Burkholderia mallei SAVP1: BMASAVP1_A2535
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Entry
BMASAVP1_A2535 CDS
T00457
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
bmv
Burkholderia mallei SAVP1
Pathway
bmv03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bmv00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BMASAVP1_A2535 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bmv03019
]
BMASAVP1_A2535 (orn)
03009 Ribosome biogenesis [BR:
bmv03009
]
BMASAVP1_A2535 (orn)
Messenger RNA biogenesis [BR:
bmv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BMASAVP1_A2535 (orn)
Ribosome biogenesis [BR:
bmv03009
]
Eukaryotic type
Pre-60S particles
RNases
BMASAVP1_A2535 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ABM49781
UniProt:
A1V6I4
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All DBs
Position
I:complement(2519472..2520077)
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AA seq
201 aa
AA seq
DB search
MTDISAVAGQPALVRNELNLVWLDMEMTGLDPDTDRIIEIAVVVTNSTLDIAVEGPVLAI
HQSDETLAKMDDWNKNTHGRSGLIDRVRASSVTEADAAAQIAAFLAEHVPPGKSPMCGNS
ICQDRRFMARWMPELERFFHYRNLDVSTLKELCRRWQPAIYKGFQKRAMHTALADIHESI
DELKYYRERFLIPAAPAGETA
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatatctccgccgtggccggccagcccgcgctcgttcgcaacgaactgaacctc
gtttggctcgacatggaaatgacgggcctggacccggacaccgaccgcatcatcgagatc
gccgtcgtcgtcaccaattcgaccctcgacatcgcggtcgaggggccggtgctcgcgatc
catcagagcgacgagacgcttgcgaagatggacgactggaacaagaacacccatggccgc
tcgggcctcatcgaccgcgtgcgcgcgtcgagcgtcaccgaggcggacgccgccgcgcag
atcgcggcgtttctcgccgagcacgtgccgcccggcaagtcgccgatgtgcggaaattcg
atctgccaggaccgccgcttcatggcgcgctggatgcccgagctcgaacgcttctttcat
taccgcaacctcgacgtgagcacgctcaaggagctgtgccggcgctggcagcccgcgatc
tacaagggtttccagaagcgcgcgatgcataccgcgctcgccgatatccacgagtcgatc
gacgagctcaagtattaccgcgagcgttttctgattccggccgcgccggcgggcgagacc
gcgtaa
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