Balaenoptera musculus (blue whale): 118905980
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Entry
118905980 CDS
T09887
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118905980 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmus03021
]
118905980 (POLR1B)
Enzymes [BR:
bmus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
118905980 (POLR1B)
Transcription machinery [BR:
bmus03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
118905980 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF7757
Motif
Other DBs
NCBI-GeneID:
118905980
NCBI-ProteinID:
XP_036728996
UniProt:
A0A8B8Z7W1
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All DBs
Position
13:12075920..12100834
Genome browser
AA seq
1135 aa
AA seq
DB search
MDPGGRWRHLPSGPSLKHLTDPSYGIPREQQKPALQELTRAHVESFNYAVREGLSHAVQA
IPPFEFAFKDERISLTIVDAVISPPTVPKGSICKELNVYPAECRGRRSTYRGKLTADISW
AVNGISKGIIKQFLGYVPIMVKSKLCNLYNLPPKALIQHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMVRPKWKSRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFFPLGFALKALVSFSDYQIFQELIKGKEDDSFLRNSVSQMLRIVMEEGCSTQKQV
LSYLGERFRVKLSLPDWYPNEHAAEFLFSQCICIHLKSNTEKFYVLCLMTRKLFALAKGE
CMEENPDSLVNQEVLTPGQLFLMFLKEKLEAWLVSIKIAIDKKAQKTNVSLNTENLLKIF
NLGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAICEVVTQFVYTASIPALLCNLGVT
PVDGAPQRPYSECYPVLLDGVMVGWVDKELVPGIADSLRHFKVLREKRIPPWMEVVLIPM
TGKPSLYPGLYLFTTPCRLVRPVQNLELGKEELIGTMEQIFMNVAVFEDEVLAGVTTHQE
LFPHSLLSVIASFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTFQARSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSECID
LSEKIKQGDDSLVFGVKPGDPRILQKLDDDGLPFIGAQLQYGDPYYSYLNLNTGESFVMY
YKSKENCIVDNIKVCSNDTGNGKFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPVE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENPALE
YFGATLKAAGYNYYGTERLYSGTSGLELDADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTLCNRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDIV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggcggccggtggcggcacctacccagcgggcccagcctaaagcacttgacc
gacccctcttacgggatcccgcgggagcagcaaaagccagcgttgcaggagctgacgcgg
gcgcatgtcgagtccttcaactacgctgtgcgcgaggggctcagccacgcggtgcaggcc
atccctccctttgaatttgctttcaaagatgagcggatctctcttactattgtggatgct
gtcatcagtccacccacagttccaaaagggagcatctgtaaagagctcaatgtttatcca
gcagaatgccggggccgaaggagcacctaccggggaaagctgacagctgatatcagctgg
gcagtgaatggaatctcaaaaggaatcattaaacagtttcttggctatgttcccatcatg
gtgaaatccaagctttgcaacttatacaaccttcctccaaaagccctcatccagcaccac
gaggaagcagaggaaatgggaggctattttataatcaatggcatcgaaaaagtcatccga
atgttgattatgcctcgcagaaatttccccattgcaatggtaagaccaaaatggaaaagc
agagggcctggctatactcagtatggagtttcaatgcactgtgtgagagaagaacattcc
gctgtcaatatgaaccttcactacttggaaaatggcacggttatgttgaactttatttac
cggaaagaactgtttttttttcctttgggatttgcacttaaggcacttgtgagcttttcc
