Burkholderia mallei SAVP1: BMASAVP1_A1040
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Entry
BMASAVP1_A1040 CDS
T00457
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bmv
Burkholderia mallei SAVP1
Pathway
bmv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bmv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BMASAVP1_A1040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmv03019
]
BMASAVP1_A1040
Enzymes [BR:
bmv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BMASAVP1_A1040
Messenger RNA biogenesis [BR:
bmv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BMASAVP1_A1040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
aq_1923
Motif
Other DBs
NCBI-ProteinID:
ABM51319
LinkDB
All DBs
Position
I:1020859..1022307
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AA seq
482 aa
AA seq
DB search
MSDSVAKPVDATFDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTG
KTASFSLPIIQRLLPQANTSASPARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAV
VFGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLP
DLQRILNLLPKERQTLLFSATFSPEIKKLASTYLRNPQTIEVARSNAAASTVTQIVYDVA
EGDKQAAVVKLIRDRSLKQVIVFCNSKIGASRLARQIERDGIIAAAIHGDRSQSERMQAL
DAFKRGEIEALVATDVAARGLDIAELPAVINFDLPFNAEDYVHRIGRTGRAGASGDALSL
CSPNERKQLADIEKLIKRTLSLETLALDLPRHRHDDRGGRRERDRDERRGAPAGRRSAGG
ERTHHPRREAPIDDFFLKPYVPSPSANQPDEAKPVQPEKKAPKQPLAALLGGFGMPRKTS
SS
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctgttgccaagcctgtcgacgcgacgttcgatcaattcggccttgccgcc
gagatcctgaaggcgattgccgagcagggctatacgacgccgacgccgatccaggcgaag
gcgattcccgtcgtgctgtccggccgcgacgtgatgggcgccgcgcagaccggcaccggc
aagaccgcgagtttctcgctgccgatcatccagcggctgctgccgcaggcgaacacgagc
gcgtcgcccgcgcgccacccggtgcgcgcgctgatcctcacgccgacccgcgagcttgcc
gatcaggtcgccgcgaacgtgcacgcgtatgcgaagcacacgccgctgcgcagcgcggtc
gtgttcggcggcgtcgacatgaacccgcaaatggccgagctgcgccgcggcgtcgagatc
ctgatcgcgacgcccgggcgcttgctcgatcacgtccagcagaagaccgcgaatctcggc
caggtgcagatcctcgtgctcgacgaggccgaccggatgctcgacatgggcttcctcccc
gatctgcagcgcatcctgaacctgctgccgaaggagcgtcagacgctgcttttctcggcg
acgttctcgcccgagatcaagaagctcgcgtcgacctacctgcgcaatccgcagacgatc
gaggtcgcgcgcagcaacgcggccgcgtcgaccgtcacgcagatcgtctacgacgtcgcc
gaaggcgacaagcaggcggccgtcgtcaagctgatccgcgaccgctcgctcaagcaggtg
atcgtgttctgcaacagcaagatcggcgcgagccgccttgcgcgccagatcgagcgcgac
ggcatcatcgcggccgcgattcacggcgaccgctcgcagagcgagcggatgcaggcgctc
gacgcgttcaagcgcggcgagatcgaagcgctcgttgcgaccgacgtcgccgcgcgcggc
ctcgacatcgccgaattgccggccgtcatcaatttcgacctgccgttcaacgcggaagac
tacgtgcaccggatcggccgcacggggcgtgcgggcgcgtcgggcgacgcgctgtcgctg
tgcagcccgaacgagcgcaagcagctcgccgacatcgagaaactgatcaagcggacgctg
tcgctcgaaacgctcgcgctcgatctgccgcgccatcgccacgacgatcggggcggccgc
cgcgagcgcgaccgcgacgagcgccgcggcgcgccggccggccgccgttcggcgggcggc
gagcgcacgcatcatccgcgccgcgaagcgccgatcgacgattttttcctgaagccgtac
gtgccgtcgccgtccgcgaaccagccggacgaggcgaagcccgtgcagccggagaagaag
gcgccgaagcagccgctcgccgcgctcctgggcggattcgggatgccgcgcaagacgtcg
tcgtcgtga
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