proteins [BR:
bmus03036
]
118904080 (PBRM1)
Transcription machinery [BR:
bmus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118904080 (PBRM1)
Chromosome and associated proteins [BR:
bmus03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
118904080 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118904080
NCBI-ProteinID:
XP_036725703
UniProt:
A0A8B8YT86
LinkDB
All DBs
Position
11:complement(67836398..67946104)
Genome browser
AA seq
1725 aa
AA seq
DB search
MRRLAFRGAGCALVKLKKLDSMGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLS
NLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQ
KLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADD
EDDDEDGQDNQGTVTEGSSPSYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPD
YYAIIKEPIDLKTIAQRIQNGSYKSVHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKI
FYMKKAEIEHHEMTKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTNKYYRNKRAVQG
GRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNN
QGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENA
KRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKRNTLDS
EMLGLRRLSSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILE
PMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKE
LGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIF
LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL
IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL
AEIPAVDPSFPNKPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYED
AVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEE
KREAEKSEDSSGAAGLSGLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLW
EDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYF
KLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANA
DKGDDEKNTDNSEDSRTEDSFNLEKEKEDVPVEMSNGEPGCHYFEQLRYNDMWLKVGDCV
FIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETC
PMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVV
DDEIYYFRKPTVPQKEPSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQ
LQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDY
SFGELSRLVGTEWRNLETAKKAEYEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALM
GVVPPPTPMGMLNQQLTPVAGMMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLP
PGVPGLPGIPPPGVMNQGVAPMVGTPAAGGSPYGQQVGVLGPPGQQAPPPYPGPHPPGPP
VIQQPTTPMFVAPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQ
ESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNLENL
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcttttcgaggagctggttgtgctctggtaaagctgaagaagttggat
tccatgggttccaagagaagaagagctacctccccttccagtagtgtcagcggagacttt
gatgatgggcaccattctgtgtccacgccaggcccaagcaggaaaaggaggagactttcc
aatcttccgactgtagaccctattgccgtgtgccatgaactctacaacaccatccgagac
tataaggatgagcagggcaggctcctctgtgagctcttcattagggcaccaaagcgaaga
aatcaaccagactattatgaagtggtttctcagcccattgacttgatgaaaatccaacag
aaactaaaaatggaagagtatgatgatgttaatctgctgactgctgacttccagttgctt
tttaacaatgcaaaggcctattataagccagattctcctgaatataaagctgcttgcaaa
ctctgggatttgtaccttcgaacaagaaatgagtttgttcagaaaggagaagcagatgat
gaagatgatgatgaagatgggcaagacaatcaaggcacagtgaccgaaggatcttctcca
agttacttgaaggagatcctggagcagcttcttgaagccatagttgtagccacaaatcca
tcaggacgtctcattagcgaactttttcagaaactgccttctaaagtgcaatatccagac
tattatgcaataattaaggagcctatagacctcaagaccattgcccagaggatacagaat
ggaagctacaagagtgttcatgcaatggccaaagatatagatctcctagcaaaaaatgcc
aaaacttataatgagcctggttctcaagtattcaaggatgcaaattctattaagaaaata
ttttatatgaaaaaggcagaaattgaacatcatgaaatgactaagtcaagccttcggatg
aggactccatcaaatttggctgcagccaggctgacaggtccttcgcacagtaaaggcagc
cttggtgaagagagaaatcccactaacaagtactaccgtaataaaagagcagtccaaggg
ggtcgtttatcagcaattaccatggcacttcagtatggctcggaaagtgaagaggatgct
gctttagctgctgcacgttatgaagaaggagagtcggaagcagagagcattacttcattt
atggatgtttcaaatcctttttatcagctttacgacacagttaggagctgtcggaataac
caagggcagctaatagctgaaccttttttccatttgccttcaaagaaaaaataccctgat
tattatcagcaaattaaaatgcccatatcactacaacagatcagaacaaagctaaagaat
caagaatatgaaactttagatcatttggagtgtgatctgaatttaatgtttgaaaatgcc
