Balaenoptera musculus (blue whale): 118905298
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Entry
118905298 CDS
T09887
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
bmus
Balaenoptera musculus (blue whale)
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmus03021
]
118905298 (SCAF8)
03041 Spliceosome [BR:
bmus03041
]
118905298 (SCAF8)
Transcription machinery [BR:
bmus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118905298 (SCAF8)
Spliceosome [BR:
bmus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
118905298 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
DAXX_hist_bd
Motif
Other DBs
NCBI-GeneID:
118905298
NCBI-ProteinID:
XP_036727816
UniProt:
A0A8B8Z468
LinkDB
All DBs
Position
12:complement(12438561..12639846)
Genome browser
AA seq
1270 aa
AA seq
DB search
MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN
NVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVS
QITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQL
TAAAAAASTLNPLEQGVSLNKKLMDRFDFGEDSEHSEEPKKEIPASQLSHVSESVNNSIF
HQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSVSPSQGSSQQHFLEPEA
NLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRS
GSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLW
VGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIG
SKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWE
SVKSSEPVKETVQTTQSPPPVEKETVATTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFP
VSMQVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPPVVPPPTIPPVVPTSLVQPPL
SMTPETVKDVGFGSLVLPGGSVASSLATSTLPAGSVFNPPTKQAEPEEKVPHLIDHQISS
GENTRSVIPNDVSGGSAILGGQPPNVTNNSGILGVQRPNVSSNNEILGVRPSNVSNSSGI
IGAQPPNILNNSGILGIQPPSVSSSSGLLGMLPPNIPNNSGLIGVQPPGVPNTPGLLGTQ
PPAGPQNLPPLNLSNQRMPAMPMLDIRPGLIPQTPGPRFPLMQPGIPPQRGLPPPAVLDA
ALHPPPRGPFAPGDIFSPPERPFLVPGRQSVDNVANPEKRVPLGSDSVQQEGDRDYRFPP
VETRETISRPPPVDVRDVVGRPVDPREGPGRPPLDGRDHFGRPPVDIRENLVRPGIDHLG
RRDHFGFTPEKPWGHRDFDEREHRVLPVYGGPKGLHEERGRFRSGNYRFDPRSGPWNRGF
GQEVHRDFDDRRRPWERQRDRDDRDFDFCREINGNRFGRERIQNTWVPPPHARVFDFFEG
ATSQRKGDNVPQVNGENTERHAHPPPLPAQSDPELYEKLTSSSEINKEKSDTVADIESEP
VVESTETEGT
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaaaaccttcaatagcgagttgtattccctgaatgactacaagccaccc
atttctaaagcgaaaatgacccaaattactaaagcagccatcaaagctattaagttctat
aaacatgtggtacagagtgttgagaaattcattcagaaatgtaaaccagaatacaaggta
cctggactttatgttattgactctattgtacgacaatctcgacatcagtttggtcaagaa
aaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaatttatat
cgttgccctggagacgacaagagtaaaatagtgagagtattaaacttatggcagaagaat
aatgtatttaaaagtgagattattcaacctcttttggatatggcagcggggattcctcct
ccagttgtcacacctgttttggccagtactactgctgctatgagcaataccccaggaact
cctgtgacacctgttactccagccaatgtggtccaaggtttacctgatccgtgggtgtct
cagataacaaatacagatacacttgcagctgtagctcagatcttacaaagtcctcaaggc
caacagcttcagcagttaatacagactttacagatacagcagcagaagcctcagccttcc
atcttgcaagccctggacgccggccttgtggtccagctgcaggctcttacggcgcagctc
acggcagcggccgcagcggccagcacccttaatcccctagaacagggcgtgtctttgaac
aagaagttgatggataggtttgattttggggaagattctgagcatagtgaagaacccaaa
aaggaaattccagcttctcaactttctcatgtttcagaatctgtgaacaattccatcttt
