Balaenoptera musculus (blue whale): 118905859
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Entry
118905859 CDS
T09887
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus04512
ECM-receptor interaction
bmus04514
Cell adhesion molecule (CAM) interaction
bmus04820
Cytoskeleton in muscle cells
bmus05144
Malaria
bmus05205
Proteoglycans in cancer
bmus05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118905859 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
118905859 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118905859 (SDC1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
118905859 (SDC1)
09174 Infectious disease: parasitic
05144 Malaria
118905859 (SDC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
118905859 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bmus04131
]
118905859 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
bmus04090
]
118905859 (SDC1)
00535 Proteoglycans [BR:
bmus00535
]
118905859 (SDC1)
Membrane trafficking [BR:
bmus04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
118905859 (SDC1)
CD molecules [BR:
bmus04090
]
Proteins
118905859 (SDC1)
Proteoglycans [BR:
bmus00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
118905859 (SDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Romo1
Motif
Other DBs
NCBI-GeneID:
118905859
NCBI-ProteinID:
XP_036728647
UniProt:
A0A8C0DGE5
LinkDB
All DBs
Position
13
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AA seq
320 aa
AA seq
DB search
MRRPALWLWLCALALRLQPALPQTVAINVPPEDQDGSGDDSDNFSGSGAGALPDITLSQQ
TPSTWKDKGLLTAMPTAPEPSRPDTTATSTSTSTSILPTGEQPEEGGVVLLAEVEPGLTA
QEKEATHPPSETTLHPTTHRASTARATTAQGPATSQGPATSHPHRDVQPDHHETSAPTGH
GQPEPQAPSVEDGGSSATEKAAEDEASTQLPGGEDSEEQDFTFDVSAENSAGATVEPGQR
NGPPGDPGATGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEE
PKQANGGAYQKPSKQEEFYA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcccggcgctctggctctggctctgcgcgctggcgctgcgcctgcagccggcc
ctcccgcaaactgtggctataaatgtgccccccgaagatcaggatggctctggagatgac
tcggacaacttctctggctcgggcgcaggtgctctgccagatatcaccttgtcacagcag
accccctccacctggaaggacaaggggctcctgacggccatgcccacggctccagagccc
agccgcccggacaccaccgccacctccacctccacctccacctccatcctgccgactgga
gaacagcctgaggagggaggggtggtgctcctggcagaggtggaacctggcctcaccgcc
caggagaaggaggccacccacccacccagtgagaccacgctgcacccaaccacccaccgg
gcatcaacagccagagccaccacggcccaggggcctgccacctcccaggggcctgccacc
tcccatccccacagggacgtgcagcctgaccaccacgagacctcagctcccacaggtcac
ggtcagcccgagcctcaggctcccagcgtggaggatggaggttcttctgccactgagaag
gctgctgaggatgaagcctccacccagctcccgggaggggaggactctgaggagcaggac
ttcacctttgacgtgtccgcggagaactcagccggggcgactgtggaacctggccagcgg
aatgggcccccaggggatcctggggccacgggagcctcgcagggcctcctggacaggaag
gaagtgctgggaggggtcattgccggaggcctcgtgggactcatctttgctgtgtgcctg
gtgggtttcatgctgtaccggatgaagaagaaggacgagggcagctactccttggaggag
ccgaaacaagccaatggtggggcctaccagaagcccagcaagcaggaggagttctacgcc
tga
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integrated database retrieval system