Burkholderia mallei SAVP1: BMASAVP1_A2833
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Entry
BMASAVP1_A2833 CDS
T00457
Name
(GenBank) putative RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bmv
Burkholderia mallei SAVP1
Pathway
bmv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bmv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BMASAVP1_A2833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bmv03021
]
BMASAVP1_A2833
Transcription machinery [BR:
bmv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BMASAVP1_A2833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_28
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ABM50761
LinkDB
All DBs
Position
I:2812375..2813823
Genome browser
AA seq
482 aa
AA seq
DB search
MKVSARELRYEQGIDRLLELAGARDDTEYADVADEFASAPSSAFAHDLGEPDSLDHQASD
ESAGAGSFGDKPTRPAHGDTDVDTDWRDDDAPPSGSNDAAPVDTAASTDPLALFVRRMHA
VPLLTHAQEIALAAEIEAGREQVLQALAEALDRLDLASLPADPALGRARAALQRARARGD
EGARAFARARTAAYAALAAHGWPSAEVDAVRRAMRRLPTSPEKSDAGAQRAFADGEARIS
AATARMAEANLRLVLSIARKYASRGLDLADLLQEGNLGLLRAIEKFEHRRGFKFSTYATW
WIRQAISRAIAERARTIRVPVHVGDEARRVRKAADRIERRSGVSASLAELSEATGLPAER
LRAVLTLPREPRSLNAPLGDDDQAEFGDIVEDTSTPSLFDALAHGQMCDVVTSLLKTMSA
QEADILRRRFGIGGDEPWSYEQIAARAGVSREQVRRIEKRALQTLRVTAEACNAHDFLDV
QP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtctcagcgcgcgaattgcgctacgaacagggcatcgaccggttgctcgaactt
gccggcgctcgcgacgacacggaatacgccgatgtcgccgacgagttcgcgagcgcgccg
tccagcgcgttcgcgcatgatctcggcgagcccgattccctggatcaccaagcatccgac
gaaagcgcaggcgccggctcgttcggcgacaagccgacgcggcccgcgcacggcgacacc
gatgtcgacaccgactggcgtgacgacgatgcgccgccctccggatcgaacgacgccgcg
ccggtcgacaccgcggcctcgactgatccgctcgcgctcttcgtacgccggatgcacgcg
gtgccactgctgacgcacgcccaggaaatcgcgctcgccgccgaaatcgaggcgggacgc
gagcaggtgctgcaagcgctcgccgaagcgctcgaccggctcgacctcgcgtcgttgccg
gccgatccggcgcttggccgtgcgcgcgccgcgctgcagcgcgcacgcgcgcgcggtgac
gaaggcgcgcgcgcgtttgcccgcgcgcgcacggcggcatacgcggcgctcgccgctcac
ggctggccgtcggcggaagtcgacgcggtgcggcgggcaatgcgccggctgccgacatcg
ccggaaaagagcgacgcgggcgcgcaacgtgcgttcgcggacggcgaagcgcgcatctcg
gccgcgaccgcgcgaatggcggaagcgaacctgcggctcgtgctgtcgatcgcgcgcaag
tacgcgtcgcgcggcctggatctcgccgatctgctgcaggaaggcaacctcggcctgctg
cgcgcgatcgagaaattcgagcatcggcgcggcttcaagttttcgacgtatgcgacgtgg
tggattcgtcaggcgatttcgcgcgcgatcgccgagcgcgcacgcacgattcgcgtgccg
gttcatgtcggcgacgaagcgcgccgcgtgcgcaaggccgccgatcggatcgaacggcgc
agcggtgtaagcgcatcgctcgccgagctgtcggaggcgaccgggctgccggccgagcgg
ctgcgcgcggtgctgacgctgcctcgcgagccgcgctcgctgaacgcgccgctaggcgat
gacgaccaggccgaattcggcgacatcgtcgaggatacgtcgacgccgagcctgttcgat
gcgctcgcccacgggcagatgtgcgacgtcgtcacgtcgctgctgaaaacgatgtccgcg
caggaagccgacatcctgcgccggcgcttcggcatcggcggcgacgagccgtggagctac
gagcagatcgccgcgcgagcgggcgtgtcgcgcgagcaggtacgccgcatcgagaagcgc
gcgctgcagacgctgcgcgtgacggccgaagcgtgcaacgcgcacgacttcctcgacgtg
cagccgtaa
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