KEGG   Burkholderia mallei SAVP1: BMASAVP1_0375
Entry
BMASAVP1_0375     CDS       T00457                                 
Name
(GenBank) ATP-dependent helicase, DEAD/DEAH family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
bmv  Burkholderia mallei SAVP1
Brite
KEGG Orthology (KO) [BR:bmv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bmv03400]
    BMASAVP1_0375
Enzymes [BR:bmv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BMASAVP1_0375
    5.6.2.6  RNA 3'-5' helicase
     BMASAVP1_0375
DNA repair and recombination proteins [BR:bmv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BMASAVP1_0375
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr DEAD Helicase_C WH3_Lhr ResIII DprA_WH HTH_IclR
Other DBs
NCBI-ProteinID: ABM47846
LinkDB
Position
II:388192..392988
AA seq 1598 aa
MHATPARPAAGALDAFHPVVAAWFSDTFAAPTGAQALAWPHIKAGRSTLVAAPTGSGKTL
TAFLSALDDLVRDALAHDGALPDETLVVYVSPLKALSNDIHVNLEAPLAGIAAEIARRGL
PVPQIRTAVRTGDTTQAERVAHRKHAPHILVTTPESLYVLLSSESGRRMLASTRTVIVDE
IHALANAKRGSHLALSLERLDALVGRKLPRIGLSATQKPVEAVARFLVGGRDDAPLDCAI
VDTGHTRTRDLALELPPVPLEPVMANDVWERLYDRIAELAAAHRTTLVFVNTRRMAERAA
RHLADRLGADAIAAHHGSLAKEHRFDAEQRLKHGKLKLLVATASLELGIDIGDVELVCQL
GSPRGIAPFLQRVGRSGHHIGGVPKGRLFPLSRDELVECAALLDCVRLGELDVLRIPRAP
LDVLAQQLVAEVACREWDEHALYRCVTQAAPYATLARETFDEVLKMLAEGFTSRRGARAA
YLHRDVVAHTVRGRRGARLAAVTSGGTIPDNADYAVLLEPQGVNIGTVNEDFAVESLAGD
VFQLGNQSYRIIRIETGRVRVEDAHGQAPNIPFWLGEAPARSDELSAGVARLRARLDALL
AHGDAAGAGAALPVNAASAPAPEREAAAAGQGARARAAAPHGTSALARRALPAALPAAPP
AVCARAAPSAAAPSTAIPSAAAPTVAAMPVPPEAELRTEPRRLAPALAWLTGELGLDAEA
ARQIADYLARARAALGALPTQDTLVMERFFDESGGMQLVIHSPYGSRINRAWGLALRKRF
CRSFNFELQAAATDDALILSLSHAHSFALDEVWRYLRASSAEHVLIQALLDAPLFAARWR
WNATTSLALPRFAGGRKVAPQLQRMKSEDLLATVFPDQVACAENIVGEREVPKHPLVDQT
LDDCLHDAMDTEGWLALLRRIEAGDVALVARDLPAPSPLAAEILNAKPYAFLDDAPLEER
RTQAVLARRWSDPESADDLGALDAGAIEAVRDEAWPLVREPDEMHDALVGLACIADDEIA
SHDGWRACVAQLAAGGRAARLALAGGRGLWIAAERVACMRALYGADVALDPPLAPPPGFD
APWEPEAALVDVIRARLTGFGPVTAAALAAPLALPAASVAIALAALEREGYVMRGRFTPG
ARDDEWCERHLLARIHRYTVKRLRREIEPVELADFMRFLFHWQRVAPDTRGLGGDALAAV
VHQLEGFEAAASAWEDEILPARLADYVAGGLDEPCRAGKLTWTRLGAPAKAASAPVKTTP
VVLLPRRELAIWQALRDPAAQPALSARAERVRATLAAYGAMFFDELAAHARLLPVELERA
LGELVAAGLVNADSFAGLRALLRPAAQRGAQRPSRARRGGALIGGMDDAGRWALVQRLPL
APLDFGEGGSEDEAANDDDAPSGDGTPGAGPEAARRGGVREDGAEADARIARAMRAAPPQ
AGRHAIAPAALEHVARTLLRRYGVAFWRLLACEAEWMPSWRELLPVYRRLEARGEIRGGR
FVAGLAGEQFALPDAIPILRELRRRPAEGLMLCVSGADPLNLTGTLLPGERVPALAGNRI
LFRDGVPIASLVGGQFAFARELDALAQDRARARLARHR
NT seq 4797 nt   +upstreamnt  +downstreamnt
