Balaenoptera musculus (blue whale): 118904377
Help
Entry
118904377 CDS
T09887
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha isoform X1
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bmus04040
]
118904377 (SCN11A)
Ion channels [BR:
bmus04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
118904377 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
118904377
NCBI-ProteinID:
XP_036726303
UniProt:
A0A8B8YUV4
LinkDB
All DBs
Position
11:60977168..61104657
Genome browser
AA seq
1817 aa
AA seq
DB search
MVLGEWNLREDSVIFYLPELSEDLLLVSAPRVKMDDRCYPVIFPDARNFRPFTPDSLAAI
KKRIAIQKEKKKSKDQTAAEPQPRPQLDLKVSRKLPMLYGDIPHELIGKPLEDLDPFYRN
HKTFMVLNKKRTIYRFSAKRALFIFGPFNSIRSLAIRISVHSLFSMFIICTVIINCVFMA
MTRGKDSINIDTESAEYVFTGIYIFEALVKILARGFILDEFSFLRDPWNWLDSIVFATAF
VSYSPYIKGSSISLSSLRTFRVFRALKAISVISGLKVIVGALLRSVKRLVDVMILTLFCL
SIFTLVGQQLFMGNLNQKCVRKDCDSDYKDYCFEKKDSTEFRVCGTWMESGACSEQFECK
HTNKNPDYNYTNFDNFGWSFLAVFRLMTQDSWEKLYQQTLRTSGLYSVFFFVVVIFLGSF
YLINLTLAVVTMAYEEQNKNVAAETEAKEKMFQEAQQLLKEEKEALVAMGIDRSSLNSLE
ASSFSPKKRKLFGNKKRKSFFLRKSGKDQVPGLDSDEDSSKKPHLLEQTKRLSQNLSVDH
CDEHGDPFQRQRALSAVSILTITMHEQEKSQEPCLPCGENLASKYLVWDCSPRWLCIKKA
LRTMMTDPFTELAITICIIINTLFLAMEHYKMDQSFENMLYTGNLVFTGIFMAEMCLKII
ALDPYHYFRRGWNIFDSIVALLSFAEVIINSMCPGKQSCMSLRSLRVLRVFKLAKSWPTL
NTLLKIIGHSVGALGNLTVVLAIVVFIFSVVGMQLFGSKFNCIKSNSKSHDPAVPCLRRW
HMGDFYHSFLVVFRILCGEWIENMWECMQEANQALCIIVFLLIMVIGKLVVLNLFIALLL
NSFSNEERDGHLEGEVRKTKVQLALDRFCRAFCFVMYTLEHFCTKWCRRQHLPKQKEVTE
GPEAESKGVIPLVTEMRKGPETWEEFGVLTSAPKTLSVGHDRTWLAPLAEEEDDAESPGE
DKAQPVTQPEAGKQCQASELHQKTKEPTSPGAQSVEMDIFSEDDPYLSIQNPRKKSDATS
VLSECSTTGPQDPFRRVLEMVPKKEPERCLPKGLDCCSPCCTVDKRKSPWIIWWKLRKTC
YQIVKHSWFESFIIFVILLSSGALVFEDIYLGTQPKIQAILNCTDSIFTYIFILEMGLKW
VAFGFRKYFTSAWCWLDFIIVIVSVTSLIDLKVLKSFRILRALRPLRALSQFEGMKVVVN
ALIGAIPAILNVLLVCLIFWLIFCILGVSLFSGKFGRCVNVTDGNSVINYNIVANRSQCE
SGNFSWFTLKVNFDNVGMAYLALLQVATFKGWMDIMYAAVDSRGEGQQPRFEENSLMYVY
FVVFIIFGSFFTLNLFIGVIIDNFNQQQKKLGGQDIFLTEEQKKYYNAMKKLGSKKPQRP
IPRPLNKCQGLVFDLVTHQVFDIIIIILIFLNMVSMMAESYGQSKAMELFLERLNLAFVV
VFTIECLIKIFALRQYYFISGWNLFDCVIVVISIVSTMVSALKTQAHIPFPPTLFRIVRL
ARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIFGMNCFCKVKEESG
IDDIFNFKTFKGSMLCLFQITTSAGWDALLSPMLQSKDSCNPKLENCHLSAIAITYFVSY
IIISFLIVVNMYIAVILENFNIATEESEDPLSEDDFEIFYEVWEKFDPEATQFIRYSALS
DFADALPEPLRVAKPNKYQFLVMDLPMVSGDRLHCLDILFAFTARVLGESSGLDSMKAVM
EEKFMEANPFKKLYEPIVTTTKRKEEERCAAVIQKAFRKYMMKTKCTLEDRPHSPLQTLC
NGDLSSSGVAEGKVHYD
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggtccttggagagtggaatctcagggaagacagtgtaattttctacctcccagagctc
tctgaggatctgctgcttgtctctgccccgagggtgaagatggatgacaggtgctacccg
gtgatcttcccagatgcgaggaatttccgccccttcactcctgactctttggctgcaatc
aagaagcggatcgccatccaaaaggagaaaaaaaagtccaaagaccagacagcagcagaa