catcagatagcagaacagctacagcagcaaaatcttgaacatctcagacagcaactcctg
gaacagcaacagcctcaaaaggcaactcctcaggatagtcaagaaggaacatttgggtca
gagcattccgtgtcaccatcacaagggagcagtcaacagcatttccttgaacctgaagca
aatttggatgattccatagatattcagcagcaggatatggatatagatgaagggcaagat
ggagtggaagaggagatctttgaacaggaagcaaagaaagtggctgttcgctcaagatca
agaacgcattcacgatctcgttcaagatcaccaagaaaacgaaggtctaggtcacgatct
ggttctcgaaagcgtaaacacagaaagcgatcacgctctcgctctagagaaagaaaaagg
aaatcatcacgttcatactcaagtgaaagaagagctagagaaagggagaaagaacgacag
aagaaaggattgcctccaattagatctaaaacattaagtgtatgtagtactactctgtgg
gttggtcaggtagacaagaaggcgacccagcaagatttaaccaacctgtttgaagagttt
ggacagattgaatccattaatatgattcctcccaggggctgtgcttatgtctgcatggtt
catcgacaagatgcatttcgggctcttcagaaacttagttccgggtcatataaaattggg
tccaaggtcattaagattgcttgggctttaaacaaaggcgtgaaaacagaatacaaacaa
ttctgggatgtggatcttggagtaacatacataccatgggaaaaagttaaagtggatgac
ttggaaggttttgcagaaggaggcatgattgatcaggaaactgtaaatactgagtgggaa
agtgtgaaaagctcagaacccgttaaagagacggtccagacaactcagagcccacctcca
gttgaaaaggagacagtggccacaacccaggcagaggtcttcccgccgcctgttgctatg
ttacagattccagtagctccagcagtgcctacagttagtttagtcccaccagcctttcct
gtgtcaatgcaagttcctcctcctggattcagtccaattcctccaccgccttttctccgc
gcgagttttaacccttcacaaccacctcctggtttcatgccacctccagttccaccacct
gttgtaccaccacctactattccaccagtagtaccaacatctttagtgcagccgccatta
tctatgactccagaaactgtgaaagatgttggatttggtagccttgttttgccaggtggt
tctgttgccagcagtcttgctacttccactctgccagctggaagtgtttttaatcctcca
actaaacaagcagagcctgaagaaaaagtacctcatcttatagaccaccagatttcttct
ggtgaaaacaccagatcagtgattccaaatgatgtttcaggtggctctgcgattttagga
ggacagccgccaaatgtgacgaacaattctggaattctgggagtccaaagaccaaatgta
tcaagtaataatgaaattcttggagtccggccatctaatgtttccaatagttctgggatt
attggagcccagccaccaaatattctaaataactctggcattttgggaatacagccacca
agtgtgtcgagtagttctggacttctgggcatgcttcccccgaatatacctaacaattcc
ggacttataggagtacagccacccggtgttccaaatactcctggacttttgggaacacag
ccaccagctgggcctcaaaatttaccccctttaaatctttctaatcaaaggatgcctgca
atgccaatgttagacattcgtccaggactaataccacagacacctggaccaagattccct
ttaatgcagcctggaattccacctcagcggggactccctcccccagcggtacttgatgca
gctcttcatccaccaccccgtggtccttttgctccaggagatatttttagtccacctgaa
agaccttttctagttcctggaagacaaagtgtagacaatgttgctaatccagagaaaagg
gtaccacttgggagtgatagcgttcaacaggaaggagatagagattaccggtttcctccc
gtagaaaccagggaaaccattagtagacctcccccggtggatgttagggatgtggttgga
cggcctgtagacccaagagaaggtcctggaaggcctccattagatggtagagatcatttt
ggaagacctcctgtagatattagagagaatctggtgaggccaggcatagatcatcttggt
cgaagagaccactttggctttactccagagaagccctgggggcatagagattttgacgag
agagagcatcgggttctgcctgtctatggtggtccaaaaggcttacatgaagaaagaggt
agatttcggtctggaaactaccggttcgatcctagaagtggtccttggaacagaggattt
ggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcaaagggat
agggatgacagagattttgatttctgcagagaaattaacggaaatcgttttggacgagag
agaattcaaaacacctgggtcccccctcctcatgctcgggtttttgatttttttgaaggg
gccacttctcagcgaaaaggtgataatgtgcctcaggttaatggtgaaaacaccgagaga
catgctcatccaccacctttaccagcgcagagtgatcctgaactttatgaaaaactgaca
tcttcaagtgaaataaacaaggagaagagtgacacagttgctgatatagagagtgaacca
gtggtagaaagcacagaaactgaggggacataa
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integrated database retrieval system