atgcacgccactcccgcccgccctgccgccggcgcgctcgacgcgttccaccccgtcgtc
gccgcctggttctccgacacgttcgccgcgcccaccggcgcgcaagcgctcgcgtggccg
cacatcaaggccggccgctcgacgctcgtcgccgcgccgacgggctccggcaagacgctc
accgcattcctgtccgcgctcgacgatctcgtgcgcgacgcgctcgcgcatgatggcgcg
ctgcccgacgagacgctcgtcgtctacgtgtcgccgctgaaagcgctgtcgaacgacatt
cacgtgaacctcgaagcgccgctcgccggcatcgccgccgaaatcgcgcggcgcgggctg
ccggtgccgcaaatccgcaccgccgtgcgcaccggcgacacgacccaggccgagcgcgtc
gcgcatcgcaagcacgcgccgcacattctcgtcacgaccccggaatcgctgtacgtgctg
ctgtcgtccgaatcgggccggcgcatgctcgcgagcacgcgcaccgtgatcgtcgacgaa
atccacgcgctcgcgaacgccaagcgcggcagccatctcgcgctgtcgctcgagcggctc
gacgcgctcgtcggccgcaagctgccgcgcatcgggctgtccgcgacgcaaaagccggtc
gaggcggtcgcgcgctttctcgtcggcggccgcgacgacgcaccgctcgattgcgcgatc
gtcgacaccggccacacgcgcacgcgcgatctcgcgctggaattgccgcccgtgccgctc
gagcccgtgatggcgaacgacgtgtgggagcgcctctacgatcgcatcgcggagctggcc
gccgcgcaccgcacgacgctcgtgttcgtcaacacgcgccggatggccgagcgcgcggcc
cgccatctggcggacaggctcggcgcggacgcgatcgccgcgcaccacggcagcctcgcg
aaggaacatcgcttcgacgccgagcagcgcctgaagcacggcaaactcaagctgctcgtc
gccacggcctcgctcgagctcggcatcgacatcggcgacgtcgagctcgtctgccagctc
ggctcgccgcgcggcatcgcgccgttcctgcagcgcgtcgggcgctccgggcaccatatc
ggcggcgtgccgaaggggcggctctttccgctgtcgcgcgacgaactcgtcgaatgcgcg
gcgctcctcgattgcgtgcggctcggcgaactcgacgtgctgcgcattccgcgcgcgccg
ctcgacgtgctcgcgcagcagctcgtcgccgaagtcgcctgccgcgaatgggacgagcac
gcgctctatcgctgcgtgacgcaggccgcgccctacgcgacgctcgcgcgcgagacgttc
gacgaggtgctgaagatgctcgccgagggcttcacgagccggcgcggcgcgcgcgccgcg
tacctgcaccgcgacgtcgtcgcgcacacggtgcgcgggcggcgcggcgcgcggctcgcg
gccgtcacctcgggcggcacgattcccgataacgccgactacgcggtgctgctcgagccg
cagggcgtgaacatcggcaccgtcaacgaggatttcgcggtcgaaagcctcgcgggcgac
gtgttccagctcggcaaccagtcgtaccggatcatccggatcgagacggggcgcgtgcgc
gtcgaggatgcgcacgggcaggcgccgaacatcccgttctggctcggcgaggcgcccgcg
cgcagcgacgagctgtcggcgggcgtcgcgcggctgcgcgcgcggctcgacgcgctgctc
gcgcacggcgatgcggccggcgcgggtgcggccttgccggtgaacgccgcatccgcgccg
gcgcccgagcgcgaagcggccgcggccggccaaggcgcgcgtgcgcgcgccgccgcgccg
cacggcacgtccgccctcgcgcgccgcgctttgcccgctgcgctgcccgccgcaccgccc
gccgtctgcgcgcgcgccgccccatccgccgccgccccgtctaccgccatcccgtccgcc
gccgcgccgaccgtcgccgcgatgccggtcccccccgaggcggaactccgcaccgagccg
cgtcgcctcgcgcccgcgctcgcgtggctcacgggcgagctcggcctcgatgccgaagcc
gcgcggcagatcgccgattacctcgcgcgcgcccgcgcggcgctcggcgcgctgccgacg
caggacacgctcgtgatggagcgcttcttcgacgaatcgggcggcatgcagctcgtgatc
cattcgccgtatggctcccggatcaaccgcgcgtggggcctcgcgctgcgcaagcgcttc
tgccgcagcttcaacttcgagctgcaggcggccgcgaccgacgacgcgctgatcctgtcg