ccccagcctcgacctcagcttgacctaaaggtgtccagaaagttgcccatgctctatggt
gacattccccatgagctgatagggaagcccctggaagacttggacccattctacagaaat
cataagacatttatggtgttgaacaaaaagagaacaatctaccgcttcagtgccaaacgt
gccttgttcatttttgggcctttcaattcaatcagaagtttagccattagaatttcagtc
cattcattgttcagcatgttcatcatctgcaccgtcatcatcaactgcgtgttcatggcc
atgactcgtgggaaggacagcattaacatagatactgagagtgctgagtatgtcttcact
gggatttatatatttgaagcattagttaaaatattggcaagaggttttattctggatgag
ttttctttccttcgagatccgtggaactggctggactccattgtctttgcaacagcgttt
gtatcatattcaccatatatcaagggcagcagcatcagtctgtcatccctgcgtaccttc
cgagtgttcagagctttgaaagcaatttcagtaatttcaggtctgaaggtcattgttggg
gccttgctgcgctctgtgaagaggcttgtcgatgtgatgatcctgactctcttttgcctc
agcatcttcaccctggtcggtcagcagctcttcatgggaaatctgaaccagaaatgtgtg
aggaaagactgtgactctgactataaagactattgctttgaaaagaaagattccactgaa
ttcagagtatgtggcacatggatggagagcggggcttgttctgaacaatttgaatgcaaa
cataccaataaaaatcctgactataattacacgaattttgacaactttggctggtctttt
cttgccgtgttccggcttatgacccaagattcctgggagaagctttatcaacagactttg
cgcacctcagggctctactcagtcttcttctttgtggtggtcatcttcctgggctctttc
tacttgattaacttaaccctggctgttgtcaccatggcttatgaggaacagaacaagaat
gtagctgctgagacagaagccaaggagaagatgttccaggaagcccagcagctgttaaag
gaggagaaggaggctctggttgccatgggtattgacagaagctcacttaattcccttgaa
gcatcgtctttttccccgaagaagagaaagctatttggtaataagaaaagaaaatccttc
tttttgagaaagtctgggaaagaccaggttccaggattagattctgatgaagattcttca
aaaaagccacacctacttgaacaaaccaaacgactgtcccagaatctgtcagtggaccac
tgtgatgagcatggagaccccttccaaaggcagagagcgctgagcgctgtgagcatcctt
accatcaccatgcacgaacaagaaaaatcacaggaaccttgcctcccatgtggggaaaac
ctggcatccaaatacctcgtgtgggactgtagcccccggtggctgtgcattaagaaggcc
ctgagaaccatgatgactgacccctttactgagctggccatcaccatctgcatcataatc
aacactctcttcttggccatggagcattacaaaatggaccagagttttgagaatatgttg
tacacagggaatttggttttcactggcattttcatggctgaaatgtgcctaaaaatcatt
gcgctggatccctaccactactttcgtcgaggctggaacatttttgacagcattgttgct
cttctgagctttgcagaggtgataataaatagtatgtgtccaggaaaacaaagttgtatg
tcacttcgttccttaagagtgctgagggtcttcaagttagccaaatcctggccaacttta
aacacactgcttaagataattggccattccgttggagcccttggaaacctgactgtggtc
ttggccattgtggtctttattttctcagtagttggcatgcagctttttggctctaaattc
aattgcataaagagtaattcaaagtcccatgatcctgcagtcccatgtttacgacgctgg
cacatgggggatttctaccactcctttctggtggtattccgcatcctctgtggggaatgg
atcgaaaacatgtgggaatgtatgcaagaagctaaccaagcactgtgcattattgtgttt
ctgttgatcatggtgataggaaaactcgtggtactcaacctctttattgccttgctgctc
aattccttcagcaatgaggagagagatggacacttggaaggagaagtcaggaaaaccaaa
gtccagttagccctggaccggttctgccgggctttttgttttgtgatgtatactcttgag
catttttgtaccaagtggtgcaggagacaacatttaccaaagcaaaaagaggtgacagaa
ggccctgaggcagagagcaaaggtgtcattcccctggtcacagagatgagaaagggccca
gagacctgggaggagtttggtgtactgacttccgcaccaaagaccttgagtgtcgggcat
gatcggacttggttggccccactagcagaggaagaagatgatgctgaatcccctggtgaa
