KEGG   Balaenoptera musculus (blue whale): 118905859
Entry
118905859         CDS       T09887                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
bmus  Balaenoptera musculus (blue whale)
Pathway
bmus04512  ECM-receptor interaction
bmus04514  Cell adhesion molecule (CAM) interaction
bmus04820  Cytoskeleton in muscle cells
bmus05144  Malaria
bmus05205  Proteoglycans in cancer
bmus05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:bmus00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118905859 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    118905859 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118905859 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    118905859 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    118905859 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    118905859 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bmus04131]
    118905859 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:bmus04090]
    118905859 (SDC1)
   00535 Proteoglycans [BR:bmus00535]
    118905859 (SDC1)
Membrane trafficking [BR:bmus04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    118905859 (SDC1)
CD molecules [BR:bmus04090]
 Proteins
  118905859 (SDC1)
Proteoglycans [BR:bmus00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   118905859 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1
Other DBs
NCBI-GeneID: 118905859
NCBI-ProteinID: XP_036728647
UniProt: A0A8C0DGE5
LinkDB
Position
13
AA seq 320 aa
MRRPALWLWLCALALRLQPALPQTVAINVPPEDQDGSGDDSDNFSGSGAGALPDITLSQQ
TPSTWKDKGLLTAMPTAPEPSRPDTTATSTSTSTSILPTGEQPEEGGVVLLAEVEPGLTA
QEKEATHPPSETTLHPTTHRASTARATTAQGPATSQGPATSHPHRDVQPDHHETSAPTGH
GQPEPQAPSVEDGGSSATEKAAEDEASTQLPGGEDSEEQDFTFDVSAENSAGATVEPGQR
NGPPGDPGATGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEE
PKQANGGAYQKPSKQEEFYA
NT seq 963 nt   +upstreamnt  +downstreamnt
atgaggcgcccggcgctctggctctggctctgcgcgctggcgctgcgcctgcagccggcc
ctcccgcaaactgtggctataaatgtgccccccgaagatcaggatggctctggagatgac
tcggacaacttctctggctcgggcgcaggtgctctgccagatatcaccttgtcacagcag
accccctccacctggaaggacaaggggctcctgacggccatgcccacggctccagagccc
agccgcccggacaccaccgccacctccacctccacctccacctccatcctgccgactgga
gaacagcctgaggagggaggggtggtgctcctggcagaggtggaacctggcctcaccgcc
caggagaaggaggccacccacccacccagtgagaccacgctgcacccaaccacccaccgg
gcatcaacagccagagccaccacggcccaggggcctgccacctcccaggggcctgccacc
tcccatccccacagggacgtgcagcctgaccaccacgagacctcagctcccacaggtcac
ggtcagcccgagcctcaggctcccagcgtggaggatggaggttcttctgccactgagaag
gctgctgaggatgaagcctccacccagctcccgggaggggaggactctgaggagcaggac
ttcacctttgacgtgtccgcggagaactcagccggggcgactgtggaacctggccagcgg
aatgggcccccaggggatcctggggccacgggagcctcgcagggcctcctggacaggaag
gaagtgctgggaggggtcattgccggaggcctcgtgggactcatctttgctgtgtgcctg
gtgggtttcatgctgtaccggatgaagaagaaggacgagggcagctactccttggaggag
ccgaaacaagccaatggtggggcctaccagaagcccagcaagcaggaggagttctacgcc
tga

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