Balaenoptera musculus (blue whale): 118906119
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Entry
118906119 CDS
T09887
Symbol
USP39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118906119 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bmus03041
]
118906119 (USP39)
Spliceosome [BR:
bmus03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
118906119 (USP39)
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
118906119
NCBI-ProteinID:
XP_036729312
UniProt:
A0A8C0DRB8
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Position
13:complement(14767517..14796776)
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AA seq
565 aa
AA seq
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MSGRSKRESRGSTRGKRESESRSSSARVRRERDRERETEAPSSRGSPVRVKREIEPASAR
EALAPVVPAVRVKREREAEEDSEPEREVRAKNGRMDSEDRRSRHCPYLDTINRSVLDFDF
EKLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYE
IIDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVL
QALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEML
QAVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKRKKTIVTDVFQGSMRIFTKKL
PHPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILA
KFNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDL
REYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQ
MITLSEAYIQIWKRRDNDETNQQGA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtccggccggtccaagcgggagtctcgtggttccacccgcgggaagcgcgagtccgag
tcgcggagcagctcggctcgtgtcagacgggagcgagatcgggagcgggagaccgaggct
ccgagctcccggggcagtccggtgcgcgtgaagcgagagatcgagccggcgagcgcgcgc
gaggccctggcgcccgtggtcccggcggtgcgggtgaagcgggagcgcgaggccgaggag
gactcggagcctgagcgggaggtgcgagcaaagaatggccgcatggattccgaggatcgg
aggagccgccactgcccctacctggataccattaacaggagtgtgctggactttgacttt
gagaaactgtgttccatctccctctcgcatatcaatgcatatgcctgtctggtgtgtggc
aagtactttcagggccggggtttgaagtctcacgcctacattcacagtgtccagtttagt
caccatgtcttcctcaacctccacaccctcaagttttactgcctcccagacaactatgag
atcatcgattcctcgctggaggatatcacgtatgtgttgaagcccactttcacaaagcag
cagatcgctaacttggacaagcaagccaagttgtcccgggcatatgatggcaccacttac
ctgcccggtatcgtgggcctgaataacataaaggccaacgactacgccaatgccgtcctt
caggctctgtctaacgttcctcctctccggaactacttcctggaagaagacaattataag
aacatcaagcgtcctcccggggatatcatgttcttgttggtccagcgttttggagagctg
atgagaaagctctggaaccctcgaaatttcaaggcacatgtctctccccatgagatgctt
caagctgtcgtcctttgcagcaagaagacttttcagatcaccaagcaaggggatggagtc
gactttctctcctggtttttgaatgctctacactcagctctggggggcacaaagaagaga
aaaaagactattgtgactgatgttttccagggttccatgaggatcttcactaaaaagctt
cctcatcctgatttgccagcagaagaaaaagagcagctgctccataatgatgagtaccaa
gagacgatggtggagtccacgtttatgtacctgacactggaccttcctactgccccgctc
tacaaggacgagaaggagcagctcattatcccccaggtgccgctcttcaacatcttggcc
aagttcaacggcatcactgagaaggaatataagacttacaaggagaactttctgaagcgc
ttccagctcaccaagctgcctccatatttaatcttttgtattaagcgattcactaagaac
aatttctttgtggagaagaatccgactattgtcaacttccctattacaaatgtggatctg
agagagtacttgtctgaagaagtacaggcagtgcacaagaataccacctacgacctcatc
gccaacattgtacacgacggcaagccctctgagggctcctaccggattcacgtgcttcat
catgggacaggcaaatggtatgaattacaagacctccaggtgactgacatccttccgcag
atgatcacactgtcggaggcttacatccagatttggaagaggcgagataacgatgaaacc
aatcagcagggggcttga
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