Burkholderia mallei SAVP1: BMASAVP1_A0415
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Entry
BMASAVP1_A0415 CDS
T00457
Name
(GenBank) ribonuclease II (RNB) family protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
bmv
Burkholderia mallei SAVP1
Brite
KEGG Orthology (KO) [BR:
bmv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bmv03016
]
BMASAVP1_A0415
Enzymes [BR:
bmv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BMASAVP1_A0415
Transfer RNA biogenesis [BR:
bmv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BMASAVP1_A0415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
TMEM61
Motif
Other DBs
NCBI-ProteinID:
ABM51927
LinkDB
All DBs
Position
I:complement(408340..410418)
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AA seq
692 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAAGELMQQADEA
AQQIDLDFLWECAPAEEFAYAALADEYFGASYGPVERAALVLRLHGAPVYFRRKGRGQYQ
RAPEEQLKMALAGLERKRQQALVQAGYEEELKAGRLPDAFAGKALGLLTKPDKNSIEYKA
LDAAALARGVSPARLMLDCGGIPSARALHEARFLAEYFPHGTGFLAVAVGKLPEDLPRAD
VNAFSIDDITTTEIDDAFSVEHLSDGRVRIGVHIAAPALGIVRGDAVDAIARARLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVKRDTQEIVANETRAEYVYVKSNLRHNT
LDELVTEDALAAGTGDYPHKDDIAALWPLAQALFERRQVARAGYGLKREVQRNTDYNFYV
EGEHVSITPRRRGSPLDLIVSELAILANSTWGAFLHDHSVPGIYRTQRAFGMPSGPKRTR
MQTSAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKQKDADLYA
VVQGFDDTYAAYADHQRRMEYFWCLRWIKQEGRKQVSATVVKGELVRLDEVPLLLHVPAL
GVHARGTRVLLDVMSVDELTIEASVRLVSVLDAPMVSSGEPADEDEDADAADETLLDAAD
ESAQGEAEALAEAGGAASGNGESSANGEEQSK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgaattgccgggcggccggcgcgcgaaggtgcgcgcgaaggac
gtgctgatcgaattcgagaagcccgcggcgggcgagctgatgcagcaggcggacgaagcc
gcccaacagatcgatctggatttcctgtgggagtgcgcgcccgccgaggaattcgcgtat
gccgcgctcgccgacgaatatttcggcgcgagctacggccccgtcgagcgcgcggcgctc
gtgctgcgcctgcacggcgcgcccgtctacttccgccgcaaggggcgcggccagtatcag
cgcgcgcccgaggagcagctgaaaatggcgctggccgggctcgagcgcaagcgccagcag
gcgctcgtgcaagccggctacgaggaggagctgaaggcgggcaggctgcccgacgcgttc
gcgggcaaggcgctcggcctgctgacgaagccggacaagaactcgatcgaatacaaggcg
ctcgatgcggcggcgctcgcgcgcggcgtgtcgccggcgcgcctgatgctcgactgcggc
ggcattccgtcggcgcgcgcgctgcacgaggcgcgctttctcgccgaatacttcccgcac
ggcacgggctttctggccgtcgcggtcggcaagctgcccgaggatctgccgcgcgcggac
gtcaacgcgttctcgatcgacgacatcacgacgaccgaaatcgacgacgcgttctccgtc
gagcacctgtccgacgggcgcgtgcggatcggcgtgcacatcgcggcgcccgcgctcggc
atcgtgcgcggcgatgcggtcgacgcgatcgcgcgcgcgcggctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtgttcacgctgaaggag
ggcgattaccgcccggcgctgtcgctgtacatcatcgtcaagcgtgacacgcaggaaatc
gtcgcgaacgagacgcgcgccgaatacgtctatgtgaagagcaacctgcggcacaacacg
ctcgacgagctcgtcaccgaggacgcactcgcggcgggcacgggcgattatccgcacaag
gacgacatcgcggcgctctggccgctcgcgcaggcgctcttcgagcgacgccaggtcgcg
cgcgcgggctacgggctcaagcgcgaagtgcagcgcaacaccgattacaacttctacgtc
gaaggcgagcacgtgtcgatcacgccgcgccggcgcggctcgccgctcgatctcatcgtg
tccgagctcgcgatcctcgcgaactcgacatggggcgcgttcctgcacgatcacagcgtg
ccgggcatttaccgcacgcagcgcgcgttcggcatgccgagcgggccgaagcgcacgcgc
atgcagacgagcgccgcgccgcacgaggggctcggcgtgccgcagtacgcgtggagcacg
tcgccgctgcgccgctacgtcgacctcgtcaaccagtggcaactgctcgcgtgcgtgcag
cacggcgtcaccgcgaagctcgccgccccgttcaagcagaaggatgcggatctgtacgcg
gtcgtgcagggtttcgacgacacgtacgccgcgtacgccgaccaccagcgccggatggag
tatttctggtgcctgcgctggatcaagcaggaaggccgcaagcaggtgagcgcgaccgtc
gtgaagggcgagctcgtgcgcctcgacgaagtgccgctgctgctgcacgtgcccgcgctc
ggcgtgcatgcgcgcggcacgcgggtgctgctcgacgtgatgtcggtcgacgagctgacg
atcgaggcgtcggtacggctcgtgagcgtgctcgatgcgccgatggtgtcgagcggcgag
ccggccgacgaagacgaggacgccgacgcggccgacgagacgctgctcgacgccgccgac
gaatcggcgcaaggcgaagcggaagcgctcgccgaggcgggcggcgcggcgagcggcaac
ggcgaatcgtccgcgaacggcgaggaacaatcgaaatga
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