Burkholderia mallei SAVP1: BMASAVP1_A3397
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Entry
BMASAVP1_A3397 CDS
T00457
Symbol
hupB
Name
(GenBank) DNA-binding protein HU, form B
KO
K03530
DNA-binding protein HU-beta
Organism
bmv
Burkholderia mallei SAVP1
Brite
KEGG Orthology (KO) [BR:
bmv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmv03032
]
BMASAVP1_A3397 (hupB)
03036 Chromosome and associated proteins [BR:
bmv03036
]
BMASAVP1_A3397 (hupB)
03400 DNA repair and recombination proteins [BR:
bmv03400
]
BMASAVP1_A3397 (hupB)
DNA replication proteins [BR:
bmv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BMASAVP1_A3397 (hupB)
Chromosome and associated proteins [BR:
bmv03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BMASAVP1_A3397 (hupB)
DNA repair and recombination proteins [BR:
bmv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BMASAVP1_A3397 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF937
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ABM51204
LinkDB
All DBs
Position
I:3362855..3363133
Genome browser
AA seq
92 aa
AA seq
DB search
MNKQELIDAVAAQTGASKAQTGETLDTLLEVIKKAVSKGDSVQLIGFGSFGSGKRAARTG
RNPKTGETIKIPAAKTVKFTAGKAFKDAVNKR
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaggaactgatcgacgccgtcgccgcccagacgggcgccagcaaggctcaa
accggcgaaacgctggacacgctcctcgaagtgatcaagaaggctgtgtcgaaaggcgac
tcagttcaactgatcggcttcggcagcttcggctcgggcaagcgcgcagcgcgcaccggc
cgcaaccccaagacgggcgagaccatcaagatcccggcagccaagacggtcaagttcacg
gctggcaaggcgttcaaggacgcagtgaacaagcgctga
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