ctgtcgcacgcgcacagcttcgcgctcgacgaggtgtggcgctacctgcgcgcgtcgagc
gccgagcacgtgctgatccaggcgctgctcgacgcgccgctgttcgccgcgcgctggcgc
tggaacgcgacgacgtcgctcgcgttgccgcgcttcgccggcggccgcaaggtcgcgccg
caactgcagcggatgaagagcgaggatctgctcgcgacggtgttccccgatcaggtcgcg
tgcgcggagaacatcgtcggcgagcgcgaggtgccgaagcacccgctcgtcgaccagacg
ctcgacgactgcctgcacgacgcgatggacaccgagggctggctcgcgctgctgcggcgg
atcgaggcgggcgacgtcgcgctcgtcgcgcgcgatctgcccgcgccttcgccgctcgcc
gccgagatcctgaacgcgaagccgtacgcgttcctcgacgatgcgccgctcgaggagcgc
cgcacgcaggcggtgctcgcgcggcgctggagcgacccggaatcggccgacgatctcggc
gcgctcgacgcgggcgcgatcgaagcggtgcgcgacgaggcgtggccgctcgtgcgcgag
cccgacgagatgcacgatgcgctcgtcgggctcgcgtgcatcgccgacgacgaaatcgcg
tcgcacgacggctggcgcgcgtgcgtcgcgcagctcgcggcgggcgggcgcgcggcgcgg
ctcgcgctcgcgggcggccgcgggctgtggatcgcagccgagcgcgtcgcgtgcatgcgc
gcgctgtacggcgcggacgtcgcgctcgacccgccgctcgccccgccgcccggcttcgat
gcgccgtgggagcccgaggccgcgctcgtcgacgtgatccgcgcgcgcctcacgggtttc
gggccggtcacggccgccgcgctcgccgcgccgctcgcgctgcccgccgcgtcggtcgcg
atcgcgctcgccgcgctcgagcgcgagggctacgtgatgcgcgggcgcttcacgccgggc
gcgcgcgacgacgaatggtgcgagcggcacctgctcgcgcgcatccatcgctatacggtc
aagcgcctgcggcgcgagatcgagcccgtcgagctcgcggatttcatgcgcttcctgttt
cattggcagcgcgtcgcgcccgacacgcgcggcctgggcggcgacgcgctcgcggcggtc
gtccaccagctcgaaggtttcgaggcggccgcgagcgcgtgggaggacgaaatcctgccc
gcgcggctcgccgactacgtggcgggcggcctcgacgagccgtgccgcgccggcaagctg
acgtggacgcggctcggcgcgccggcgaaggccgcgagcgcgccggtgaagacgacgccc
gtcgtgctgttgccgcgccgcgagctcgcgatctggcaggcgctgcgcgatccggccgcg
cagccggcgctgtcggcacgcgccgaacgcgtgcgcgcgacgctcgccgcgtacggcgcg
atgttcttcgacgaactggccgcgcacgcgcggctgctgcccgtcgagctcgaacgcgcg
ctcggcgagctcgtcgccgcgggcctcgtcaacgcggacagcttcgcgggcctgcgcgcg
ctgctgcggccggccgcgcagcgcggcgcgcagcggccgtcgcgcgcacggcgcggcggc
gcgctgatcggcgggatggacgacgcggggcgctgggcgctcgtgcagcggctgccgctc
gcgccgctcgattttggcgagggcggcagcgaagacgaagccgcaaatgatgacgatgcc
ccgtccggcgacggcacgcccggcgccggccccgaagccgcgcgccgcggcggcgtgcgc
gaagacggcgccgaagccgatgcccgcatcgcgcgcgcgatgcgggccgcgccgccgcaa
gcgggccgccatgcgatcgcgcccgccgcgctcgagcacgtcgcgcgcacgctgctgcgc
cgctacggcgtcgcgttctggcgcctcctcgcatgcgaggccgaatggatgccgagctgg
cgcgagctgctgcccgtctatcggcggctcgaggcgcgcggcgaaatccgcggcggccgc
ttcgtcgcgggcctcgcgggcgaacagttcgcgctgcccgacgcgatcccgatcctgcgc
gagctccgccgccggccggccgaagggctgatgctgtgcgtgagcggcgccgatccgctc
aatctgacgggcacgctgctgcccggcgaacgcgtgcccgcgctcgcgggcaaccggatc
ctgttccgcgacggcgtgccgatcgcctcgctcgtcggcgggcagttcgcgttcgcgcgc
gaactcgacgcgctcgcgcaggaccgcgcgcgggcgcgactcgcgcggcatcggtaa

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