Halobacteriovorax marinus: BMS_0277
Help
Entry
BMS_0277 CDS
T01659
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bmx
Halobacteriovorax marinus
Pathway
bmx03030
DNA replication
bmx03410
Base excision repair
bmx03420
Nucleotide excision repair
bmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BMS_0277 (polA)
03410 Base excision repair
BMS_0277 (polA)
03420 Nucleotide excision repair
BMS_0277 (polA)
03440 Homologous recombination
BMS_0277 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bmx03032
]
BMS_0277 (polA)
03400 DNA repair and recombination proteins [BR:
bmx03400
]
BMS_0277 (polA)
Enzymes [BR:
bmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BMS_0277 (polA)
DNA replication proteins [BR:
bmx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BMS_0277 (polA)
DNA repair and recombination proteins [BR:
bmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BMS_0277 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BMS_0277 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
CBW25205
UniProt:
E1X3B0
LinkDB
All DBs
Position
291832..294483
Genome browser
AA seq
883 aa
AA seq
DB search
MGINMAKNRLIIVDISSFIFRAFYAIRVLHSPEGVPVNAVHGVLSMLLKLLSKYQPSHIL
LARDTKGGSFRNELFDQYKANRSEPPEELKPQFDLIKQLIDHMELPSSTVEGFEADDLIG
SACVQWKSDFDEILIASGDKDLMQFVGDNIKMLDTMKDKTYDREGVFEKMGVYPEQIVDY
LSMVGDASDNIPGMKGIGAKGAAKLLAEHGTLEKCIEIKDTLKGKKLTTAFGEYLEDGLL
SKSLIEIKTDVDLGLKSTDSKFSFYPADSLFDFLRGLGFKSALVKLEDLKFAHHQSEQDG
EFSVNVDGPSIKVGEWSDAELECDTYLGLDVQYTNLDTRSLDIHSLSISKNKNEAFYIKE
EQAKPLLEKILTTDTLKVATADYKSLLYYSLRNEIEISAEVFDVVQAQFVANPGEKNTIE
SLSEKFLGSSIPAFEKKKPLPSENEEDLVQEISTARAHSCFRVSEFLLEELERKELLNVF
HDIDNKLTPVLAAMEYEGVHINKAFFSEYEKELQTKLDELQASVDKFSKEPVNLNSPKQV
GVLLFEELELPVGKKTKTGYSTDSSVLEDLAAKGLSEVPALILEYREVGKILSTYVKAIP
ELLNEASGKIHTHFNQNVAATGRLSSNHPNLQNIPIRSELGRRVRKGFIAGPGKILLAAD
YSQVELRLLAHFSNDKTMIDAFKKGVDIHRRTASEIMGVPVEEVGSNDRSKAKAVNFGLM
YGQSSFGLAAALKIPRKEAKEYITNYFERFSSVKGYLDHLKEECEKTGYAITLKGRKRYL
ADIHSTNRTIKANAERVAINSPIQGTAADIIKLAMINIQKVLDDKKLKSKMILQVHDELI
FEVVESELEEMKTILKDGMEKVVSLSVPLDVDMGVGVNWFDLK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgggaataaatatggccaaaaatcgtttaattatcgttgatattagtagttttatattt
cgtgctttctatgcaatacgcgttttacattcacctgagggcgttcctgtaaatgctgtt
cacggtgttttgtcgatgcttctaaaattactttcaaaatatcagccatctcatattctc
ttggcccgagatacaaagggtggatcttttagaaacgagctctttgatcagtacaaggcg
aataggtcagaaccacctgaagagttaaaacctcaattcgatcttataaagcaattgata
gaccatatggaacttccaagctctactgtagagggctttgaggccgatgacttaattggt
tccgcttgtgtgcaatggaagtctgactttgatgaaattctcattgcctctggcgataaa
gatcttatgcaatttgttggtgataatataaagatgttagacaccatgaaagataagacc
tacgaccgcgaaggtgtttttgagaaaatgggagtttatccagagcaaattgtagactac
ctctctatggttggggatgcttcagataatattccaggtatgaagggaattggtgctaag
ggtgctgctaaacttcttgccgagcatggaactttagaaaagtgtattgagattaaagat
actctaaaaggaaaaaagctaacgacagcttttggtgagtatttagaggatggacttctc
tcaaagagcctaattgaaatcaaaacagatgttgaccttggattaaagtcgacggactct
aaatttagtttctaccctgctgactctctctttgatttcttgagaggtcttggttttaag
tcagcacttgtaaagctagaggatttgaaatttgcacatcatcagtcagagcaagacgga
gagttctccgttaatgtcgatgggccaagtattaaagttggtgagtggagtgatgctgag
ttagagtgtgatacatacttaggcctagacgttcagtatacgaacctagatacgcgcagt
cttgatattcactcgctttctatttctaaaaataagaatgaagctttttatattaaagaa
gagcaggcaaagcctctcttagaaaagatcttaacgacagacactcttaaagtcgcaaca
gcagattataagtctctactttattactctctaagaaatgagatagaaattagtgctgag
gtttttgatgtcgttcaagcgcaatttgtggccaaccctggagagaagaacactattgaa
tctcttagcgaaaagtttcttggaagctctataccagctttcgagaagaagaagcctctt
ccaagtgaaaatgaagaagaccttgttcaagagatctcaacagcgagggcacactcatgt
tttagagtgagtgagttcttacttgaagagttagagagaaaagaacttcttaatgtcttt
catgatattgataataaacttactccagtcctagcggcaatggagtatgaaggtgttcac
attaataaagcattctttagtgagtatgaaaaagagctgcaaacgaagctagatgaactt
caagcaagtgtggataaattctctaaggagcctgttaatctgaattcaccaaagcaagta
ggggttctcttatttgaagagttagagcttccggtaggaaagaaaacaaagacaggctac
tctacagactcttctgtactagaagatttagctgcaaagggattaagtgaagttccagct
ctaattctagaatatagagaggtcggaaaaattctttctacctatgttaaggccattcca
gaattattgaatgaagcttctggtaagattcatacgcacttcaaccaaaatgttgcggcg
acaggtagactctcttctaatcatcctaatctacaaaatattccaattagaagtgagtta
ggtagaagagtgagaaaaggttttattgcaggtccaggaaagatcctcttggccgctgac
tactctcaagtagagcttagacttttggcacacttttcaaatgacaagacaatgatagac
gcttttaagaagggtgttgatattcatagaagaacagcttctgagataatgggcgtacca
gttgaggaagttggctctaacgatcgctctaaggccaaggccgtaaactttggactaatg
tatggacagtcatcatttggtctcgctgctgctttaaagattcctagaaaagaagctaag
gagtatattacaaattacttcgaaagattctctagcgttaagggttaccttgatcactta
aaagaagagtgtgaaaagactggctacgcaataacgctaaaaggaagaaagagatatctc
gcagatattcactcgaccaatagaacaattaaggccaacgcagaaagggttgccattaat
agcccaatccagggaacggcggcagatatcatcaagcttgcgatgattaatattcagaaa
gttctagatgacaaaaaacttaaatctaaaatgattctacaagttcacgatgagctaatc
tttgaagtggttgagagtgaattggaagagatgaaaactatccttaaggatggaatggaa
aaagtggtttctctatcagttcccttagatgtcgacatgggtgttggggttaattggttt
gatctaaaatag
DBGET
integrated database retrieval system