aaacgctataatgttcccaactcagccatctacaagcgagttctaaaactgcagcaagtc
atgcaggcaaagaagaaggagcttgccaggagagatgacattgaggatggagacagcatg
atttcttcagcaacctctgatactggtagtgccaaaagaaaaaggaacactcttgacagt
gagatgttgggtctcaggaggctatccagtaaaaagaacattagaaagcagcgaatgaaa
atcttgttcaatgttgttcttgaagctcgtgagccaggttcaggcagaagactttgtgat
ctatttatggttaaaccatccaaaaaggactatcctgattattataaaatcatcttggag
ccaatggacttgaaaataattgaacataacatccgcaatgacaaatatgcaggggaagag
ggaatgatagaagacatgaagctgatgttccggaatgccaggcactacaacgaggagggc
tcccaggtgtacaatgatgcgcacatcctggagaagttactcaaggataaaaggaaagag
ctgggcccactgcctgatgatgatgacatggcttctcccaaactcaaactgagtaggaag
agcggtatttctcctaaaaaatcaaaatatatgactccaatgcagcagaaactaaatgaa
gtctatgaagctgtaaagaactatactgataagaggggtcgccgcctcagtgccatattt
ctgaggcttccctccagatccgagctgcctgactactatttgaccattaaaaaacccatg
gacatggaaaaaattcgaagtcacatgatggccaacaaataccaagatatagactccatg
gttgaggactttgtcatgatgtttaacaatgcctgtacatacaatgaaccagagtctttg
atctacaaagatgcccttgtcctacacaaagtcctgcttgaaactcggagagacctagaa
ggagatgaggactctcatgtcccaaatgtaaccttgctgattcaggagcttatccataat
ctttttgtgtcagtcatgagtcatcaggatgatgaaggaagatgctacagtgattcccta
gcagaaattcctgctgtggatcccagctttccaaacaaacctcctcttacttttgacata
attaggaagaatgttgaaaataatcgctaccggcggctcgatttatttcaagagcatatg
tttgaagtattggagagggcaagaaggatgaatcggacagattctgaaatatatgaggat
gcggtagaacttcagcagttttttattaaaattcgtgatgaactctgcaaaaatggagag
atccttctttcaccagcactcagctataccacaaaacatttacataatgatgtggagaaa
gagaaaaaggaaaaactaccgaaagaaatagaggaagataaactaaaacgagaagaagaa
aaaagagaagctgaaaagagtgaagattcctctggagctgcaggcctctcaggcttacat
cgcacatacagccaggactgcagctttaagaacagtatgtaccatgttggagattacgtc
tatgtggagcctgcagaggccaatctacaaccacatatagtctgtattgagagactgtgg
gaagattctgctggtgaaaaatggttgtatggctgttggttttatcggccaaatgaaaca
ttccatttggctacacgaaaatttctagaaaaagaagtttttaagagtgactattacaat
aaagttcctgttagtaaaattctaggaaaatgtgtggtcatgtttgttaaggaatacttt
aaattatgcccagaaaactttcgagatgaggatgtttttgtctgtgaatcacggtattct
gccaaaaccaaatcttttaagaaaattaaactatggaccatgcctatcagctcagttaga
tttgtccctcgagatgtgcccttgcctgtggtccgagtggcctctgtatttgcaaatgca
gataaaggggatgatgagaagaacacagacaactcagaggacagtcgaactgaagacagt
tttaacttggaaaaggagaaagaagacgtccctgtggaaatgtctaacggtgaaccaggt
tgccactactttgagcagctccggtataatgacatgtggctgaaggttggcgactgtgtc
ttcatcaagtcccatggcctggtgcgccctcgtgtgggcagaattgaaaaggtatgggtc
cgagatggagctgcatatttttacggccccatcttcattcacccagaagagacggaacac
gagcccacaaaaatgttctacaagaaagaagtgtttctgagtaatctggaagaaacctgc
cccatgacatgtattctaggaaagtgtgctgtattgtcattcaaggacttcctctcctgc
aggccaactgaaattccagaaaatgacattctgctttgtgagagccgctacaatgaaagt
gacaagcagatgaagaaattcaagggactgaagaggttttcactctctgctaaagtggta
gatgatgaaatttattacttcagaaaaccgactgttcctcagaaggagccctcaccttta
ttggaaaagaagatccagttgctagaagctaaatttgctgagttagaaggtggagatgat
gatattgaagagatgggagaagaggatagtgaggtcattgagcctccttctctacctcaa
cttcagactcccctggccagtgagctggatctcatgccctacacacccccacagtctacc
ccaaagtctgccaaaggcagtgcaaagaaggaaggctccaaacggaaaatcaacatgagt
ggctacatcctgttcagcagtgagatgagagctgtgattaaggcccagcacccagactac
tcttttggggagctcagccgactggtggggacagaatggagaaaccttgagacagccaag
aaagcagaatatgaagagcgggcagctaaagttgctgagcagcaggagagagagcgagca
gcacagcaacagcagccgagtgcttctccccgagcaggcacccctgtgggggctctcatg
ggggtggtgccaccaccaacaccaatggggatgctcaatcagcagttgacacctgttgca
ggcatgatgggtggctatccgccaggccttccacctttgcagggcccagttgatggcctt
gttagcatgggcagcatgcagccacttcaccctggggggcctccaccccaccatcttccg
ccaggtgtgcccggcctcccgggcataccaccaccgggtgtgatgaaccaaggagtggcc
cctatggtagggactccagcagcaggtggaagtccatatggacagcaggtaggtgttttg
gggcctccagggcagcaggcaccacctccatatcctggcccacatccacccggcccccct
gtcatacagcagccaacaacacccatgtttgtggctcccccaccgaagactcaacggctt
ctccactcagaggcctacctaaaatatattgaaggactcagtgctgagtccaacagcatt
agcaagtgggaccagaccctagcagctcgaagacgcgatgtccatttgtcaaaagaacag
gagagccgactcccctctcactggctgaaaagtaaaggggcccacaccaccatggcagac
gccctctggcgccttcgggatctgatgctccgagacaccctcaacattcgccaagcatac
aatctagaaaacctttaa
DBGET
integrated database retrieval system
