Balaenoptera musculus (blue whale): 118906453
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Entry
118906453 CDS
T09887
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
bmus
Balaenoptera musculus (blue whale)
Pathway
bmus01524
Platinum drug resistance
bmus03430
Mismatch repair
bmus05200
Pathways in cancer
bmus05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
bmus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
118906453 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118906453 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
118906453 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
118906453 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bmus03400
]
118906453 (MSH2)
DNA repair and recombination proteins [BR:
bmus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
118906453 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
118906453
NCBI-ProteinID:
XP_036729894
UniProt:
A0A8B8Z725
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Position
13:complement(50947473..51021149)
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AA seq
884 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHREDALLAAREVFKT
QGVVKYMGPAGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGVKMSAVDGQRQVGVGYVDSTQRKLGLCEFPD
NDQFSNMEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDIYQD
LNRLLKGKKGEQVNSAVLPEMENQVAVSSLCAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPNVIQA
LEKYEGKHQALLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLISAARDLGLDPGKQIKLDSSTQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEDAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCESAEVSMVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATRIRAFCMF
ATHFHELTALANQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECAKQKALELEEFQNIGKPQEYDEMEPAAKRCYLEREQGEKNY
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgctgcagctggagagcgcggccgaggtcggcttcgtg
cgcttcttccagggcatgccggagaagccgaccaccacggtgcgcctcttcgaccggggc
gacttctacacggcgcaccgggaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggggtggtcaagtacatggggccggcaggagcaaagactctggagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctagttcgtcagtacagagtt
gaagtttataagaatagagctggaaataaggcctccaaggagaatgattggtatttggca
tttaaggcttctccaggtaatctttctcagtttgaagacattctctttggtaacaacgat
atgtcagcttccattggtgttgtgggtgttaaaatgtctgcagttgatggccaaagacag
gttggagttgggtatgttgactccacacagaggaagctaggactgtgtgagtttcccgat
aatgatcaattctccaatatggaggctctcctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactgctggagacatgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagagctgacttttccacaaaagatatttatcaggac
ctcaaccggttgttgaaaggcaaaaagggagaacaggtgaatagtgctgtgttgccagaa
atggagaatcaggttgcagtttcttcattgtgtgcagtaatcaagtttttagaactctta
tcagatgattcaaactttggacagtttgaactgactacttttgacttcagccagtacatg
aaattggatattgcagcagtcagagcccttaaccttttccagggttccgttgaagatact
actggctctcagtctctggctgcattgctgaataaatgcaaaacccctcaaggacaaaga
ctggttaaccagtggattaagcagcctctcatggacaagaacagaatagaagagagatta
aatttagtagaagctttcgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgatttccagatcttaaccgacttgccaagaaatttcaaagacaagcagcaaac
ttacaagattgttaccgactctatcagggtgtaaatcaactccctaatgttattcaggct
ctggaaaaatatgaaggaaaacatcaggcattgttgttggcagtttttgtgactcctctt
attgatcttcgttctgatttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaacttgagtgaa
ttaagagaaataatggatgacttagaaaagaagatgcagtcaacattaataagtgcagct
agagatctaggcttggatcctggcaaacagattaaactggattccagcacacaatttgga
tattattttcgcgtaacatgcaaggaagaaaaagtccttcgtaataataaaaacttcagt
acagtagatatccagaagaatggtgttaaatttaccaacagtaaattgacttctctcaat
gaggagtataccaaaaataaaaccgaatatgaggacgcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccgatgcagacactcaatgatgtgttagct
cagctagatgctgttgtaagctttgctcatgtgtccaatggagcacctgttccatatgta
cggccggtcattttggagaaaggacaagggagaattatactgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgttcactttgaaaaagat
aaacagatgttccacatcattactggtcccaacatgggaggtaaatcaacatatattcgc
cagactggggtggtagttctcatggcccagattgggtgttttgtgccatgtgagtcagca
gaagtgtccatggtggactgcatcttggcccgggtaggtgctggtgacagtcagttgaaa
ggagtctccacattcatggctgaaatgttagaaactgcttctattctcaggtctgcaacc
aaagattctttaataatcatagatgaattgggaagaggaacctctacctatgacggattt
gggttagcgtgggctatatcagagtacattgcaacaaggatccgtgctttttgcatgttt
gcaacccattttcatgaacttactgccttggccaatcagataccaactgttaataatcta
catgtcacagcactaactactgaagagaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcagagttttgggattcacgttgccgagcttgctaatttccccaggcatgta
atagagtgtgctaaacagaaagccctggaactagaggagtttcagaatattgggaaacca
caagaatatgatgaaatggaaccagcagcaaagaggtgctatctggaaagagagcaaggt
gaaaaaaattattga
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