gataaggcacagcctgtcacacaacctgaggctggaaaacagtgtcaggccagtgaactc
catcagaagaccaaggagcccaccagtccaggagctcagagtgtggaaatggacatattc
tctgaagatgatccttatctgtcgatacagaatccccgaaagaagtctgatgctacgagt
gtgctctcagaatgtagcaccactggtccacaggatccttttaggcgggtacttgaaatg
gttcccaaaaaggaaccagagagatgtttgcccaaaggcctggattgctgctctccatgc
tgtactgtggacaagagaaagtccccctggatcatttggtggaaactgcggaaaacctgc
taccaaatagtgaaacacagctggtttgagagctttattatctttgtgattctgctgagc
agtggggcactggtatttgaagatatttaccttggtacacaacccaaaatccaagcaata
cttaattgtactgacagtattttcacatacatttttatcttggagatgggtctgaaatgg
gtggcctttggatttaggaagtacttcaccagtgcctggtgctggctcgatttcatcatt
gtgattgtctctgtgaccagtctcatcgacttaaaggtcttgaagtccttccggattctg
cgagcgctgaggcctctgcgagcgctgtcccagtttgaaggaatgaaggtggtagttaat
gctctcataggtgccatacctgccattctgaatgttttgcttgtctgcctcattttctgg
ctcatattttgtatcctgggagtaagtttgttttctggaaaatttggaagatgtgttaat
gtgacagatggaaactcagttataaattacaacattgttgcaaaccggagtcaatgtgaa
agtggaaatttctcctggttcaccctgaaagtcaactttgacaatgtgggaatggcttac
ctcgcgctgctgcaagtggcaacatttaagggctggatggatattatgtatgcagctgtt
gattccagaggggaaggacaacagccaaggtttgaggagaactcattaatgtatgtttac
ttcgtagtttttatcatctttggctcattcttcactctgaatctctttattggtgttatt
attgacaacttcaaccaacagcagaaaaagttaggtggccaagacatctttctgacagaa
gaacagaagaaatactataatgcaatgaaaaaattaggatccaaaaaacctcaaaggccc
atcccaaggcctctgaacaaatgccagggtcttgtttttgacctagttacacaccaggtc
tttgacatcatcatcatcatcctcattttcctcaacatggttagcatgatggctgaatca
tatggccagtccaaagccatggaactcttccttgagcgtctcaacctggcctttgtggtc
gtctttacaattgagtgtctcatcaaaatctttgctttgaggcaatactacttcatcagt
ggctggaatttatttgattgtgtgatcgtggtcatttctattgtcagtacaatggtttct
gccttgaaaacccaggcacacattcctttccctccaacactcttcagaattgtccgcttg
gctcggattggccgaatcctgagacttgttcgggcagcacgaggaatcagaactctcctt
ttcgcgctgatgatgtctcttccctctctattcaatattggtcttctactctttctggtt
atgtttatttatgccatttttggtatgaactgtttttgcaaagtgaaggaagagtctgga
attgatgacatattcaacttcaaaactttcaaaggcagcatgctctgcctcttccagata
accacgtcagcaggctgggatgccctcctcagccccatgttgcaatcaaaagactcatgt
aaccccaagttagagaactgtcacctctctgccatagccataacctacttcgtcagttat
atcatcatctcctttctcatcgtggtcaacatgtatattgctgtgattttagaaaacttc
aatatagccactgaagaaagcgaggaccctttgagtgaagacgactttgaaatattctac
gaagtctgggaaaagtttgacccagaagcaacacagtttatcagatattctgctctttct
gactttgccgatgcccttcctgagcctctgcgtgtggcaaagccaaataaataccaattt
ttagtcatggacttgcccatggtgagcggagatcgccttcattgcctggatattctgttc
gctttcaccgctagggtacttggtgagtccagtggcctggatagcatgaaagcagtgatg
gaggagaagttcatggaagccaaccctttcaagaagttatatgaacccatagtcaccacc
accaagaggaaggaagaggaaagatgtgctgctgttattcaaaaggcctttcgaaagtac
atgatgaagaccaagtgtaccttggaagacaggcctcattcacccctccagacactctgc
aatggagacttgtccagctctggggtggccgagggcaaggtccactatgactga
DBGET
integrated database retrieval system
