Halobacteriovorax marinus: BMS_0050
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Entry
BMS_0050 CDS
T01659
Symbol
dnaX
Name
(GenBank) DNA polymerase III, tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bmx
Halobacteriovorax marinus
Pathway
bmx03030
DNA replication
bmx03430
Mismatch repair
bmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMS_0050 (dnaX)
03430 Mismatch repair
BMS_0050 (dnaX)
03440 Homologous recombination
BMS_0050 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmx03032
]
BMS_0050 (dnaX)
03400 DNA repair and recombination proteins [BR:
bmx03400
]
BMS_0050 (dnaX)
Enzymes [BR:
bmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMS_0050 (dnaX)
DNA replication proteins [BR:
bmx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BMS_0050 (dnaX)
DNA repair and recombination proteins [BR:
bmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BMS_0050 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RuvB_N
AAA_5
AAA_22
AAA_16
AAA_30
AAA_24
AAA_14
DUF1048
nSTAND3
AAA_19
DNA_pol3_gamma3
RCF1-5-like_lid
TIP49
RNA_helicase
Mg_chelatase
TsaE
DUF6587
Motif
Other DBs
NCBI-ProteinID:
CBW24992
UniProt:
E1X1S3
LinkDB
All DBs
Position
53474..55342
Genome browser
AA seq
622 aa
AA seq
DB search
MSYQVLARKWRPKRFQDVIGQSHITKSLQNALSRNKLGHAYILTGTRGIGKTSVARIFAK
AIRCESRLEDSNACGTCESCQDFDSASSMNVVEIDGASNNSVDDIRDLIGNIQYLPTSGH
YKIYIIDEVHMLSTSAFNALLKTLEEPPAHAIFILATTEPEKLLGTVLSRCQRFDFRNAA
VADLSAHVKKIAESENIQFENDEIIKQICVQGKGSVRDTLSLLDQVLSFSEDGKVTEQSV
SFALGLAKTSVIIEIVSKIINGNRDEVVSLYKNLLNENISVKNICHSLLDEFYLFISQID
NPENLKKRWPLVDATQLESGEIFWIYESISKDVSWTLSSLSPENCTEIALQKVTLRNSFF
NKAANSKKKINNPEKTEEKTSTPVSIEDKPQVQEEKEIEVVAEVSVAVEESVSATTTPTD
GEEVKEETEEIDIKEEFSKMSSALENSPTVEIKTNELENKISKKEEILKEKSVEELPRDW
DGFLAYLFKVSPASSANLEQGNILSPLSLTDNSVSIEVGFPESSRVFLDYLKEQESFDKL
KDLVAKFFNVDVTKVNLQLAMVEEEKAIDSEFKSKAQLKQQEEDRIEEEKREKIRSNPFI
RKAETIFNSKVDKIIISKNENN
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcaagttcttgcaagaaaatggagaccaaagagatttcaggatgttataggt
caaagccacataacgaaatcacttcaaaatgccttatcgcgaaataagttggggcatgcc
tatattcttacgggaactcgtggaattggtaagacttctgtggccagaatttttgcgaag
gcgattcgctgcgaaagtagattagaagattccaacgcttgcggtacttgtgagagttgt
caggactttgattctgcaagctctatgaatgttgtagagattgatggggcatcaaataat
agtgttgatgatatccgtgatttaattggcaatattcaatacctaccaacaagtggtcat
tacaaaatttatataattgatgaagttcacatgctttcaacgagtgcattcaatgccttg
ttaaaaacgttagaggaaccaccagctcacgccatttttattttagcaacaacagagcct
gaaaaactactcggtacagttctttcaagatgtcagcgattcgattttagaaatgctgct
gttgcggatctttcggcccatgttaaaaaaattgctgagtctgagaatattcaatttgaa
aacgatgaaatcatcaagcaaatctgcgttcaaggaaagggttctgttagagatactctg
tctctcttagatcaggttttaagtttttcagaagacggaaaggttactgagcaaagtgta
tcgtttgctcttggtttggccaaaacgtctgtgataatagaaatcgtttcaaaaattata
aatggcaatagagatgaagtcgtaagtctttataagaatttattaaatgaaaatatttca
gttaagaatatttgtcattctctattggatgaattttatctcttcatttctcaaattgat
aatcctgagaatttaaaaaagagatggcctttagtcgatgcgactcaactagagtctggt
gaaatattttggatctatgaaagtatttctaaagatgtatcgtggacactctcttcttta
tcccctgaaaactgtactgagatagcactacaaaaagtaactcttagaaattcttttttt
aataaagcggctaactctaaaaaaaaaataaataatcctgagaagactgaagagaaaact
tctactccagtatcaattgaagataagcctcaagttcaagaagaaaaagaaattgaagtt
gttgcagaagtttctgtagctgttgaagaaagtgtaagcgctacgacaacaccaacagat
ggtgaagaagtaaaagaagaaactgaggaaatagatatcaaagaagagttctctaaaatg
agctctgccttagaaaatagtcctacggttgaaataaaaaccaatgaattagaaaataaa
atttctaaaaaagaagagatacttaaagaaaaatctgttgaagagctaccaagagattgg
gatggttttctcgcctatctatttaaagtatctccagcatcttcagcaaatttagagcaa
ggaaatattctctcacctttatcgttaacagataattctgtttccattgaagttggtttt
cctgagtcgagtagagttttcttagactatctaaaagagcaggagtcttttgataaatta
aaagatctagttgcaaaattcttcaatgttgatgtcacgaaagttaatttacaactggca
atggttgaagaagaaaaagcaatagattctgaatttaaatctaaggcccaactgaaacaa
caagaagaagatagaattgaagaagaaaaaagagaaaagattagaagtaacccttttata
agaaaggctgaaacaatctttaactctaaagtcgataaaataataatttcaaaaaatgaa
aataactag
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