gattatcagatttttcaggagctcatcaaaggaaaggaagatgactctttcttgaggaac
tctgtttctcagatgttaaggattgtaatggaagagggatgttccacacaaaaacaggtc
cttagctatctgggtgaacgcttcagagtaaaactcagtcttcctgactggtacccaaat
gaacacgctgcagagtttctcttcagccagtgcatctgcatccacttgaaatccaacact
gaaaagttttatgtgctttgtctcatgacccggaagctctttgctttagccaaaggcgag
tgcatggaggagaatcctgacagtttagtgaatcaagaggtcctgacccccgggcagctc
ttcctcatgtttctgaaggaaaaattggaagcttggttagtatctattaaaatagctata
gacaagaaggctcagaagaccaacgtgtccttaaacactgaaaatttgctgaagattttt
aatctgggaacagaccttacaaaaccatttgaatatcttcttgctactgggaatctacgt
tctaaaacaggtcttggcttcctgcaagactccggactttgtgttgtggctgacaagctg
aacttcatacgctatctctcccatttccgctgtgtgcaccgaggggcagattttgccaag
atgcggaccaccacagtacgcaggctgctgccggagtcctggggtttcctctgccccgtg
cacacccccgacggggagccctgtggtctgatgaaccacttaaccgccatatgtgaggtc
gtcacacagtttgtgtatacagcatcgattccagctttgctctgcaacttgggcgtcact
ccagttgatggagctccacagaggccgtacagcgagtgctaccctgtcctgctggacggt
gtcatggttggctgggtggataaggagcttgttcctggcattgccgattctctccgacat
tttaaggttttgagagaaaaaagaattcctccctggatggaggtggtcctgatcccaatg
acaggaaaaccaagtctgtacccaggattgtaccttttcaccactccttgtagactggta
cggcctgtgcagaacttggaattgggcaaagaagaactaattggaactatggagcagatc
ttcatgaacgttgctgtctttgaggatgaggttttggctggagttaccacccaccaggag
ctcttccctcacagcctgctgagtgtgatcgccagcttcatccctttctctgatcacaac
cagagtccgagaaacatgtaccagtgccagatgggtaagcagactatgggctttccactc
ctcacttttcaagcccggtcagataataaactgtatcgtcttcagactccacaaagccct
ttagtgagaccatacatgtatgattattatgacatggataactatccgattgggacaaat
gccattgttgctgttatttcttacactggctatgatatggaagatgccatgattgtgaat
aaggcctcttgggaacgaggctttgcccatggaagtgtctacaagtctgagtgtatagat
ctgtctgaaaaaatcaaacaaggagatgatagtctggtgtttggagtcaaacctggtgac
ccacggattctgcagaagttggatgatgacggattgccatttattggagcacagctgcag
tatggagatccatattacagctacctgaacctcaacactggggaaagctttgtgatgtac
tataagagtaaagaaaattgtattgtggataacatcaaagtgtgcagtaatgacactgga
aatggcaaattcaagtgcgtttgcatcacgatgagagtccctcggaacccaactatcggg
gataaatttgccagtcgtcacgggcagaagggcatcttgagcagactgtggccagttgag
gacatgccattcactgagagcgggatggttccagacattctgttcaatcctcatggtttt
ccgtcccgcatgaccatcggtatgttgattgagagtatggcagggaagtctgcagctcta
catggtctctgccatgatgctactcccttcatcttctcagaggagaacccggccctggaa
tactttggtgcgacgttgaaggctgctggctacaactactatggcactgagaggttgtac
agtggcaccagcgggctagagctggatgcagacatcttcataggtgtggtttattaccaa
cgcttacgccacatggtctcagacaaattccaagttaggacaacaggagccagagacaaa
gtcactaaccagccgatcgggggaagaaatgtccagggtggaatccgttttggggagatg
gagcgggacgctcttttagcccatggtacgtcttttctccttcacgaccggctcttcaac
tgctcggatcggtctgtagcccacgtgtgtgtgaagtgtggtagtttgctctccccgctg
ttggagaagccacccccatcgtggtctgccatgcgcaacaggaagtacaactgtactctg
tgtaatcgcagtgacaccatcgacactgtctctgtgccttacgtctttcggtattttgta
gctgaactggcagctatgaacatcaaagtgaaactggatattgtttaa
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