Burkholderia mallei SAVP1: BMASAVP1_0141
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Entry
BMASAVP1_0141 CDS
T00457
Name
(GenBank) RNA polymerase sigma-70 factor, ECF family
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bmv
Burkholderia mallei SAVP1
Pathway
bmv02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bmv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BMASAVP1_0141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmv03021
]
BMASAVP1_0141
Transcription machinery [BR:
bmv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BMASAVP1_0141
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
PhyR_sigma-like
HTH_7
HTH_29
GerE
HTH_40
DnaG_DnaB_bind
HTH_24
HTH_20
HTH_11
TnsD
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABM48693
LinkDB
All DBs
Position
II:complement(133706..134215)
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AA seq
169 aa
AA seq
DB search
MPANTLRLQREIAALYTGHRGWLHGWLSKKLGCGERAADLVHDTFIRLLARDEPIDAAEP
RAFLTTVAQHVLYNHWRRERLERAYLDALAQWPEAVAPSPETRAVLFETLVEVDRMLDGL
PAVVRRAFLLAQLDGMTHAQIAAELRVSLATVKRYLVKAGAQCYFAIAA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgccggccaacactttgcgtctgcagcgggagatcgctgcgctctataccggtcatcgc
ggctggctgcacggctggctgtcgaagaagctcggctgcggcgagcgcgcggccgatctg
gttcacgacacgttcatccgcctgctcgcacgcgacgagccgatcgacgcggccgagccg
cgcgcgttcctgacgaccgtcgcgcagcacgtgctgtacaaccactggcggcgcgagcgg
ctcgagcgcgcgtatctcgacgcgctcgcgcaatggccggaggcggtcgcgccgtcgccg
gagacacgcgccgtcctgttcgagacgctcgtcgaggtcgaccggatgctcgacgggctg
cccgccgtcgttcgccgcgcgttcctgctcgcgcagctcgacggcatgacgcacgcgcag
atcgcggccgagctgcgcgtgtcgctcgcgaccgtcaagcgctacctggtgaaagcgggc
gcgcagtgctacttcgcgatcgccgcatga
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integrated database retrieval system
